rna-XM_004494757.3
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Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of rna-XM_004494757.3 vs. Araport11
Match: | (Symbols: ATL21 | Arabidopsis T####xicos en Levadura 21 | chr2:19084134-19085704 REVERSE LENGTH=372) HSP 1 Score: 254.603 bits (649), Expect = 7.797e-82 Identity = 145/355 (40.85%), Postives = 202/355 (56.90%), Query Frame = 0
Query: 23 CRHSWCSNDNILIRFPFQVEVEGDQYPYCGYPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRNIRS-QFIPLECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVAR----SYDEIFRNYLSEDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFSDHQTGDSKHAIVIFRIIILSIGGAAMMCA--IGMGCLTH------FKRRRTISAEPTIDITITRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPSPSHSVL 364
C S C D++ +RFPF + Q CG+ GF L CT KT L LP +G F VR+I+Y Q I+LYDP +CL +LL+ ++S SPF+A ++ +YT L C +S +F + CL NST A S++ S+ SC + + + +PV+R + +DL L W SP C CE C F S S +V+CF +G + V+ +II+LSI G + A I +G T +R I+A ++ +T GLDE+ IES+ K LGESRRLPG +ND C ICLSEY SK+ +RCIP+C HCFH CID WL+++ +CPLCRNSPSP+ +
Sbjct: 26 CSSSSCGRDDVHVRFPFWLL--SKQPELCGHAGFNLQCTASPKTALKLPNSGTFLVREIDYLSQQIRLYDPENCLARKLLTFDISRSPFSALYLVSYTFLSCPNEVAKSSRFDSIPCLGNSTTSFLATTSLDLAKSMLPSCQIVKTLDVPVSRRVIAKKSRFSTDVNDKDLWLKWDSPSCSDCERDFLRCGFRSNTSLQVKCFPFENSGYNTEPQVL-KIILLSIIGPLTIFATCIAVGVCTSERFASLIQRNVAIAALQPNEVIVT---TGLDESIIESYKKTELGESRRLPG--NNDDIVCPICLSEYASKETVRCIPECDHCFHSECIDVWLKIHGSCPLCRNSPSPARQAV 372
BLAST of rna-XM_004494757.3 vs. Araport11
Match: | (Symbols: ATL94 | Arabidopsis T####xicos en Levadura 94 | chr2:19082344-19083811 REVERSE LENGTH=362) HSP 1 Score: 245.358 bits (625), Expect = 2.650e-78 Identity = 133/327 (40.67%), Postives = 191/327 (58.41%), Query Frame = 0
Query: 38 PFQVEVEGDQYPYCGYPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRNIRSQFIP-LECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVARSYDEI-FRNYLSEDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFSDHQTGDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHFKRRRTISAEPTIDITITRM------RMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNS 356
P +V + ++P+C +P F L CTN + TVL LP +G F+V+ I+Y KQ I + DP +CL RLL+ N+S SPF+ +F T YT L C + + P + CLSNST A + S+ SC + ++I +P + E F +YL++ LLL W+SP+CR CE+ C F+++ S V+CF ++G A+V +I LSI GA ++ + H RR A P T+ + GLD++TIE + + LGESRR PG +G C ICLSEY SK+ +R IP+C HCFH CID WL+++ +CPLCRNS
Sbjct: 41 PLEVPI---RFPFCDHPLFNLLCTNLNNTVLQLPMSGTFFVQYIDYRKQQIYINDPENCLAKRLLTFNISGSPFSPRFDTLYTFLTCPNELVLPSWYPSIPCLSNSTSSFFATSNFALAESMLPSCQIVKRIYVPADSPFAETRFSSYLNQSLLLEWNSPNCRGCEIDYLRCGFKNKASPEVKCFGAKKSGHLSRAVVAV-LICLSIIGAVILFVTCIAIRIHNTPRRRHWAVPAAAATVMQQPREVMATRGLDQSTIEKYKTMELGESRRPPGT---NGIVCPICLSEYVSKETVRFIPECDHCFHAKCIDVWLKIHGSCPLCRNS 360
BLAST of rna-XM_004494757.3 vs. Araport11
Match: | (Symbols: ATL22 | Arabidopsis T####xicos en Levadura 22 | chr2:10814470-10815917 FORWARD LENGTH=377) HSP 1 Score: 237.654 bits (605), Expect = 4.131e-75 Identity = 133/350 (38.00%), Postives = 199/350 (56.86%), Query Frame = 0
Query: 28 CSNDNILIRFPFQVEVEGDQYPYCGYPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTR-NIRSQFIPLECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVAR--SYDEIFRNYLSEDLLLTWSSPDCRHCELQ-DGMCKFESRNSDRVRCFSDHQTGDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHFKRR--------------RTISAEPTIDITITRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPSP 359
CS ++++ RFPF + Q CGY GF L C +D+ T L LP + F V++I+Y Q I+L DP +CL RLL+ + S SPF+ NYT LIC NI + F ++CL N+T + N S+P SC++ + + +P + +Y S D+ L W SPDCR CE + + C F++ S +V CFS G + + +I+ LS+ G +G + R +++++P+ ++ R+GLDE+TIES+ K+ LGESRRLP G ND C ICLSEY +K+ +RC+P+C HCFH CID WL+++S+CP+CR++PSP
Sbjct: 34 CSQESVVARFPFSLF--SYQPESCGYSGFNLICKDDANTTLKLPKSEPFLVKEIDYETQRIRLNDPENCLARRLLNFDPSGSPFSFLRSRNYTFLICPKEANITASFRAIDCLGNTTSSFFVVQFENL-GSMPSSCHIFKILPLPFSWFVAYTTYPDGQNSRDMWLKWDSPDCRDCERRTNSRCGFKNNTSHQVECFSSVNPGLHNTGLQVLKIMCLSLVGPLTALTFCVGLVMCSSERVSSQIQQAVVARLSGSVTSQPSNEVA----RIGLDESTIESYKKVELGESRRLP-TGSNDVV-CPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHSSCPVCRSNPSP 374
BLAST of rna-XM_004494757.3 vs. Araport11
Match: | (Symbols: ATL21 | Arabidopsis T####xicos en Levadura 21 | chr2:19084134-19085704 REVERSE LENGTH=344) HSP 1 Score: 236.498 bits (602), Expect = 4.647e-75 Identity = 136/348 (39.08%), Postives = 192/348 (55.17%), Query Frame = 0
Query: 23 CRHSWCSNDNILIRFPFQVEVEGDQYPYCGYPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRNIR-SQFIPLECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVAR----SYDEIFRNYLSEDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFS-DHQTGDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHFKRRRTISAEPTIDITITRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPSPSHSVL 364
