H3H04, H3H04 (genetic_marker) Cicer arietinum | PulseDB

Marker Overview

Marker Overview


Name	H3H04
Genbank ID	N/A
Type	SSR
Species	Cicer arietinum
Germplasm	Hadas
Repeat Motif	(TTA)33 27 bp (TA)9 9 bp (TAA)3
Primer 1	H3H04.Forward primer: CACACAAATCAATATATAACGCAAT
Primer 2	H3H04.Reverse primer: GAAGATATTTATGTGTTGACCGATT
Product Length	216
Publication	[view all]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold379	supercontig	scaffold379:32539..32754 .
scaffold379	chromosome	scaffold379:32539..32754 .

Publications


Year	Publication
2005	Lichtenzveig J, Scheuring C, Dodge J, Abbo S, Zhang HB. Construction of BAC and BIBAC libraries and their applications for generation of SSR markers for genome analysis of chickpea, Cicer arietinum L. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2005 Feb; 110(3):492-510.

Germplasm


Stock Name	Type
Hadas	accession

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	chickpea-ILC588xILC3279-RIL	LG3	N/A	62	H3H04	View
2	chickpea-ICC4958xPI489777-RIL-2012	LG3	N/A	127.5	H3H04	View
3	chickpea-ICCV2xJG62-RIL-F10-2011	LGVI	N/A	69.1	H3H04	View
4	chickpea-ICC4958xPI489777-RIL-2012-2	LG2	N/A	131	H3H04	View
5	chickpea-ICC4958xPI489777-RIL-2015-2	LG3	N/A	56.75	H3H04	View
6	Chickpea-ICC4958/PI489777-RIL-2020	LG03	N/A	121.73	H3H04	View