Phvul.006G080000.2

Transcript Overview
NamePhvul.006G080000.2
Unique NamePhvul.006G080000.2_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr06supercontigChr06:19194544..19195813 -Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvR259Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL157Pisum sativum Cameor genome v1aPisum sativum
pspvL497Pisum sativum Cameor genome v1aPisum sativum
pspvL503Pisum sativum Cameor genome v1aPisum sativum
pspvL505Pisum sativum Cameor genome v1aPisum sativum
pvvuR536Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR558Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caipvL0183Cicer arietinum ICC 4958 genome v2Cicer arietinum
caipvL0191Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL186Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
caipvL0589Cicer arietinum ICC 4958 genome v2Cicer arietinum
caipvL0608Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL277Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL145Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL236Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crpvL547Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crpvL551Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL464Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL474Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0037Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0734Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0744Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0199Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0486Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0716Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0960Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1385Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL215Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL817Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR504Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR525Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR540Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR558Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR570Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR583Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR534Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR552Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR483Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR509Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR470Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR495Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR623Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR650Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL137Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL444Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL453Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL133Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL610Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL793Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL136Cicer arietinum
carpvL226Cicer arietinum
carpvL452Cicer arietinum
carpvL461Cicer arietinum
ccapvL059Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL529Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL538Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR596Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR602Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR617Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR633Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR591Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR599Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR620Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR597Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR605Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR627Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR501Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR516Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR494Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR514Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigun08g135600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Psat5g147080.1Pisum sativum Cameor genome v1aPisum sativum
rna-XM_004490668.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Cr_11625.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vum_05G01337.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-TanjilR_18818Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_13186.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Cc_v2.0_00547.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