C S C D++ +RFPF + Q CG+ GF L CT KT L LP +G F VR+I+Y Q I+LYDP +CL +LL+ ++S SPF+A ++ +YT L C + S+F + CL NST A S++ S+ SC + + + +PV+R + +DL L W SP C CE C F S S +V+CF ++ G + S A+++ +R I+A ++ +T GLDE+ IES+ K LGESRRLP G+ND C ICLSEY SK+ +RCIP+C HCFH CID WL+++ +CPLCRNSPSP+ +
Sbjct: 26 CSSSSCGRDDVHVRFPFWLL--SKQPELCGHAGFNLQCTASPKTALKLPNSGTFLVREIDYLSQQIRLYDPENCLARKLLTFDISRSPFSALYLVSYTFLSCPNEVAKSSRFDSIPCLGNSTTSFLATTSLDLAKSMLPSCQIVKTLDVPVSRRVIAKKSRFSTDVNDKDLWLKWDSPSCSDCERDFLRCGFRSNTSLQVKCFPFENSVG-----------VCTSERFASLI-----------QRNVAIAALQPNEVIVT---TGLDESIIESYKKTELGESRRLP--GNNDDIVCPICLSEYASKETVRCIPECDHCFHSECIDVWLKIHGSCPLCRNSPSPARQAV 344
BLAST of rna-XM_004494757.3 vs. Araport11
Match: | (Symbols: ATL96 | Arabidopsis T####xicos en Levadura 96 | chr5:21529022-21533008 FORWARD LENGTH=382) HSP 1 Score: 231.491 bits (589), Expect = 1.063e-72 Identity = 137/349 (39.26%), Postives = 198/349 (56.73%), Query Frame = 0
Query: 28 CSNDNILIRFPFQVEVEGDQYPYCGY-PGFKLTC--TNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRN-IRSQFI-PLECLSNSTHFVSAIPSMNFTNSLP-QSCYVNRKISIPVARSYDE--IFRNYLSEDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFSDHQTGDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHFK-----RRRTISAEPTID------ITITRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSP 357
C D +IRFPF+++ + Q CGY GF LTC ++T +TLP++G F V +I+Y Q I + DP++CLP R+L LNL+S+PF+ ++ +T C T +R + + P+ CLS V A PS N L QSC + + + +PV + E + + LS++L LTW P C CE++ G C +S +S + C H+ + A I + G + G+ C + K +RR + P I+ + + + MGLD TIES+ KIVLGES+RLP V D C+ICLSEY K+ +R IP+C HCFH CIDEWL++N TCP+CRNSP
Sbjct: 35 CRRDGPIIRFPFRLKHQ--QSHSCGYDKGFDLTCDINAGNRTTITLPFSGNFTVEEIDYAAQEIWINDPNNCLPQRILQLNLNSTPFSGVYMRQFTFFNCPTSEYLRFRPLNPITCLSGKNSTVFATPSPRVINYLSSQSCRLMKTVYVPVRWPFYEQIVSSSDLSDNLWLTWRVPRCSRCEIKGGKCGIKSNSSREIICSHVHKPAIPRRARYA---IAVGAGIPGALIVFGLFCFVYSKISSCIKRRRLVPTPEINNAQAHYLHSSVIVMGLDGPTIESYPKIVLGESKRLPKV---DDATCAICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNGTCPVCRNSP 375
BLAST of rna-XM_004494757.3 vs. Araport11
Match: | (Symbols: ATL20 | Arabidopsis T####xicos en Levadura 20 | chr1:9773580-9774910 REVERSE LENGTH=299) HSP 1 Score: 206.838 bits (525), Expect = 3.832e-64 Identity = 121/306 (39.54%), Postives = 174/306 (56.86%), Query Frame = 0
Query: 73 TGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRNIRS--QFIPLECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVARSYDEIFRNYLSED-----------LLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFSDHQTGDSKHAIVIFRIIILSIGGAAMMC--AIGMGCLTHFKRRRTISAEPTIDITITRMR-----MGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPS 358
+G F V +INY KQ I + DP +C+ RLL+ N S SPF+ F YT L C + + + CLSNST A ++ F+ LP SC + + + +PV D I+++ ++E+ +LL WSSP+CR CE + C F+++ S V+ +D ++K + I + IGG C AI + F +R +A T T + R GLD++TIES+ K+ LGESRRLPG +G C ICLSEY SK+ +RC+P+C HCFHV CIDEWL+++S+CP+CRNS S
Sbjct: 2 SGTFLVDEINYQKQQISISDPENCMVKRLLTFNTSGSPFSYGFSFYYTFLTCPNEVVIPVWSLMSIPCLSNSTSSFFATSNLTFSKLLPPSCQIVKGLYVPV----DVIYKDVITEEKGFSTVPWLGNVLLEWSSPNCRGCEKESLRCGFKNKASLEVKYLAD-PPDETKSRLRPLIITLCIIGGITATCIAAIRIYNSERFVNQRRQNAAITARNTTQQPRGVVVTTGLDQSTIESYKKVELGESRRLPGT---NGIICPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVCRNSRS 299
BLAST of rna-XM_004494757.3 vs. Araport11
Match: | (Symbols: ATL97 | Arabidopsis T####xicos en Levadura 97 | chr5:14142050-14143143 FORWARD LENGTH=322) HSP 1 Score: 168.318 bits (425), Expect = 4.633e-49 Identity = 109/337 (32.34%), Postives = 164/337 (48.66%), Query Frame = 0
Query: 23 CRHSWCSNDNILIRFPFQVEVEGDQYPYCGYPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRNIRSQFI-PLECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVARSYDEIFRNYLSEDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFSDHQTGDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHFKRRRTISAEPTIDITITRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPS 358
C S C +N+ + FPF + E Q C YPGF L C +T L LP + F V+ I Q I L DP +CL RLLS + S SPF+ + NYT L C N++S + P+ CL+NST PS + T S+P SC + + +PV+ + + +DL L W SPDC C +C F + +V+CF+ +G+ ++ +I+ L + + C+ I + ++ V + T C ICLSEY S++ ++C+P+C HCFH CID WL+++++CP+CRNSPS
Sbjct: 30 CYSSSCGGNNLDVSFPFWLSPE--QSSSCDYPGFNLHC----ETALKLPNSRRFLVQDIK--SQRIHLRDPDNCLARRLLSFDASMSPFSPLHLVNYTFLSCHNENVKSSSLEPIHCLTNST------PS-DLTGSMPSSCQTLKTLLLPVS---SPLAGDLNKQDLWLKWDSPDCTGCVDFSPLCSFINNTILKVKCFTYVDSGNP--WLITLKILCLCLSVPFFIVITPAVCI------------------------------------IFIPIQQQAKSVPWRNDTLCPICLSEYTSEETVKCLPECEHCFHTECIDPWLKLHNSCPVCRNSPS 310
BLAST of rna-XM_004494757.3 vs. Araport11
Match: | (Symbols: ATL95 | Arabidopsis T####xicos en Levadura 95 | chr2:19080254-19081242 REVERSE LENGTH=184) HSP 1 Score: 116.316 bits (290), Expect = 8.936e-31 Identity = 70/200 (35.00%), Postives = 106/200 (53.00%), Query Frame = 0
Query: 161 SCYVNRKISIPVARSYDEI-FRNYLS-EDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRCF-SDHQTGDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHFKRRRTISAEPTIDITITRM-RMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNS 356
SC + +++ +P + E F + L+ + LLL W+ PDCR +C + +TG+ +++ I + ++ I + + I+A + M R GLD++TIE+F K+ LGESRRL G +G C ICLSEY SK+ +R IP+C HCFHV CID WL+++ +CPLCRNS
Sbjct: 4 SCQIVKRLHVPATSPFGETRFSSDLNNQSLLLEWALPDCR------------------AKCLGATKKTGNLSSGVLVLVISLSAVTVFVFPTCIAIRLYDSERFDSAIAAATVMQQPREVMARRGLDQSTIETFKKMELGESRRLSG---TNGIVCPICLSEYASKETVRFIPECDHCFHVECIDVWLKIHGSCPLCRNS 182
BLAST of rna-XM_004494757.3 vs. Araport11
Match: | (Symbols: ATL69 | Arabidopsis T####xicos en Levadura 69 | chr5:2190344-2190823 FORWARD LENGTH=159) HSP 1 Score: 112.464 bits (280), Expect = 1.151e-29 Identity = 53/109 (48.62%), Postives = 74/109 (67.89%), Query Frame = 0
Query: 259 FKRRRTISAEPTIDITI------TRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPSPSH 361
+ + T E T D+ + +++GLD IES+ +IVLG+SRRLP N+G CSICL +Y +++ +RCIP+C HCFH C+DEWLR ++TCPLCRNSP+PS
Sbjct: 38 IRSKSTGRDEATSDVVLDLPSPAAEVKLGLDRPVIESYPRIVLGDSRRLPR--PNNGP-CSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCRNSPAPSR 143
BLAST of rna-XM_004494757.3 vs. Araport11
Match: | (Symbols: ATL97 | Arabidopsis T####xicos en Levadura 97 | chr5:14142050-14142715 FORWARD LENGTH=221) HSP 1 Score: 113.235 bits (282), Expect = 3.176e-29 Identity = 75/206 (36.41%), Postives = 107/206 (51.94%), Query Frame = 0
Query: 23 CRHSWCSNDNILIRFPFQVEVEGDQYPYCGYPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRNIRSQFI-PLECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVARSYDEIFRNYLSEDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFSDHQTGD 227
C S C +N+ + FPF + E Q C YPGF L C +T L LP + F V+ I Q I L DP +CL RLLS + S SPF+ + NYT L C N++S + P+ CL+NST PS + T S+P SC + + +PV+ + + +DL L W SPDC C +C F + +V+CF+ +G+
Sbjct: 30 CYSSSCGGNNLDVSFPFWLSPE--QSSSCDYPGFNLHC----ETALKLPNSRRFLVQDI--KSQRIHLRDPDNCLARRLLSFDASMSPFSPLHLVNYTFLSCHNENVKSSSLEPIHCLTNST------PS-DLTGSMPSSCQTLKTLLLPVSS---PLAGDLNKQDLWLKWDSPDCTGCVDFSPLCSFINNTILKVKCFTYVDSGN 217
BLAST of rna-XM_004494757.3 vs. UniProtKB/Swiss-Prot
Match: sp|P0CH01|AT21A_ARATH (Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana OX=3702 GN=ATL21A PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 7.465e-81 Identity = 145/355 (40.85%), Postives = 202/355 (56.90%), Query Frame = 0
Query: 23 CRHSWCSNDNILIRFPFQVEVEGDQYPYCGYPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRNIRS-QFIPLECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVAR----SYDEIFRNYLSEDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFSDHQTGDSKHAIVIFRIIILSIGGAAMMCA--IGMGCLTH------FKRRRTISAEPTIDITITRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPSPSHSVL 364
C S C D++ +RFPF + Q CG+ GF L CT KT L LP +G F VR+I+Y Q I+LYDP +CL +LL+ ++S SPF+A ++ +YT L C +S +F + CL NST A S++ S+ SC + + + +PV+R + +DL L W SP C CE C F S S +V+CF +G + V+ +II+LSI G + A I +G T +R I+A ++ +T GLDE+ IES+ K LGESRRLPG +ND C ICLSEY SK+ +RCIP+C HCFH CID WL+++ +CPLCRNSPSP+ +
Sbjct: 26 CSSSSCGRDDVHVRFPFWLL--SKQPELCGHAGFNLQCTASPKTALKLPNSGTFLVREIDYLSQQIRLYDPENCLARKLLTFDISRSPFSALYLVSYTFLSCPNEVAKSSRFDSIPCLGNSTTSFLATTSLDLAKSMLPSCQIVKTLDVPVSRRVIAKKSRFSTDVNDKDLWLKWDSPSCSDCERDFLRCGFRSNTSLQVKCFPFENSGYNTEPQVL-KIILLSIIGPLTIFATCIAVGVCTSERFASLIQRNVAIAALQPNEVIVT---TGLDESIIESYKKTELGESRRLPG--NNDDIVCPICLSEYASKETVRCIPECDHCFHSECIDVWLKIHGSCPLCRNSPSPARQAV 372
BLAST of rna-XM_004494757.3 vs. UniProtKB/Swiss-Prot
Match: sp|P0CH02|AT21B_ARATH (Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana OX=3702 GN=ATL21B PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.537e-77 Identity = 133/327 (40.67%), Postives = 191/327 (58.41%), Query Frame = 0
Query: 38 PFQVEVEGDQYPYCGYPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRNIRSQFIP-LECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVARSYDEI-FRNYLSEDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFSDHQTGDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHFKRRRTISAEPTIDITITRM------RMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNS 356
P +V + ++P+C +P F L CTN + TVL LP +G F+V+ I+Y KQ I + DP +CL RLL+ N+S SPF+ +F T YT L C + + P + CLSNST A + S+ SC + ++I +P + E F +YL++ LLL W+SP+CR CE+ C F+++ S V+CF ++G A+V +I LSI GA ++ + H RR A P T+ + GLD++TIE + + LGESRR PG +G C ICLSEY SK+ +R IP+C HCFH CID WL+++ +CPLCRNS
Sbjct: 41 PLEVPI---RFPFCDHPLFNLLCTNLNNTVLQLPMSGTFFVQYIDYRKQQIYINDPENCLAKRLLTFNISGSPFSPRFDTLYTFLTCPNELVLPSWYPSIPCLSNSTSSFFATSNFALAESMLPSCQIVKRIYVPADSPFAETRFSSYLNQSLLLEWNSPNCRGCEIDYLRCGFKNKASPEVKCFGAKKSGHLSRAVVAV-LICLSIIGAVILFVTCIAIRIHNTPRRRHWAVPAAAATVMQQPREVMATRGLDQSTIEKYKTMELGESRRPPGT---NGIVCPICLSEYVSKETVRFIPECDHCFHAKCIDVWLKIHGSCPLCRNS 360
BLAST of rna-XM_004494757.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9SKK8|ATL22_ARATH (RING-H2 finger protein ATL22 OS=Arabidopsis thaliana OX=3702 GN=ATL22 PE=2 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 3.959e-74 Identity = 133/350 (38.00%), Postives = 199/350 (56.86%), Query Frame = 0
Query: 28 CSNDNILIRFPFQVEVEGDQYPYCGYPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTR-NIRSQFIPLECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVAR--SYDEIFRNYLSEDLLLTWSSPDCRHCELQ-DGMCKFESRNSDRVRCFSDHQTGDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHFKRR--------------RTISAEPTIDITITRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPSP 359
CS ++++ RFPF + Q CGY GF L C +D+ T L LP + F V++I+Y Q I+L DP +CL RLL+ + S SPF+ NYT LIC NI + F ++CL N+T + N S+P SC++ + + +P + +Y S D+ L W SPDCR CE + + C F++ S +V CFS G + + +I+ LS+ G +G + R +++++P+ ++ R+GLDE+TIES+ K+ LGESRRLP G ND C ICLSEY +K+ +RC+P+C HCFH CID WL+++S+CP+CR++PSP
Sbjct: 34 CSQESVVARFPFSLF--SYQPESCGYSGFNLICKDDANTTLKLPKSEPFLVKEIDYETQRIRLNDPENCLARRLLNFDPSGSPFSFLRSRNYTFLICPKEANITASFRAIDCLGNTTSSFFVVQFENL-GSMPSSCHIFKILPLPFSWFVAYTTYPDGQNSRDMWLKWDSPDCRDCERRTNSRCGFKNNTSHQVECFSSVNPGLHNTGLQVLKIMCLSLVGPLTALTFCVGLVMCSSERVSSQIQQAVVARLSGSVTSQPSNEVA----RIGLDESTIESYKKVELGESRRLP-TGSNDVV-CPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHSSCPVCRSNPSP 374
BLAST of rna-XM_004494757.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9C7E9|ATL20_ARATH (RING-H2 finger protein ATL20 OS=Arabidopsis thaliana OX=3702 GN=ATL20 PE=2 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 3.670e-63 Identity = 121/306 (39.54%), Postives = 174/306 (56.86%), Query Frame = 0
Query: 73 TGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRNIRS--QFIPLECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVARSYDEIFRNYLSED-----------LLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFSDHQTGDSKHAIVIFRIIILSIGGAAMMC--AIGMGCLTHFKRRRTISAEPTIDITITRMR-----MGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPS 358
+G F V +INY KQ I + DP +C+ RLL+ N S SPF+ F YT L C + + + CLSNST A ++ F+ LP SC + + + +PV D I+++ ++E+ +LL WSSP+CR CE + C F+++ S V+ +D ++K + I + IGG C AI + F +R +A T T + R GLD++TIES+ K+ LGESRRLPG +G C ICLSEY SK+ +RC+P+C HCFHV CIDEWL+++S+CP+CRNS S
Sbjct: 2 SGTFLVDEINYQKQQISISDPENCMVKRLLTFNTSGSPFSYGFSFYYTFLTCPNEVVIPVWSLMSIPCLSNSTSSFFATSNLTFSKLLPPSCQIVKGLYVPV----DVIYKDVITEEKGFSTVPWLGNVLLEWSSPNCRGCEKESLRCGFKNKASLEVKYLAD-PPDETKSRLRPLIITLCIIGGITATCIAAIRIYNSERFVNQRRQNAAITARNTTQQPRGVVVTTGLDQSTIESYKKVELGESRRLPGT---NGIICPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVCRNSRS 299
BLAST of rna-XM_004494757.3 vs. UniProtKB/Swiss-Prot
Match: sp|P0CH03|AT21C_ARATH (Putative RING-H2 finger protein ATL21C OS=Arabidopsis thaliana OX=3702 GN=ATL21C PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 6.521e-57 Identity = 123/331 (37.16%), Postives = 180/331 (54.38%), Query Frame = 0
Query: 38 PFQVEVEGDQYPYCGYPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRNIRSQFIP-LECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVARSYDEI-FRNYL-SEDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRC-FS---DHQ----TGDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHFKRRRTISAEPTIDITITRM-RMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNS 356
P +V + ++P+C + F L CT+ +KTVL LP +G F VR I+Y +Q I + DP +CL RLL+ N+S SPF+ F YT L C + + P + CLSNST A + + S+ SC + +++ +P + E F + L ++ LLL W+ PDCR L NS+ C FS D + G+ +++ I + ++ I + + I+A + M R GLD++TIE+F K+ LGESRRL G +G C ICLSEY SK+ +R IP+C HCFHV CID WL+++ +CPLCRNS
Sbjct: 41 PLEVPI---RFPFCNHARFNLHCTDLNKTVLELPMSGTFLVRDIDYRRQKIYINDP-NCLAKRLLTFNISGSPFSPHFDILYTFLSCPNEVVLPSWYPSIPCLSNSTSSFFATSNYSLAQSMLPSCQIVKRLHVPATSPFGETRFSSDLNNQSLLLEWALPDCRAKCLGATKKTGTIYNSNIFSCSFSFLYDSRELFINGNLSSGVLVLVISLSAVTVFVFPTCIAIRLYDSERFDSAIAAATVMQQPREVMARRGLDQSTIETFKKMELGESRRLSGT---NGIVCPICLSEYASKETVRFIPECDHCFHVECIDVWLKIHGSCPLCRNS 364
BLAST of rna-XM_004494757.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FL42|ATL69_ARATH (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.104e-28 Identity = 53/109 (48.62%), Postives = 74/109 (67.89%), Query Frame = 0
Query: 259 FKRRRTISAEPTIDITI------TRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPSPSH 361
+ + T E T D+ + +++GLD IES+ +IVLG+SRRLP N+G CSICL +Y +++ +RCIP+C HCFH C+DEWLR ++TCPLCRNSP+PS
Sbjct: 38 IRSKSTGRDEATSDVVLDLPSPAAEVKLGLDRPVIESYPRIVLGDSRRLPR--PNNGP-CSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCRNSPAPSR 143
BLAST of rna-XM_004494757.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q8RX29|ATL70_ARATH (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.484e-19 Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = 0
Query: 281 GLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPSPS 360
GLDE TI+S+ KI+ E++ G + C+ICL +Y K ++R +P C H FH+ CID WLR+N TCP+CR SP P+
Sbjct: 121 GLDEDTIQSYPKILYSEAK-----GPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCRTSPLPT 195
BLAST of rna-XM_004494757.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M313|ATL68_ARATH (RING-H2 finger protein ATL68 OS=Arabidopsis thaliana OX=3702 GN=ATL68 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.695e-17 Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 0
Query: 281 GLDETTIESFDKIVLGE--SRRLPGVGHNDGTG----CSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPSPS 360
GLD + I S+ K + + + G G +DG G CSICL EY ++++R +P+C H FHV+C+D WL++N +CP+CRNSP P+
Sbjct: 99 GLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPT 184
BLAST of rna-XM_004494757.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FG21|ATL71_ARATH (Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.719e-16 Identity = 38/92 (41.30%), Postives = 55/92 (59.78%), Query Frame = 0
Query: 274 TITRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGTG--CSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPSPSHSV 363
T+ +GL E I+ F K+ E+R + T CSICL++Y D+IR +P C H FH +C+D WLR++ TCP+CR SP PS ++
Sbjct: 89 TVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAM 180
BLAST of rna-XM_004494757.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M0R5|ATL36_ARATH (Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana OX=3702 GN=ATL36 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.509e-15 Identity = 54/148 (36.49%), Postives = 82/148 (55.41%), Query Frame = 0
Query: 207 CKFESRNSDRVRCFSDHQTGDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHFKRRRTISAEPTIDITITRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCR 354
C+ ES ++ +R + + DS AIV+ I I S+G M + + C+ + R I A D+ +R R GL++ IESF + E + L +G G C+ICLSE+ ++ +R +P C+H FH +CID WL STCP+CR
Sbjct: 31 CQQESVPTNSIR--QTNLSADSIIAIVVLAIFI-SLG----MVSCCLHCIFY---REEIGAAGQ-DVLHSRARRGLEKEVIESFPTFLYSEVKGLK-IG-KGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCR 165
BLAST of rna-XM_004494757.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XW25|A0A1S2XW25_CICAR (RING-type E3 ubiquitin transferase OS=Cicer arietinum OX=3827 GN=LOC101507799 PE=3 SV=1) HSP 1 Score: 761.911 bits (1966), Expect = 0.000e+0 Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0
Query: 1 MNISKFFHFFIFFLVIYASEDYCRHSWCSNDNILIRFPFQVEVEGDQYPYCGYPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRNIRSQFIPLECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVARSYDEIFRNYLSEDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFSDHQTGDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHFKRRRTISAEPTIDITITRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPSPSHSVLHSIS 368
MNISKFFHFFIFFLVIYASEDYCRHSWCSNDNILIRFPFQVEVEGDQYPYCGYPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRNIRSQFIPLECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVARSYDEIFRNYLSEDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFSDHQTGDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHFKRRRTISAEPTIDITITRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPSPSHSVLHSIS
Sbjct: 1 MNISKFFHFFIFFLVIYASEDYCRHSWCSNDNILIRFPFQVEVEGDQYPYCGYPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRNIRSQFIPLECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVARSYDEIFRNYLSEDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFSDHQTGDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHFKRRRTISAEPTIDITITRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPSPSHSVLHSIS 368
BLAST of rna-XM_004494757.3 vs. UniProtKB/TrEMBL
Match: tr|G7L440|G7L440_MEDTR (RING-type E3 ubiquitin transferase OS=Medicago truncatula OX=3880 GN=11432850 PE=3 SV=1) HSP 1 Score: 573.548 bits (1477), Expect = 0.000e+0 Identity = 279/368 (75.82%), Postives = 317/368 (86.14%), Query Frame = 0
Query: 1 MNISKFF-HFFIFFLVIYASEDYCRHSWCSNDNILIRFPFQVEVEGDQYPYCGYPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRNIRSQFIPLECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVARSYDEIFRNYLSEDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFSDHQTGDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHFK-RRRTISAEPTIDITITRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGTG-CSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPSPSHSVLH 365
M+I KFF H FI F VIY SEDYC++SWCS +NILIRFPFQ+EV+GD PYCGYPGFKL+CTND KTVLTLPY+G FYVRKINY + +IQ+YDPH CLPNRLLSLNLS SPF + +TNYT+L CST N+ L+CLSNSTHFVSAIPS++FTNSLPQSCY+ R S+PVA SY E F N SEDL LTWSSPDCR+CELQD MC FESRN+++VRCFS+ QTG S+H+++I RIIILSIGG AMMC IG+GC+T FK RRRTISAEP+IDITITRMRMGLDE+TIESF K+VLGESRRLPGVGHNDGTG CSICLSEYNSKDIIRCIP+C HCFH HCIDEWLRMN+TCP+CRNSP PSHS+L
Sbjct: 1 MDILKFFFHLFILFPVIYTSEDYCQNSWCSENNILIRFPFQLEVDGDPRPYCGYPGFKLSCTNDGKTVLTLPYSGVFYVRKINYLEHHIQVYDPHRCLPNRLLSLNLSGSPFVTELLTNYTVLSCSTPNMLGSQFTLDCLSNSTHFVSAIPSLSFTNSLPQSCYIIRNFSVPVASSYPEFFLNNFSEDLELTWSSPDCRYCELQDRMCGFESRNNNQVRCFSNQQTGHSQHSLMISRIIILSIGG-AMMCGIGIGCVTWFKRRRRTISAEPSIDITITRMRMGLDESTIESFGKVVLGESRRLPGVGHNDGTGCCSICLSEYNSKDIIRCIPECKHCFHAHCIDEWLRMNATCPVCRNSPFPSHSLLQ 367
BLAST of rna-XM_004494757.3 vs. UniProtKB/TrEMBL
Match: tr|A0A072U4K2|A0A072U4K2_MEDTR (RING-type E3 ubiquitin transferase OS=Medicago truncatula OX=3880 GN=11432850 PE=3 SV=1) HSP 1 Score: 567 bits (1460), Expect = 0.000e+0 Identity = 279/376 (74.20%), Postives = 317/376 (84.31%), Query Frame = 0
Query: 1 MNISKFF-HFFIFFLVIYASEDYCRHSWCSNDNILIRFPFQVEVEGDQYPYCGYPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRNIRSQFIPLECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVARSYDEIFRNYLSEDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFSDHQT--------GDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHFK-RRRTISAEPTIDITITRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGTG-CSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPSPSHSVLH 365
M+I KFF H FI F VIY SEDYC++SWCS +NILIRFPFQ+EV+GD PYCGYPGFKL+CTND KTVLTLPY+G FYVRKINY + +IQ+YDPH CLPNRLLSLNLS SPF + +TNYT+L CST N+ L+CLSNSTHFVSAIPS++FTNSLPQSCY+ R S+PVA SY E F N SEDL LTWSSPDCR+CELQD MC FESRN+++VRCFS+ QT G S+H+++I RIIILSIGG AMMC IG+GC+T FK RRRTISAEP+IDITITRMRMGLDE+TIESF K+VLGESRRLPGVGHNDGTG CSICLSEYNSKDIIRCIP+C HCFH HCIDEWLRMN+TCP+CRNSP PSHS+L
Sbjct: 1 MDILKFFFHLFILFPVIYTSEDYCQNSWCSENNILIRFPFQLEVDGDPRPYCGYPGFKLSCTNDGKTVLTLPYSGVFYVRKINYLEHHIQVYDPHRCLPNRLLSLNLSGSPFVTELLTNYTVLSCSTPNMLGSQFTLDCLSNSTHFVSAIPSLSFTNSLPQSCYIIRNFSVPVASSYPEFFLNNFSEDLELTWSSPDCRYCELQDRMCGFESRNNNQVRCFSNQQTEVRTFVSSGHSQHSLMISRIIILSIGG-AMMCGIGIGCVTWFKRRRRTISAEPSIDITITRMRMGLDESTIESFGKVVLGESRRLPGVGHNDGTGCCSICLSEYNSKDIIRCIPECKHCFHAHCIDEWLRMNATCPVCRNSPFPSHSLLQ 375
BLAST of rna-XM_004494757.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D5ATI7|A0A9D5ATI7_PEA (RING-type E3 ubiquitin transferase OS=Pisum sativum OX=3888 GN=KIW84_030148 PE=3 SV=1) HSP 1 Score: 491.5 bits (1264), Expect = 2.329e-171 Identity = 254/367 (69.21%), Postives = 298/367 (81.20%), Query Frame = 0
Query: 1 MNISKF-FHFFIFFLVIYASEDYCRHSWCSNDNILIRFPFQVEVEGDQ-YPYCGYPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRNIRSQFIPLECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVARSYDEIF-RNYLSEDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFS----DHQTGDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHFKRRRTISAEPTIDITITRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGT-GCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPSP 359
M+I F FH F+FF VIY ++ C+ SWCS +NILIRFPF++EVEGDQ PYCGYPGF+L+CTNDS+T+LTLPY+G FYVR I+Y +QYIQ+YDPH CL NRLLSLNLS SPF F+TN+TLL CS+ NI SQFIP++CLSNSTHFVS PS++FTNSLPQSCYV +S+PV SY + F N +SED LTWS P+CR+CELQDG+C F+SRNSD+VRCFS +HQTG S ++I RIIIL +GG A++ AIG GCL + RRRTIS EP ITITRM +GLDE+TIESF KIVLGESRRLPGV HNDGT C ICLSEYNSKDIIRCIP+C HCFH HCIDEWLRMN+TCP+CRNS SP
Sbjct: 1 MDILNFLFHLFMFFPVIYTLQNSCQSSWCSENNILIRFPFRLEVEGDQGNPYCGYPGFELSCTNDSRTILTLPYSGVFYVRDIDYLRQYIQVYDPHRCLLNRLLSLNLSGSPFVTGFLTNFTLLSCSSPNIGSQFIPVDCLSNSTHFVSVFPSLSFTNSLPQSCYVIGNLSVPVDSSYQDFFLNNQVSEDFELTWSKPNCRYCELQDGLCGFKSRNSDQVRCFSNHQTNHQTGHSDDDLLISRIIILCVGGTALLFAIGTGCLARYSRRRTISDEPA--ITITRMGVGLDESTIESFGKIVLGESRRLPGVEHNDGTCCCPICLSEYNSKDIIRCIPECRHCFHAHCIDEWLRMNTTCPICRNSASP 365
BLAST of rna-XM_004494757.3 vs. UniProtKB/TrEMBL
Match: tr|V7BMX4|V7BMX4_PHAVU (RING-type E3 ubiquitin transferase OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G112600g PE=3 SV=1) HSP 1 Score: 456.447 bits (1173), Expect = 2.069e-157 Identity = 235/378 (62.17%), Postives = 282/378 (74.60%), Query Frame = 0
Query: 1 MNISKFFHFFIFFLVIYASEDYCRHSWCSNDNILIRFPFQVEVEGDQYPYCGYPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPF-TAKFITNYTLLICSTRNIRSQFIPLECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVARSYDEIFRN-YLSEDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFSDHQTGDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHFKRRRTISAE--------PT-IDITITRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPS-PSHSVLHS 366
M + FHFFI F V YAS D +SWCS++NILIRFPFQ++ G Q+PYCGYPGFKLTC+NDSKTV+TLPYTG F+VR INY +Q +Q+YDP DCLP RLLSLNLS SPF A + NYTLL C TR+ SQFIP++CLSNST FVSAIPS+NFTNSL QSC+V +K+S PV E FR+ LS DLLL W +PDCR+CE Q+ MC FES NSD+VRCFSD+QT +H + +F II LS G A++CAIGM C F RR+ +A PT + +RMGLDE+TIES+ K+ LGESRR+P G N+G C+ICLSEY +KD IRCIP+C+HCFH CIDEWLRMNSTCPLCRNSPS PS +VL +
Sbjct: 2 MFLKLLFHFFILFAVAYASSDCQYYSWCSDNNILIRFPFQIQ--GQQHPYCGYPGFKLTCSNDSKTVITLPYTGKFFVRNINYLRQQMQVYDPDDCLPKRLLSLNLSGSPFIVASSLRNYTLLSCPTRHTGSQFIPIDCLSNSTSFVSAIPSVNFTNSLLQSCHVLKKLSFPVLGPNQETFRDELLSGDLLLAWHAPDCRYCESQEAMCGFESINSDQVRCFSDYQTERPQHGLRVFGIITLSTVGPAIICAIGMACYASFMYRRSSTARIGAAQSSTPTGMSPQPAIVRMGLDESTIESYQKLELGESRRVP--GPNEGC-CTICLSEYKAKDTIRCIPECSHCFHADCIDEWLRMNSTCPLCRNSPSHPSSTVLST 374
BLAST of rna-XM_004494757.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3PDQ5|A0A2K3PDQ5_TRIPR (RING-type E3 ubiquitin transferase (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g010027 PE=3 SV=1) HSP 1 Score: 448.743 bits (1153), Expect = 1.445e-153 Identity = 224/316 (70.89%), Postives = 248/316 (78.48%), Query Frame = 0
Query: 44 EGDQYPYCGYPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRNIRSQFIPLECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVARSYDEIFRNYLSEDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFSDHQTGDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHF-KRRRTISAEPTIDITITRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGTGC-SICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSP 357
EGD+YPYCGYPGF LTCTNDSKTVLTLPY+G FYVR+I+Y +IQ+YDPH CLPNRLLSLNLS SPF +F+TNYTLL CST N+ SQF P++CLSNSTHFVSA PS++F NSLPQSC+V R IS+PV SY EIF SEDL LTWSSPDCR+CEL D MC FESRNS+ VRC +HQTG CLTHF +RRRTIS EP IDITITRMRMGLDE+TIESF+KIVLGESRRLPGVGH DGTGC SICLSEYN KDIIRCIP+C HCFH HCID WLRMN+TCP+CRNSP
Sbjct: 134 EGDRYPYCGYPGFSLTCTNDSKTVLTLPYSGVFYVRRIDYLGHHIQVYDPHHCLPNRLLSLNLSGSPFDTEFLTNYTLLSCSTPNLGSQFTPVDCLSNSTHFVSATPSLSFPNSLPQSCHVIRNISVPVTTSYQEIF----SEDLQLTWSSPDCRYCELLDSMCGFESRNSNHVRCSPNHQTG----------------------------CLTHFNRRRRTISDEPAIDITITRMRMGLDESTIESFEKIVLGESRRLPGVGHTDGTGCCSICLSEYNGKDIIRCIPECKHCFHAHCIDAWLRMNATCPICRNSP 417
BLAST of rna-XM_004494757.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445FLL7|A0A445FLL7_GLYSO (RING-type E3 ubiquitin transferase OS=Glycine soja OX=3848 GN=D0Y65_052579 PE=3 SV=1) HSP 1 Score: 439.499 bits (1129), Expect = 1.141e-150 Identity = 227/371 (61.19%), Postives = 274/371 (73.85%), Query Frame = 0
Query: 1 MNISK-FFHFFIFFLVIYASEDYCRHSWCSNDNILIRFPFQVEVEGDQYPYCG-YPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRNIRSQFIPLECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVAR--SYDEIFRNYLSEDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFSDHQTGDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHFKRRRTISA--------EPT-IDITITRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPS 358
M+I K FHFFIFF V YAS+D +SWCS++NILIRFPFQ+E G Q+PYCG YPGFKLTCTNDSKTV+ LPYTG F VR INY +Q IQ+YDP +CLP RLLSLNLS SPF A + NYT L C TRN SQFIP++CLSNST FVSAI S+N N LP+SC+V +K++ PV+R Y+EIFR+ LS DL LTW +PDCR+CE Q+ +C FES NSD+VRCF D+QT +H + +F II SI G A++ I + C K RR +A EP+ I + MGLD++TIES+ K+VLGESRR+P G NDG C+ICLSEY +KD IRCIP+C HCFH CIDEWLRMNSTCP+CRNSPS
Sbjct: 1 MDILKVLFHFFIFFHVTYASDDCKYYSWCSDNNILIRFPFQIE--GHQHPYCGGYPGFKLTCTNDSKTVIKLPYTGKFIVRNINYLRQQIQVYDPDNCLPKRLLSLNLSGSPFVAASLRNYTFLRCPTRNAGSQFIPIDCLSNSTSFVSAILSVNLPNPLPESCHVIKKLTFPVSRPGPYEEIFRDDLSGDLRLTWHAPDCRYCESQEALCGFESINSDQVRCFFDYQTAPPQHGLRVFGIITSSIVGPAIIFVIAIACYASLKYRRGNTARIAAAQRSEPSAISPQPSIATMGLDDSTIESYQKLVLGESRRVP--GPNDGC-CTICLSEYKTKDTIRCIPECAHCFHAECIDEWLRMNSTCPVCRNSPS 366
BLAST of rna-XM_004494757.3 vs. UniProtKB/TrEMBL
Match: tr|I1NCL4|I1NCL4_SOYBN (RING-type E3 ubiquitin transferase OS=Glycine max OX=3847 GN=100799895 PE=3 SV=1) HSP 1 Score: 439.499 bits (1129), Expect = 1.141e-150 Identity = 227/371 (61.19%), Postives = 274/371 (73.85%), Query Frame = 0
Query: 1 MNISK-FFHFFIFFLVIYASEDYCRHSWCSNDNILIRFPFQVEVEGDQYPYCG-YPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRNIRSQFIPLECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVAR--SYDEIFRNYLSEDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFSDHQTGDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHFKRRRTISA--------EPT-IDITITRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPS 358
M+I K FHFFIFF V YAS+D +SWCS++NILIRFPFQ+E G Q+PYCG YPGFKLTCTNDSKTV+ LPYTG F VR INY +Q IQ+YDP +CLP RLLSLNLS SPF A + NYT L C TRN SQFIP++CLSNST FVSAI S+N N LP+SC+V +K++ PV+R Y+EIFR+ LS DL LTW +PDCR+CE Q+ +C FES NSD+VRCF D+QT +H + +F II SI G A++ I + C K RR +A EP+ I + MGLD++TIES+ K+VLGESRR+P G NDG C+ICLSEY +KD IRCIP+C HCFH CIDEWLRMNSTCP+CRNSPS
Sbjct: 1 MDILKVLFHFFIFFHVTYASDDCKYYSWCSDNNILIRFPFQIE--GHQHPYCGGYPGFKLTCTNDSKTVIKLPYTGKFIVRNINYLRQQIQVYDPDNCLPKRLLSLNLSGSPFVAASLRNYTFLRCPTRNAGSQFIPIDCLSNSTSFVSAILSVNLPNPLPESCHVIKKLTFPVSRPGPYEEIFRDDLSGDLRLTWHAPDCRYCESQEALCGFESINSDQVRCFFDYQTAPPQHGLRVFGIITSSIVGPAIIFVIAIACYASLKYRRGNTARIAAAQRSEPSAISPQPSIATMGLDDSTIESYQKLVLGESRRVP--GPNDGC-CTICLSEYKTKDTIRCIPECAHCFHAECIDEWLRMNSTCPVCRNSPS 366
BLAST of rna-XM_004494757.3 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6KLQ3|A0A4D6KLQ3_VIGUN (RING-type E3 ubiquitin transferase OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g1160 PE=3 SV=1) HSP 1 Score: 433.721 bits (1114), Expect = 2.035e-148 Identity = 228/368 (61.96%), Postives = 273/368 (74.18%), Query Frame = 0
Query: 1 MNISKF-FHFFIFFLVIYASEDYCRHSWCSNDNILIRFPFQVEVEGDQYPYCGYPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRNIRSQFIPLECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVARSYDEIF-RNYLSEDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFSDHQTGDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHFKRRRTISAE--------PTIDITITRMRMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRNSPS 358
MN K FH FI F V YAS D +SWCS++NILIRFPFQ++ G Q+PYCGYPGF+LTC+NDSKTV+TLPY G F+VR INY +Q +Q+YDP DCLP RLLSLNLS+SPF + NYTL C T + SQFIP++CLSNST FVSAIPS+NFT SLP SC+V +K+S PVA Y + F + LS DLLLTWSSPDCR+CE Q +C FES NSD+V CF D+QTG ++H + +F II LSI G A+MCAI M C FK RR +A PT +RMGLDE+TIES+ K+ LGESRR+P G N+G C+ICLSEY +KD IRCIP+C HCFH HCIDEWLR+N+TCPLCRNSPS
Sbjct: 1 MNFLKLLFHCFIPFAVAYASSDCQYYSWCSDNNILIRFPFQIQ--GLQHPYCGYPGFQLTCSNDSKTVITLPYMGKFFVRNINYLRQEMQVYDPDDCLPKRLLSLNLSASPFIVTSLRNYTLFSCPTPHTGSQFIPIDCLSNSTSFVSAIPSLNFTTSLPDSCHVLKKLSFPVA--YQQNFSDDLLSGDLLLTWSSPDCRYCESQQALCGFESINSDQVSCFFDYQTGGAEHGLRVFGIITLSIVGPAIMCAIAMACYASFKYRRGNTARISAAQRSAPTEIAEAGTVRMGLDESTIESYQKLELGESRRVP--GPNEGC-CTICLSEYKTKDTIRCIPECAHCFHAHCIDEWLRINTTCPLCRNSPS 361
BLAST of rna-XM_004494757.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8L413|A0A8B8L413_ABRPR (RING-type E3 ubiquitin transferase OS=Abrus precatorius OX=3816 GN=LOC113862082 PE=3 SV=1) HSP 1 Score: 433.721 bits (1114), Expect = 2.601e-148 Identity = 222/349 (63.61%), Postives = 264/349 (75.64%), Query Frame = 0
Query: 17 YASEDYCRHSWCSNDNILIRFPFQVEVEGDQYPYCGYPGFKLTCTNDSKTVLTLPYTGAFYVRKINYHKQYIQLYDPHDCLPNRLLSLNLSSSPFTAKFITNYTLLICSTRN--IRSQFIPLECLSNSTHFVSAIPSMNFTNSLPQSCYVNRKISIPVA--RSYDEIFRNYLSEDLLLTWSSPDCRHCELQDGMCKFESRNSDRVRCFSDHQTGDSKHAIVIFRIIILSIGGAAMMCAIGMGCLTHFKRRRTIS-----AEPTIDITITRM-RMGLDETTIESFDKIVLGESRRLPGVGHNDGTGCSICLSEYNSKDIIRCIPKCTHCFHVHCIDEWLRMNSTCPLCRN 355
YAS D C+ SWCS+++ILIRFPFQ+ G+Q PYCGYPGFKLTCTNDSKTVLTLPY G FYVR I+Y +Q IQ+YDPH+CLP RLLSLNLS SPF A F NYT L C T+N SQFIP++CLSNST FVSAIPS+N TNSL SC V +K+S+ +A R Y E F++ L+EDL LTW +PDCR+CE Q+ MC FES NS +V+CF D+QTG S+H + +F II LSI G A++CAIGM C K R IS A+ + I + RMGLDE TIES+ K+VLGESRRLPG+ NDG C+ICLSEY +KD IRCIP+C HCFH CIDEWLRMN+TCPLCRN
Sbjct: 19 YASND-CKFSWCSDNDILIRFPFQL---GEQRPYCGYPGFKLTCTNDSKTVLTLPYAGEFYVRNIDYFRQQIQVYDPHNCLPKRLLSLNLSGSPFIAAFDHNYTFLSCPTQNTVTGSQFIPIDCLSNSTSFVSAIPSVNLTNSLRGSCSVIKKLSVAIARPRQYVENFKDDLTEDLQLTWYAPDCRYCEAQEAMCGFESINSSQVQCFFDYQTGRSQHGLRVFGIITLSIAGPAIICAIGMTCFACLKYNRGISPRIAAAQRSAATEIPAITRMGLDEFTIESYQKLVLGESRRLPGL--NDGC-CTICLSEYKTKDTIRCIPECAHCFHADCIDEWLRMNTTCPLCRN 360 The following BLAST results are available for this feature:
BLAST of rna-XM_004494757.3 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs arabidopsis Araport11) Total hits: 10
BLAST of rna-XM_004494757.3 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt Swissprot) Total hits: 10
BLAST of rna-XM_004494757.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-01-25 (Blastp of Cicer arietinum cv. CDC Frontier NCBI proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum CDC Frontier NCBI RefSeq v1
Date Performed: 2024-01-25
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-XM_004494757.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004494757.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004494757.3; organism=Cicer arietinum; type=mRNA; length=1107bpback to top protein sequence of rna-XM_004494757.3_CaCDCfrontier-NCBI_v1 >rna-XM_004494757.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004494757.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004494757.3_CaCDCfrontier-NCBI_v1; organism=Cicer arietinum; type=polypeptide; length=368bpback to top mRNA from alignment at chr3:39442571..39445495- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-XM_004494757.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004494757.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004494757.3; organism=Cicer arietinum; type=mRNA; length=2925bp; location=Sequence derived from: chr3:39442571..39445495- (Cicer arietinumback to top Coding sequence (CDS) from alignment at chr3:39442571..39445495- >rna-XM_004494757.3_CaCDCfrontier-NCBI_v1 ID=rna-XM_004494757.3_CaCDCfrontier-NCBI_v1; Name=rna-XM_004494757.3; organism=Cicer arietinum; type=CDS; length=1107bp; location=Sequence derived from: chr3:39442571..39445495- (Cicer arietinumback to top |