H5A08, H5A08 (genetic_marker) Cicer arietinum | PulseDB

Marker Overview

Marker Overview


Name	H5A08
Genbank ID	N/A
Type	SSR
Species	Cicer arietinum
Germplasm	Hadas
Repeat Motif	(TTA)18 CCA (TTA)8 TT (TTA)3
Primer 1	H5A08.Forward primer: AGGAGAGAAAATGTAACATCCTAAATC
Primer 2	H5A08.Reverse primer: CAAATTGGTTATTGATTACAATTAGGT
Product Length	218
Publication	[view all]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ca1	chromosome	Ca1:44362580..44362788 .

Publications


Year	Publication
2005	Lichtenzveig J, Scheuring C, Dodge J, Abbo S, Zhang HB. Construction of BAC and BIBAC libraries and their applications for generation of SSR markers for genome analysis of chickpea, Cicer arietinum L. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2005 Feb; 110(3):492-510.

Germplasm


Stock Name	Type
Hadas	accession

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	chickpea-ICCV96029xCDCCorinne-F2	LG2	N/A	53.2	H5A08	View
2	chickpea-ICCV96029xCDCFrontier-F2	LG1	N/A	42.5	H5A08	View
3	chickpea-ICCV96029xCDCFrontier-F2	LG5	N/A	55	H5A08	View
4	chickpea-ICCV96029xCDCFrontier-F2-2007	LG1	N/A	42.5	H5A08	View
5	chickpea-ICCV96029xCDCFrontier-F2-2007	LG5	N/A	55	H5A08	View
6	chickpea-HadasxICC5810-RIL	LG2	N/A	27.4	H5A08	View
7	chickpea-ILC588xILC3279-RIL-F6	LG1	N/A	0	H5A08	View
8	chickpea-ICCV96029×CDCFrontier-F2-2017	CaLG02	N/A	5.3	H5A08	View
9	chickpea-ICC5810×CDCFrontier-F2-2017	CaLG02	N/A	28.8	H5A08	View
10	chickpea-BGD132×CDCFrontier-F2-2017	CaLG02	N/A	3.5	H5A08	View
11	chickpea-ICC16641×CDCFrontier-F2-2017	CaLG02	N/A	30.6	H5A08	View
12	chickpea-flowering_time_consensus_map-F2-2017	CaLG02	N/A	28.7	H5A08	View