Vigun11g127100.3

Transcript Overview
NameVigun11g127100.3
Unique NameVigun11g127100.3_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length2008
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu11supercontigVu11:33417345..33419816 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuR094Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
crvuL016Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuL408Pisum sativum Cameor genome v1aPisum sativum
pvvuL016Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvuL679Pisum sativum Cameor genome v1aPisum sativum
psvuL686Pisum sativum Cameor genome v1aPisum sativum
pvvuL156Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvuL625Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL481Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL012Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0015Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL485Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0993Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL1107Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0263Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0553Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0931Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1041Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1084Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL094Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL582Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR133Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR144Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL126Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL119Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL685Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL642Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vssvuL024Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvuL201Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL285Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL182Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR075Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR081Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL010Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL451Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL046Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL505Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL016Cicer arietinum
carvuL448Cicer arietinum
ccavuL090Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL371Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR130Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR136Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR156Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR133Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR134Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR158Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL454Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL502Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL473Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL518Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL011Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL141Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL412Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR078Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR086Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun11g127100Vigun11g127100_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun11g127100.3Vigun11g127100.3_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun11g127100.3_Vu_IT97K-499-35_v1.1Vigun11g127100.3_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun11g127100.3.v1.1.five_prime_UTR.1Vigun11g127100.3.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR
Vigun11g127100.3.v1.1.five_prime_UTR.2Vigun11g127100.3.v1.1.five_prime_UTR.2_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR
Vigun11g127100.3.v1.1.five_prime_UTR.3Vigun11g127100.3.v1.1.five_prime_UTR.3_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun11g127100.3.v1.1.CDS.1Vigun11g127100.3.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun11g127100.3.v1.1.CDS.2Vigun11g127100.3.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun11g127100.3.v1.1.three_prime_UTR.1Vigun11g127100.3.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
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BLAST of Vigun11g127100.3 vs. DB:Swiss
Match: FBL34_ARATH (F-box/LRR-repeat protein At1g67190 OS=Arabidopsis thaliana OX=3702 GN=At1g67190 PE=2 SV=1)

HSP 1 Score: 622.468 bits (1604), Expect = 0.000e+0
Identity = 309/417 (74.10%), Postives = 361/417 (86.57%), Query Frame = 1 
Query:    1 MDQLPVEVIGNILSHLRAARDVVIASATCRKWRQACCKHLHTLSFSSKDWPIYRDLTTTRLEILITQTIFQTSGLQALSILMEDVDEFSASTVTAWLLYTRETLRQLHYNVKTMPNVNILEICGRHKLEILDLAHNSIVGVEPNYQRFPCLKSLSLSYVSISALDLNLLVYACPKIEVLELVNPEIAMSDAQVTIELSSSTLKRVYVEAISLDKFILEADGLETLHLKDCALEFFELIGKGALKHFKIDDVSVIHLDIGETVEDLETVDISNFTIIWPKFYQMISRSSNLKRLRLWXXXXXXXXXXXXXXTIATCFPYLSHLSLSYDVRYGVLHYGLQGSSDLENVVVLELGWTVINDLFSHWVEGLLKRCPNLKKLVIHGVVSEAKSHEECQMLASFTTAMVEMMRRYIHVDPHFK 1251
            MD LPVEVIGNILS L  ARDVVIASATCRKWR+AC KHL TLSF+S DWP YRDLTT RLEILITQTIFQT GLQ LSI+M+D ++FSA+TV AWL+YTR+TLR+L YNV+T PNVNILEICGR KLE L LAHNSI GVEP++QRFPCLKSLSLSYVSISALDLNLL+ ACP IE LELV+ EIAMSDAQVTIELSS TLK VY + ISLDKFILEAD +E LH+KDC LE FELIG G LKHFK+DDVSVIHLDI ET E LE VD+++FT++WPKFYQMISRS  LK+LRLWDV+FDD+DE++D+E+IA  F +L+HLSLSYD++ G  HY LQG++ LENV VLELGWTVIND+FS WVE LL+RCPNLKKL+I+GVVSE K+  +CQ+LA+FT ++V++MR+YIHV+  F+
Sbjct:    1 MDYLPVEVIGNILSRLGGARDVVIASATCRKWREACRKHLQTLSFNSADWPFYRDLTTNRLEILITQTIFQTMGLQGLSIMMDDANKFSAATVIAWLMYTRDTLRRLSYNVRTTPNVNILEICGRQKLEALVLAHNSITGVEPSFQRFPCLKSLSLSYVSISALDLNLLLSACPMIESLELVSLEIAMSDAQVTIELSSPTLKSVYFDGISLDKFILEADSIEFLHMKDCVLELFELIGNGTLKHFKLDDVSVIHLDIMETSESLEVVDVNHFTMVWPKFYQMISRSQKLKKLRLWDVVFDDDDEIIDVESIAAGFSHLTHLSLSYDLKDGAAHYSLQGTTQLENVTVLELGWTVINDVFSIWVEELLRRCPNLKKLIIYGVVSETKTQGDCQILATFTWSIVQLMRKYIHVEVQFE 417
[Close]
BLAST of Vigun11g127100.3 vs. DB:Swiss
Match: FB2_ARATH (F-box protein At1g10780 OS=Arabidopsis thaliana OX=3702 GN=At1g10780 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 5.616e-7
Identity = 70/314 (22.29%), Postives = 138/314 (43.95%), Query Frame = 1 
Query:    1 MDQLPVEVIGNILSHLRAARDVVIASATCRKWRQAC----CKHLHTLSFSSKDWPIYRDLTTTRLEILITQTIFQTSGLQALSILMEDVDEFSASTVTAWLLYTRETLRQLHYNVKTMPNVNILEICGRHKLEILDLAHN----SIVGV----EPNYQRFPCLKSLSLSYVSISALDLNLLVYACPKIEVLELVNPEIAMSDAQVTIELSSSTLKRVYVEAISLDKF-------ILEADGLETLHLKDCALEFFELIGKGALKHFKIDDVS--VIHLDIGETVEDLETVDISNFTIIWPKFYQMISRSSNLKRL 879
            MD LP  ++  ILS+L +ARDV   +   ++W+++         H  SF S        + T   + ++ + I  +  L+ L +       F++S + +W+++   +LR L   +  + +  ++ + G  KL+ + +A N     + GV     P +  FP L+SL +    +    L+  + ACP +  L L+  E   S   ++I+L        Y+E   LD +       +L +  L +L ++ C+  +  +     LK+  I  V+  V  +D    +  LE + I      W     ++ ++ ++K L
Sbjct:    1 MDSLPDAILQYILSYLTSARDVAACNCVSKRWKESTDSVKSVVFHRNSFESI-------METDDSDSIVRKMISSSRRLEELVV----YSPFTSSGLASWMMHVSSSLRLLELRMDNLASEEVV-VEGPLKLDCIGVAKNLEILKLWGVLMMSPPKWDMFPNLRSLEIVGAKMDDSSLSHALRACPNLSNLLLLACEGVKS---ISIDLP-------YLEHCKLDFYGQGNTLLVLTSQRLVSLDVQGCS--WIRVPETKFLKNLSISSVTGRVYMVDFN-NLSSLEALSIRGVQWCWDAICMILQQARDVKHL 289
The following BLAST results are available for this feature:
BLAST of Vigun11g127100.3 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
FBL34_ARATH0.000e+074.10F-box/LRR-repeat protein At1g67190 OS=Arabidopsis ... [more]
FB2_ARATH5.616e-722.29F-box protein At1g10780 OS=Arabidopsis thaliana OX... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 4..45
e-value: 2.2E-4
score: 30.5
IPR001810F-box domainPFAMPF12937F-box-likecoord: 2..39
e-value: 2.2E-7
score: 30.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 243..400
e-value: 4.8E-9
score: 37.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 98..233
e-value: 9.9E-8
score: 33.3
NoneNo IPR availableGENE3D1.20.1280.50coord: 1..43
e-value: 7.5E-7
score: 31.0
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 73..381
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 2..54

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun11g127100.3_Vu_IT97K-499-35_v1.1 ID=Vigun11g127100.3_Vu_IT97K-499-35_v1.1; Name=Vigun11g127100.3; organism=Vigna unguiculata; type=mRNA; length=2008bp
CAATAGAGATTAACACAAATTTTCAGACCAGAACAATTGTAGTATGTGTA
ACTGAAACGCGTAGGAATAAAATCTTGGGAAATCCTAAATCAAACTCAAA
CGAACCAACTTTGGTTTGGTTTGTTTGGTTTCAGACTATGAGATTTCACG
ACTCGTTCTCTGGTCCGATCGCTCTCTTTTTCTCTAACCCAATAGCAATC
AACAATAATCCTATTTCGTAATTCATTATTTTACAGCGAGAAGAGAAATC
GACGAGAGATGTTGAGCATTTTGCATCTGATGAAATGCATTGGAGTGATT
TCTGAGATATAGCGTTGTGAGGGGTTTCCAAGCTGGGAATTGCAGCATCA
TGGACCAGCTTCCTGTTGAAGTGATTGGGAACATTCTGTCTCACTTGAGG
GCTGCACGAGATGTGGTGATAGCCTCTGCAACATGCAGGAAATGGCGACA
AGCGTGCTGCAAACACCTTCATACCCTTTCATTCAGCTCCAAAGATTGGC
CCATTTATCGAGATTTGACGACTACCCGTCTCGAGATTTTGATCACACAA
ACCATTTTTCAGACCTCAGGGTTGCAGGCTCTCTCCATTCTGATGGAAGA
TGTGGATGAATTCTCGGCTTCAACGGTTACTGCTTGGCTCTTGTACACCA
GGGAAACTTTGAGGCAATTGCATTATAATGTCAAGACTATGCCTAATGTT
AACATTCTTGAAATATGTGGCAGGCACAAGCTGGAAATTTTAGATCTTGC
TCATAATTCTATTGTGGGGGTTGAGCCTAATTATCAGCGATTCCCTTGCT
TGAAGTCTCTTTCTCTGAGTTATGTCAGTATATCTGCATTGGATCTGAAT
CTTCTGGTATATGCATGTCCGAAGATTGAAGTTTTGGAGCTTGTGAATCC
TGAGATTGCAATGTCTGATGCACAGGTGACTATTGAATTGAGTAGCTCAA
CGCTGAAGAGGGTGTATGTAGAAGCTATCAGTTTGGACAAGTTTATATTG
GAGGCTGATGGGCTTGAGACCTTGCACTTGAAAGATTGTGCACTTGAGTT
CTTTGAACTCATTGGCAAGGGGGCCTTGAAGCATTTCAAGATTGATGATG
TTAGTGTTATACATCTTGATATTGGCGAGACAGTTGAGGATCTTGAGACT
GTGGATATCAGCAACTTCACAATTATATGGCCAAAGTTTTACCAGATGAT
TTCAAGATCATCAAATCTAAAGAGGCTTCGCCTCTGGGACGTGATGTTCG
ACGACGAGGATGAGGTTGTGGATATGGAAACAATTGCAACTTGCTTTCCT
TACCTCAGCCATTTATCTCTGAGTTATGATGTGAGATATGGAGTTCTTCA
CTATGGCTTACAAGGCTCTTCCGATCTAGAGAATGTTGTTGTGTTGGAGC
TTGGTTGGACTGTGATCAATGATCTTTTCTCCCATTGGGTTGAGGGGCTG
CTTAAACGCTGTCCCAATCTCAAGAAATTGGTGATTCATGGAGTTGTTTC
TGAGGCAAAGTCTCATGAAGAATGCCAGATGTTAGCCAGTTTCACCACAG
CAATGGTTGAGATGATGAGGAGATACATACATGTAGATCCACATTTTAAG
TAACTCATTCAATTCAAAAAGTTTATCCTCAACTTTTAACTTGTTGTTTG
GAATCTTCTGAAATCTGGGTGACTCACCAACAAAGATAGCTTCACGATAC
ACATTCATAACTTCGACCACTTCTTAGTAGACAAAAATGGCCACGAACTA
ATCTGCAAATTTTACACTTTCATTTCTGTTCTGGGAATTCTGATCTTATA
ATTAAGACTGTAAAAGTAAATCATGAAGGCATTGTAACAGATTCAAGTTT
TTAGGTAAGAGTGTTGTTATTGTAGCTGGCCTTCAATATCGTTGAAAGTA
TTTTTCTTAAGAGTTTCATATTCTTTTGTTTCTCTTGTATTTAGATCTAT
TTTCTTAGCAGTTTCATACCTCAACTGACTTTTCAGTAGTCTGATTTATT
CACATATG
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protein sequence of Vigun11g127100.3_Vu_IT97K-499-35_v1.1

>Vigun11g127100.3_Vu_IT97K-499-35_v1.1 ID=Vigun11g127100.3_Vu_IT97K-499-35_v1.1; Name=Vigun11g127100.3_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=418bp
MDQLPVEVIGNILSHLRAARDVVIASATCRKWRQACCKHLHTLSFSSKDW
PIYRDLTTTRLEILITQTIFQTSGLQALSILMEDVDEFSASTVTAWLLYT
RETLRQLHYNVKTMPNVNILEICGRHKLEILDLAHNSIVGVEPNYQRFPC
LKSLSLSYVSISALDLNLLVYACPKIEVLELVNPEIAMSDAQVTIELSSS
TLKRVYVEAISLDKFILEADGLETLHLKDCALEFFELIGKGALKHFKIDD
VSVIHLDIGETVEDLETVDISNFTIIWPKFYQMISRSSNLKRLRLWDVMF
DDEDEVVDMETIATCFPYLSHLSLSYDVRYGVLHYGLQGSSDLENVVVLE
LGWTVINDLFSHWVEGLLKRCPNLKKLVIHGVVSEAKSHEECQMLASFTT
AMVEMMRRYIHVDPHFK*
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mRNA from alignment at Vu11:33417345..33419816+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun11g127100.3_Vu_IT97K-499-35_v1.1 ID=Vigun11g127100.3_Vu_IT97K-499-35_v1.1; Name=Vigun11g127100.3; organism=Vigna unguiculata; type=mRNA; length=2472bp; location=Sequence derived from: Vu11:33417345..33419816+ (Vigna unguiculata
CAATAGAGATTAACACAAATTTTCAGACCAGAACAATTGTAGTATGTGTA
ACTGAAACGCGTAGGAATAAAATCTTGGGAAATCCTAAATCAAACTCAAA
CGAACCAACTTTGGTTTGGTTTGTTTGGTTTCAGACTATGAGATTTCACG
ACTCGTTCTCTGGTCCGATCGCTCTCTTTTTCTCTAACCCAATAGCAATC
AACAATAATCCTATTTCGTAATTCATTATTTTACAGGTGAACAACCATTT
TCTCTATCCTATACCCACTTTTTTCTGTTCTTTTACAATCAATTATTGTG
ATTACTACTGTTGTTGTTATTGTTGTTGTTGACGATTATGGTTTATTTAA
TTTAAATTCTGATCCTTAATTCTATTCCCCGAATCCCATTTGACCTGCTT
GATTAAATCTTAAATCTTGATTACTTCCCCTGATTTCGTGATTTCTGTGC
AAACTGATCCAGCGAGAAGAGAAATCGACGAGAGATGTTGAGCATTTTGC
ATCTGATGAAATGCATTGGAGTGATTTCTGAGGTTTCTTCCGAAATTGCT
GTTGAATTGAATTGAATTGAATTGAAGGATTTTAAAACAAGTTTTGTTTT
GTTGGTTTTTGTTTATGTTGGTTTTGTTTTTTTATTGTGGTGTTGGTTGG
TTCTTGAGAAAACAATACATAAGACAAAGGTTGTTTGATAGATATAGCGT
TGTGAGGGGTTTCCAAGCTGGGAATTGCAGCATCATGGACCAGCTTCCTG
TTGAAGTGATTGGGAACATTCTGTCTCACTTGAGGGCTGCACGAGATGTG
GTGATAGCCTCTGCAACATGCAGGAAATGGCGACAAGCGTGCTGCAAACA
CCTTCATACCCTTTCATTCAGCTCCAAAGATTGGCCCATTTATCGAGATT
TGACGACTACCCGTCTCGAGATTTTGATCACACAAACCATTTTTCAGACC
TCAGGGTTGCAGGCTCTCTCCATTCTGATGGAAGATGTGGATGAATTCTC
GGCTTCAACGGTTACTGCTTGGCTCTTGTACACCAGGGAAACTTTGAGGC
AATTGCATTATAATGTCAAGACTATGCCTAATGTTAACATTCTTGAAATA
TGTGGCAGGCACAAGCTGGAAATTTTAGATCTTGCTCATAATTCTATTGT
GGGGGTTGAGCCTAATTATCAGCGATTCCCTTGCTTGAAGTCTCTTTCTC
TGAGTTATGTCAGTATATCTGCATTGGATCTGAATCTTCTGGTATATGCA
TGTCCGAAGATTGAAGTTTTGGAGCTTGTGAATCCTGAGATTGCAATGTC
TGATGCACAGGTGACTATTGAATTGAGTAGCTCAACGCTGAAGAGGGTGT
ATGTAGAAGCTATCAGTTTGGACAAGTTTATATTGGAGGCTGATGGGCTT
GAGACCTTGCACTTGAAAGATTGTGCACTTGAGTTCTTTGAACTCATTGG
CAAGGGGGCCTTGAAGCATTTCAAGATTGATGATGTTAGTGTTATACATC
TTGATATTGGCGAGACAGTTGAGGATCTTGAGACTGTGGATATCAGCAAC
TTCACAATTATATGGCCAAAGTTTTACCAGATGATTTCAAGATCATCAAA
TCTAAAGAGGCTTCGCCTCTGGGACGTGATGTTCGACGACGAGGATGAGG
TTGTGGATATGGAAACAATTGCAACTTGCTTTCCTTACCTCAGCCATTTA
TCTCTGAGTTATGATGTGAGATATGGAGTTCTTCACTATGGCTTACAAGG
CTCTTCCGATCTAGAGAATGTTGTTGTGTTGGAGCTTGGTTGGACTGTGA
TCAATGATCTTTTCTCCCATTGGGTTGAGGGGCTGCTTAAACGCTGTCCC
AATCTCAAGAAATTGGTGATTCATGGAGTTGTTTCTGAGGCAAAGTCTCA
TGAAGAATGCCAGATGTTAGCCAGTTTCACCACAGCAATGGTTGAGATGA
TGAGGAGATACATACATGTAGATCCACATTTTAAGTATGAATAGGATTTT
TGTTATATACCTTGCTATAGCTCATGCTTTCTATTAAGTCTAATTGTGTA
GGCACATTTGCAGGTAACTCATTCAATTCAAAAAGTTTATCCTCAACTTT
TAACTTGTTGTTTGGAATCTTCTGAAATCTGGGTGACTCACCAACAAAGA
TAGCTTCACGATACACATTCATAACTTCGACCACTTCTTAGTAGACAAAA
ATGGCCACGAACTAATCTGCAAATTTTACACTTTCATTTCTGTTCTGGGA
ATTCTGATCTTATAATTAAGACTGTAAAAGTAAATCATGAAGGCATTGTA
ACAGATTCAAGTTTTTAGGTAAGAGTGTTGTTATTGTAGCTGGCCTTCAA
TATCGTTGAAAGTATTTTTCTTAAGAGTTTCATATTCTTTTGTTTCTCTT
GTATTTAGATCTATTTTCTTAGCAGTTTCATACCTCAACTGACTTTTCAG
TAGTCTGATTTATTCACATATG
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Coding sequence (CDS) from alignment at Vu11:33417345..33419816+

>Vigun11g127100.3_Vu_IT97K-499-35_v1.1 ID=Vigun11g127100.3_Vu_IT97K-499-35_v1.1; Name=Vigun11g127100.3; organism=Vigna unguiculata; type=CDS; length=1254bp; location=Sequence derived from: Vu11:33417345..33419816+ (Vigna unguiculata
ATGGACCAGCTTCCTGTTGAAGTGATTGGGAACATTCTGTCTCACTTGAG
GGCTGCACGAGATGTGGTGATAGCCTCTGCAACATGCAGGAAATGGCGAC
AAGCGTGCTGCAAACACCTTCATACCCTTTCATTCAGCTCCAAAGATTGG
CCCATTTATCGAGATTTGACGACTACCCGTCTCGAGATTTTGATCACACA
AACCATTTTTCAGACCTCAGGGTTGCAGGCTCTCTCCATTCTGATGGAAG
ATGTGGATGAATTCTCGGCTTCAACGGTTACTGCTTGGCTCTTGTACACC
AGGGAAACTTTGAGGCAATTGCATTATAATGTCAAGACTATGCCTAATGT
TAACATTCTTGAAATATGTGGCAGGCACAAGCTGGAAATTTTAGATCTTG
CTCATAATTCTATTGTGGGGGTTGAGCCTAATTATCAGCGATTCCCTTGC
TTGAAGTCTCTTTCTCTGAGTTATGTCAGTATATCTGCATTGGATCTGAA
TCTTCTGGTATATGCATGTCCGAAGATTGAAGTTTTGGAGCTTGTGAATC
CTGAGATTGCAATGTCTGATGCACAGGTGACTATTGAATTGAGTAGCTCA
ACGCTGAAGAGGGTGTATGTAGAAGCTATCAGTTTGGACAAGTTTATATT
GGAGGCTGATGGGCTTGAGACCTTGCACTTGAAAGATTGTGCACTTGAGT
TCTTTGAACTCATTGGCAAGGGGGCCTTGAAGCATTTCAAGATTGATGAT
GTTAGTGTTATACATCTTGATATTGGCGAGACAGTTGAGGATCTTGAGAC
TGTGGATATCAGCAACTTCACAATTATATGGCCAAAGTTTTACCAGATGA
TTTCAAGATCATCAAATCTAAAGAGGCTTCGCCTCTGGGACGTGATGTTC
GACGACGAGGATGAGGTTGTGGATATGGAAACAATTGCAACTTGCTTTCC
TTACCTCAGCCATTTATCTCTGAGTTATGATGTGAGATATGGAGTTCTTC
ACTATGGCTTACAAGGCTCTTCCGATCTAGAGAATGTTGTTGTGTTGGAG
CTTGGTTGGACTGTGATCAATGATCTTTTCTCCCATTGGGTTGAGGGGCT
GCTTAAACGCTGTCCCAATCTCAAGAAATTGGTGATTCATGGAGTTGTTT
CTGAGGCAAAGTCTCATGAAGAATGCCAGATGTTAGCCAGTTTCACCACA
GCAATGGTTGAGATGATGAGGAGATACATACATGTAGATCCACATTTTAA
GTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR032675LRR_dom_sf
IPR036047F-box-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding