rna-TanjilR_13900

Transcript Overview
Namerna-TanjilR_13900
Unique Namerna-TanjilR_13900_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length285
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG09-CM007369.1supercontigChr_LG09-CM007369.1:17840699..17840983 -Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_13900gene-TanjilG_13900_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_13900rna-TanjilR_13900_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_13900_La_Tanjil_v1.0rna-TanjilR_13900_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_13900_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:17840699..17840983rna-TanjilR_13900_La_Tanjil_v1.0-CDS-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:17840699..17840983Lupinus angustifoliusCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_13900_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:17840699..17840983rna-TanjilR_13900_La_Tanjil_v1.0-exon-Chr_LG09-CM007369.1_La_Tanjil_v1.0-1579734366:17840699..17840983Lupinus angustifoliusexon


Homology
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_13900 vs.
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_13900_La_Tanjil_v1.0 ID=rna-TanjilR_13900_La_Tanjil_v1.0; Name=rna-TanjilR_13900; organism=Lupinus angustifolius; type=mRNA; length=285bp
ATGAAAGCTAAACAAAAGATAGTGGCCATGGCTGAGGAGGAGGAGCAACA
TAATGCAGTGGTGAAGATATATACCAAGTCAGAGACAAGGGTGAAAAACA
ACCTCCACAACCACAAGTTTCATGCAACTGTGATTCCAGCACCGAGGAAA
TCAGTGAAGAGAATGATGTTTGAGGAAATGCTCCAATTTCTAACTCGTCT
GTTCACCAACTCAAGGAAATTACTCCAACATGCACAAAACAAGGTGTCTC
AGAAAGACCAAAAAACACATATATCCCTTCAATAA
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protein sequence of rna-TanjilR_13900_La_Tanjil_v1.0

>rna-TanjilR_13900_La_Tanjil_v1.0 ID=rna-TanjilR_13900_La_Tanjil_v1.0; Name=rna-TanjilR_13900_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=94bp
MKAKQKIVAMAEEEEQHNAVVKIYTKSETRVKNNLHNHKFHATVIPAPRK
SVKRMMFEEMLQFLTRLFTNSRKLLQHAQNKVSQKDQKTHISLQ
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mRNA from alignment at Chr_LG09-CM007369.1:17840699..17840983-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_13900_La_Tanjil_v1.0 ID=rna-TanjilR_13900_La_Tanjil_v1.0; Name=rna-TanjilR_13900; organism=Lupinus angustifolius; type=mRNA; length=285bp; location=Sequence derived from: Chr_LG09-CM007369.1:17840699..17840983- (Lupinus angustifolius
ATGAAAGCTAAACAAAAGATAGTGGCCATGGCTGAGGAGGAGGAGCAACA
TAATGCAGTGGTGAAGATATATACCAAGTCAGAGACAAGGGTGAAAAACA
ACCTCCACAACCACAAGTTTCATGCAACTGTGATTCCAGCACCGAGGAAA
TCAGTGAAGAGAATGATGTTTGAGGAAATGCTCCAATTTCTAACTCGTCT
GTTCACCAACTCAAGGAAATTACTCCAACATGCACAAAACAAGGTGTCTC
AGAAAGACCAAAAAACACATATATCCCTTCAATAA
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Coding sequence (CDS) from alignment at Chr_LG09-CM007369.1:17840699..17840983-

>rna-TanjilR_13900_La_Tanjil_v1.0 ID=rna-TanjilR_13900_La_Tanjil_v1.0; Name=rna-TanjilR_13900; organism=Lupinus angustifolius; type=CDS; length=285bp; location=Sequence derived from: Chr_LG09-CM007369.1:17840699..17840983- (Lupinus angustifolius
ATGAAAGCTAAACAAAAGATAGTGGCCATGGCTGAGGAGGAGGAGCAACA
TAATGCAGTGGTGAAGATATATACCAAGTCAGAGACAAGGGTGAAAAACA
ACCTCCACAACCACAAGTTTCATGCAACTGTGATTCCAGCACCGAGGAAA
TCAGTGAAGAGAATGATGTTTGAGGAAATGCTCCAATTTCTAACTCGTCT
GTTCACCAACTCAAGGAAATTACTCCAACATGCACAAAACAAGGTGTCTC
AGAAAGACCAAAAAACACATATATCCCTTCAATAA
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