LR48_mrnaVigan09g138800Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Ca_03671.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigan.05G166400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Va09G043990.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigan.03G105200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Psat2g050560.1Pisum sativum Cameor genome v1aPisum sativum
Va07G016930.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-KK1_020303Cajanus cajan Asha genome v1.0Cajanus cajan
rna-KK1_005590Cajanus cajan Asha genome v1.0Cajanus cajan
jg51882.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr08.1472Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_022786648.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_004500327.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Cr_03825.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigst.05G131100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vfaba.Hedin2.R1.2g064240.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigst.03G073100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vfaba.Tiffany.R1.2g052120.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun08g135600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Ca_15671Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
LR48_mrnaVigan07g084400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
evm.model.Chr06.1041Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.1g185640.1Vicia faba cv. Tiffany genome v1.0Vicia faba
XM_058892016.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
jg34192.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun06g088800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vum_03G00826.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Ca_08913Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Psat02G0160400-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Cc_v2.0_11974.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigun06g088800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-TanjilR_24064Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Phvul.008G246000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr06.1001258Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.006G080000Phvul.006G080000_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G080000.2Phvul.006G080000.2_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.006G080000.2_Pv_G19833_v2.1Phvul.006G080000.2_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G080000.2.v2.1.five_prime_UTR.1Phvul.006G080000.2.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G080000.2.v2.1.CDS.1Phvul.006G080000.2.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G080000.2.v2.1.three_prime_UTR.1Phvul.006G080000.2.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


Homology
BLAST of Phvul.006G080000.2 vs. DB:Swiss
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum OX=4081 GN=PTI6 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 4.285e-23
Identity = 68/116 (58.62%), Postives = 76/116 (65.52%), Query Frame = 1
Query:  385 RNKFRGVRQRPWGRWTAEIRDPIQRKRVWLGTFYTXXXXXXXXXXXXXKLKGPDAVTNFPQVATVKRELKVSPPEATCSGEGFS--------SPTSVLAFCDGDSTPFDGFRYDEV 708
            R KFRGVRQRPWGRW AEIRDP + KRVWLGT+ T EEAA VYD+AAVKLKGPDAVTNFP   T +  + V+  E     +G          SPTSVL  CD D  PFD   + EV
Sbjct:   95 RKKFRGVRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFPVSTTAEVTVTVTETETESVADGGDKSENDVALSPTSVL--CDNDFAPFDNLGFCEV 208          
BLAST of Phvul.006G080000.2 vs. DB:Swiss
Match: CRF4_ARATH (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana OX=3702 GN=CRF4 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 4.181e-21
Identity = 57/100 (57.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query:  391 KFRGVRQRPWGRWTAEIRDPIQRKRVWLGTFYTXXXXXXXXXXXXXKLKGPDAVTNF---PQVATVKRE-------LKVSPPEATCSGEGFSSPTSVLAF 660
            K+RGVRQRPWG+W AEIRDP QR+R+WLGTF TAEEAA VYD AA+KL+GPDA+TNF   P+   V+ +       + VS  E+    +  SSPTSVL +
Sbjct:  117 KYRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNFTVQPEPEPVQEQEQEPESNMSVSISESMDDSQHLSSPTSVLNY 216          
BLAST of Phvul.006G080000.2 vs. DB:Swiss
Match: CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana OX=3702 GN=CRF3 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.536e-17
Identity = 45/57 (78.95%), Postives = 52/57 (91.23%), Query Frame = 1
Query:  391 KFRGVRQRPWGRWTAEIRDPIQRKRVWLGTFYTXXXXXXXXXXXXXKLKGPDAVTNF 561
            KFRGVRQRPWG+W AEIRDP QR+R+WLGTF TAEEAA VYD AA++L+GPDA+TNF
Sbjct:  124 KFRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNF 180          
BLAST of Phvul.006G080000.2 vs. DB:Swiss
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana OX=3702 GN=CRF1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.250e-17
Identity = 57/106 (53.77%), Postives = 65/106 (61.32%), Query Frame = 1
Query:  391 KFRGVRQRPWGRWTAEIRDPIQRKRVWLGTFYTXXXXXXXXXXXXXKLKGPDAVTNFP------QVATVKRELKVSPPEATCSGEGFSSPTSVLAFCDGDSTPFDG 690
            KFRGVRQRPWG+W AEIRDP +R RVWLGTF TAEEAA VYD AA++L+GP+A  NFP       V     E+K         GE   SP SVL       +PF G
Sbjct:   86 KFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPPPPVTENVEEASTEVKGVSDFIIGGGECLRSPVSVL------ESPFSG 185          
BLAST of Phvul.006G080000.2 vs. DB:Swiss
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana OX=3702 GN=CRF2 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.107e-16
Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 1
Query:  391 KFRGVRQRPWGRWTAEIRDPIQRKRVWLGTFYTXXXXXXXXXXXXXKLKGPDAVTNFPQVATVKRE 588
            KFRGVRQRPWG+W AEIRDP++R R+WLGT+ TAEEAA VYD AA++L+GPDA+TNF    T   E
Sbjct:  121 KFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVTPTTATE 186          
BLAST of Phvul.006G080000.2 vs. DB:Swiss
Match: CRF5_ARATH (Ethylene-responsive transcription factor CRF5 OS=Arabidopsis thaliana OX=3702 GN=CRF5 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.434e-14
Identity = 52/110 (47.27%), Postives = 63/110 (57.27%), Query Frame = 1
Query:  391 KFRGVRQRPWGRWTAEIRDPIQRKRVWLGTFYTXXXXXXXXXXXXXKLKGPDAVTNF------------PQVATVKRELKVSPPEATCSGEGFSSPTSVLAFCDGDSTPF 684
            K+RGVRQRPWG++ AEIRDP  R R+WLGTF TAEEAA  YD AA+++KG +A TNF            P+   +  E       A  S     SPTSVL F   D T +
Sbjct:   98 KYRGVRQRPWGKFAAEIRDPSSRTRLWLGTFATAEEAAIGYDRAAIRIKGHNAQTNFLTPPPSPTTEVLPETPVIDLETVSGCDSARESQISLCSPTSVLRFSHNDETEY 207          
BLAST of Phvul.006G080000.2 vs. DB:Swiss
Match: CRF6_ARATH (Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana OX=3702 GN=CRF6 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.634e-14
Identity = 52/100 (52.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query:  391 KFRGVRQRPWGRWTAEIRDPIQRKRVWLGTFYTXXXXXXXXXXXXXKLKGPDAVTNFPQVATVKRELKVSPPEATCSG----EGFSSPTSVLAFCDGDST 678
            K+RGVRQRPWG++ AEIRDP  R R+WLGTF TAEEAA  YD AA+ LKGP A+TNF    T    + +    A   G    +   SPTSVL F   + T
Sbjct:  104 KYRGVRQRPWGKFAAEIRDPSSRTRIWLGTFVTAEEAAIAYDRAAIHLKGPKALTNFLTPPTPTPVIDLQTVSACDYGRDSRQSLHSPTSVLRFNVNEET 203          
BLAST of Phvul.006G080000.2 vs. DB:Swiss
Match: ERF77_ARATH (Ethylene-responsive transcription factor 10 OS=Arabidopsis thaliana OX=3702 GN=ERF10 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.724e-14
Identity = 37/61 (60.66%), Postives = 49/61 (80.33%), Query Frame = 1
Query:  391 KFRGVRQRPWGRWTAEIRDPIQRKRVWLGTFYTXXXXXXXXXXXXXKLKGPDAVTNFPQVA 573
            ++RGVR+RPWGR+ AEIRDP+++KRVWLG+F T EEAA  YD AA++ +G  A TNFP + 
Sbjct:   52 RYRGVRRRPWGRYAAEIRDPVKKKRVWLGSFNTGEEAARAYDSAAIRFRGSKATTNFPLIG 112          
BLAST of Phvul.006G080000.2 vs. DB:Swiss
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana OX=3702 GN=ERF073 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.662e-14
Identity = 39/69 (56.52%), Postives = 51/69 (73.91%), Query Frame = 1
Query:  391 KFRGVRQRPWGRWTAEIRDPIQRKRVWLGTFYTXXXXXXXXXXXXXKLKGPDAVTNFPQVATVKRELKV 597
            +++G+R+RPWGRW AEIRDPI+  RVWLGTF TAEEAA  YD  A +++G  A  NFP  ++ KR+ K 
Sbjct:   24 RYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFPNESSGKRKAKA 92          
BLAST of Phvul.006G080000.2 vs. DB:Swiss
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana OX=3702 GN=ERF071 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.156e-14
Identity = 43/82 (52.44%), Postives = 54/82 (65.85%), Query Frame = 1
Query:  358 EKRPAAPRCRNKFRGVRQRPWGRWTAEIRDPIQRKRVWLGTFYTXXXXXXXXXXXXXKLKGPDAVTNFPQVATVKRELKVSP 603
            E+R      +N +RG+RQRPWG+W AEIRDP +  RVWLGTF TA+EAA  YD AA+K++G  A  NFP    V+ E    P
Sbjct:   38 EERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFPNT-QVEEEADTKP 118          
The following BLAST results are available for this feature:
BLAST of Phvul.006G080000.2 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PTI6_SOLLC4.285e-2358.62Pathogenesis-related genes transcriptional activat... [more]
CRF4_ARATH4.181e-2157.00Ethylene-responsive transcription factor CRF4 OS=A... [more]
CRF3_ARATH1.536e-1778.95Ethylene-responsive transcription factor CRF3 OS=A... [more]
CRF1_ARATH2.250e-1753.77Ethylene-responsive transcription factor CRF1 OS=A... [more]
CRF2_ARATH1.107e-1668.18Ethylene-responsive transcription factor CRF2 OS=A... [more]
