LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1

Overview
Library NameLIBEST_026408 Chickpea drought stressed cDNA SSH library AB1
Unique NameLIBEST_026408
OrganismCicer arietinum (chickpea)
Typecdna_library
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1
  • Cultivar: ICC4958 and ICC1882
  • Tissue: Root
  • Developmental stage: Flowering stage
  • Vector: pGEM-T Easy vector
  • Detail: Chickpea drought tolerant cultivar ICC4958 and susceptible cultivar ICCC1882 was used in this study. Plants were grown in pots under near normal optimal condition in glasshouse. Control plants (well watered) were maintained close to 80% field capacity by keeping the pot wet to that level every day by compensating for the loss due to transpiration and water stressed plants were exposed to gradual water stress by partly compensated for the water loss due to transpiration. Plant samples from the control (well watered) and stressed plants were harvested when the transpiration ratio reached to 0.1 in the water stressed plants. Total RNA from root tissue was isolated using Trizol reagent and mRNA was extracted from the total RNA using poly(A) tract mRNA Purification Kit (Promega). Forward SSH library was constructed using subtraction of cDNA synthesized from water stressed ICC4958 plants as tester and that from the water stressed ICC1882 plants as driver with the Clontech PCR-Select cDNA subtraction Kit (CLONTECH, USA) according to the manufacturer‘s protocol. Differentially expressed cDNAs were cloned in pGEMT-Easy vector and transformed into E.Coli. Sanger sequencing of the selected clones were done using universal sequencing primers T7, SP6 and M13.
SNP Chip Base
Array NameLIBEST_026408 Chickpea drought stressed cDNA SSH library AB1
OrganismCicer arietinum (chickpea)
Typecdna_library
Features
The following browser provides a quick view for new visitors. Use the searching mechanism to find specific features.
Feature NameUnique NameType
HO062254HO062254EST
HO062594HO062594EST
HO062407HO062407EST
HO062587HO062587EST
HO062552HO062552EST
HO062451HO062451EST
HO062302HO062302EST
HO062245HO062245EST
HO062550HO062550EST
HO062268HO062268EST
HO062593HO062593EST
HO062444HO062444EST
HO062473HO062473EST
HO062352HO062352EST
HO062371HO062371EST
HO062521HO062521EST
HO062458HO062458EST
HO062394HO062394EST
HO062440HO062440EST
HO062192HO062192EST
HO062340HO062340EST
HO062202HO062202EST
HO062226HO062226EST
HO062415HO062415EST
HO062235HO062235EST

Pages