CRF5_ARATH1.434e-1447.27Ethylene-responsive transcription factor CRF5 OS=A... [more]
CRF6_ARATH2.634e-1452.00Ethylene-responsive transcription factor CRF6 OS=A... [more]
ERF77_ARATH2.724e-1460.66Ethylene-responsive transcription factor 10 OS=Ara... [more]
ERF73_ARATH3.662e-1456.52Ethylene-responsive transcription factor ERF073 OS... [more]
ERF71_ARATH8.156e-1452.44Ethylene-responsive transcription factor ERF071 OS... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 132..143
score: 66.21
coord: 154..170
score: 65.67
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 131..194
e-value: 6.3E-36
score: 135.3
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 131..180
e-value: 2.7E-11
score: 43.5
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 131..188
score: 23.459
IPR001471AP2/ERF domainCDDcd00018AP2coord: 131..190
e-value: 2.32461E-33
score: 113.135
IPR017392AP2/ERF transcription factor ERF/PTI6PIRSFPIRSF038123PTI6coord: 21..239
e-value: 7.9E-50
score: 167.8
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10coord: 130..190
e-value: 1.3E-30
score: 107.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..76
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 131..188

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.006G080000.2_Pv_G19833_v2.1

>Phvul.006G080000.2_Pv_G19833_v2.1 ID=Phvul.006G080000.2_Pv_G19833_v2.1; Name=Phvul.006G080000.2_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=240bp
MTHTYQPFISLQPTMNLHHPFNPPTSTTKFYTHPPRKTPQKPQPRHNKLL
RVILTDHDATDSDSSGDDDTPKNPSKHKKVKREITHITISFPFIPQPPTP
TPTVTPPSFSTNPTPLTQPEKRPAAPRCRNKFRGVRQRPWGRWTAEIRDP
IQRKRVWLGTFYTAEEAAAVYDEAAVKLKGPDAVTNFPQVATVKRELKVS
PPEATCSGEGFSSPTSVLAFCDGDSTPFDGFRYDEVVRV*
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mRNA from alignment at Chr06:19194544..19195813-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.006G080000.2_Pv_G19833_v2.1 ID=Phvul.006G080000.2_Pv_G19833_v2.1; Name=Phvul.006G080000.2; organism=Phaseolus vulgaris; type=mRNA; length=1270bp; location=Sequence derived from: Chr06:19194544..19195813- (Phaseolus vulgaris
CTCTTCTTCTCTTTCCCGCCAACCTCACTCACCAACAACATCTCTCTCTC TCTTCCTTACCCTTTTGAATAACCACCCAAAGCCTCTCTCTTTCCTTTTC CCTCTTCCTTCATGCAATTAAAACCTTCACCTTTTTCCCTTTCTTCATCA TTCTCTTTGTTCAGATGACTCACACATACCAACCTTTCATCTCCCTCCAA CCAACCATGAACCTCCACCACCCCTTTAACCCACCCACCTCAACCACAAA ATTTTACACCCACCCACCTCGCAAAACCCCCCAAAAACCCCAACCACGCC ACAACAAGCTCCTCCGGGTCATCCTCACCGACCACGACGCCACCGACTCC GACTCCTCCGGCGACGATGACACTCCAAAAAACCCTTCAAAACACAAAAA AGTCAAAAGAGAAATCACCCACATCACCATAAGCTTTCCCTTTATCCCAC AACCCCCAACACCAACCCCAACTGTAACACCTCCTTCTTTTTCCACTAAC CCGACCCCTTTAACACAACCCGAGAAACGACCCGCCGCCCCTCGCTGCCG GAACAAGTTTCGAGGTGTCCGCCAGAGACCGTGGGGACGGTGGACCGCCG AGATCCGTGACCCGATCCAAAGAAAACGGGTCTGGCTCGGCACCTTCTAC ACGGCGGAGGAAGCCGCCGCCGTGTACGACGAGGCCGCAGTGAAGCTCAA GGGCCCTGACGCCGTCACCAACTTCCCCCAAGTCGCCACCGTTAAAAGAG AACTCAAAGTTTCGCCGCCGGAGGCCACCTGCTCCGGCGAGGGTTTCTCG TCGCCGACGTCCGTCCTTGCCTTCTGCGACGGTGACTCCACGCCGTTCGA CGGTTTCCGTTACGATGAGGTCGTTCGGGTTTGACATCGAAGCGCCGTTT AGTATGACAGACGTTAACTTGGGCGTGGTGAGTCAGCGCTTCGCGAAGGA AGAGTTCGGCGAGTTTGACCCGGACGAGTTCCTGACGTGGCCAAGTTAAG GACTATTAAGTCTTTTTCGCGAAAAACTCAAGGACTGTTTAGTAATTCTA CTAAGTTTTTGTCGTATTCGGTGTTTAGTGGAATTCCGAAACTACCCTCG TAACTAAGTTTTTGTGCAGCTTAGAAGAGTGTAGAATGCTAGAACAATAG TAGTGAGCATTTTGGTAATCTAGTTAGATAATTTTGTCCTGTGCTAGCTA ATTTGTGTAACTAATTTCAATCTTATGAAGAAAAAGAAAAAAGAGAGTGA AGAGTGAGTGAATATGATGG
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Coding sequence (CDS) from alignment at Chr06:19194544..19195813-

>Phvul.006G080000.2_Pv_G19833_v2.1 ID=Phvul.006G080000.2_Pv_G19833_v2.1; Name=Phvul.006G080000.2; organism=Phaseolus vulgaris; type=CDS; length=720bp; location=Sequence derived from: Chr06:19194544..19195813- (Phaseolus vulgaris
ATGACTCACACATACCAACCTTTCATCTCCCTCCAACCAACCATGAACCT
CCACCACCCCTTTAACCCACCCACCTCAACCACAAAATTTTACACCCACC
CACCTCGCAAAACCCCCCAAAAACCCCAACCACGCCACAACAAGCTCCTC
CGGGTCATCCTCACCGACCACGACGCCACCGACTCCGACTCCTCCGGCGA
CGATGACACTCCAAAAAACCCTTCAAAACACAAAAAAGTCAAAAGAGAAA
TCACCCACATCACCATAAGCTTTCCCTTTATCCCACAACCCCCAACACCA
ACCCCAACTGTAACACCTCCTTCTTTTTCCACTAACCCGACCCCTTTAAC
ACAACCCGAGAAACGACCCGCCGCCCCTCGCTGCCGGAACAAGTTTCGAG
GTGTCCGCCAGAGACCGTGGGGACGGTGGACCGCCGAGATCCGTGACCCG
ATCCAAAGAAAACGGGTCTGGCTCGGCACCTTCTACACGGCGGAGGAAGC
CGCCGCCGTGTACGACGAGGCCGCAGTGAAGCTCAAGGGCCCTGACGCCG
TCACCAACTTCCCCCAAGTCGCCACCGTTAAAAGAGAACTCAAAGTTTCG
CCGCCGGAGGCCACCTGCTCCGGCGAGGGTTTCTCGTCGCCGACGTCCGT
CCTTGCCTTCTGCGACGGTGACTCCACGCCGTTCGACGGTTTCCGTTACG
ATGAGGTCGTTCGGGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR017392AP2/ERF-transcript_factor
IPR036955AP2/ERF_dom_sf
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription