rna-TanjilR_28930
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of rna-TanjilR_28930 vs. DB:Swiss
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 3.441e-110 Identity = 146/356 (41.01%), Postives = 213/356 (59.83%), Query Frame = 3
Query: 9765 CVSFVGYTKGVKGFKF*DSVSRKVVLSRDVVFDEDFMMKQSVLTEVPMPNGETLRSNMIPMSNEMVQVNNDKELCTSSSQEHDD---------SQAES--SGVQEY-LLARDKDRHLIKPLESYDFEDMTT----VALYIIL---RDPCIFQDTINNQEKEQ*MGAMMDEMESLQKNQTWELIPLPPDKRVVGCKWVYKRKPAVSEKEGE----RFKTRLVAKGYSQQKGIDYNEIFSLVVRHTSIRVVLVLVASRDMHLEQMDVKTAFLHGELEEKIYMTQLKEFNATGQIHLVCKLKKSLYGLKQSPR*WYKRFNTYMLKLSYKHCEYDCCVYVRSLDDGSFIFMLLYVDDMLI 10763
C+ F+GY G++ D V +KV+ SRDVVF E V T M E +++ +IP + +N+ S++ E + Q E GV+E + +++H +PL + + + Y+++ R+P ++ +++ EK Q M AM +EMESLQKN T++L+ LP KR + CKWV+K K K+G+ R+K RLV KG+ Q+KGID++EIFS VV+ TSIR +L L AS D+ +EQ+DVKTAFLHG+LEE+IYM Q + F G+ H+VCKL KSLYGLKQ+PR WY +F+++M +Y D CVY + + +FI +LLYVDDMLI
Sbjct: 674 CI-FIGYGDEEFGYRLWDPVKKKVIRSRDVVFRE-----SEVRTAADM--SEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQH--QPLRRSERPRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLK-----KDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLI 1014 HSP 2 Score: 185.652 bits (470), Expect = 3.441e-110 Identity = 147/465 (31.61%), Postives = 212/465 (45.59%), Query Frame = 2
Query: 8450 YKCK*AEH*KRDCPNEWSPIKPVGKDEVSTSANVAQKDDSSYNNEVDLLFV-------------S*WILDTGCSHHMTPNKEWFTTYRADNFCFVYLRNNKTCGIIDMGEIRIVMDDGVVKMLCEVRHIPDLKKNLVSLETLQATGFIYRTDGDNDILRVCKCTLTVMKGKRTTGNTYKLLRRTIVGGVAEEILVDSDHGATKLWHMHVGHMSVCDMTKLCKR*LLTESTNAR*ICASIVCLRSKHKLVLRLTNTRLGAF*TISTLMYGDPLRNHP*EVLGILLPSLMTFLARSR-----YIF*NISQKSLPSSRF----ERQW*RTRLVEKSNT*GQMMVWSTKTQFQKFCEEHDIQRHFLVQKTPQ*NGVAERMNKTLTERARCMKLNSGLSKGFWAETLSMACYAINRSPRASLDGKVAEEAYTGNPVNYNMLCIFGCPTYVHVSSDDRSKLDPKSKMCIFC 9778
Y C H KRDCPN P K GK E S N NN+ +LF+ S W++DT SHH TP ++ F Y A +F V + N I +G+I I + G +L +VRH+PDL+ NL+S L G Y + N R+ K +L + KG G Y+ G E+ D + LWH +GHMS + L K+ L++ + +H++ + ++ R I L+Y D E +G +TF+ + YI Q +F ER+ R +S+ G+ T +F+++C H I+ V TPQ NGVAERMN+T+ E+ R M + L K FW E + ACY INRSP L ++ E +T V+Y+ L +FGC + HV + R+KLD KS CIF
Sbjct: 233 YNCNQPGHFKRDCPN---PRK--GKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDG--YESYFANQKWRLTKGSLVIAKGV-ARGTLYRTNAEICQG----ELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKL---NILDLVYSDVCGPMEIESMGGN-KYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEY----TSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFI 677 HSP 3 Score: 304.679 bits (779), Expect = 3.858e-82 Identity = 153/307 (49.84%), Postives = 210/307 (68.40%), Query Frame = 3
Query: 15984 INELKVMLGKEFDIKNLGATRKIIGMKIHRDRGARKLWLSQQSYVKKTLERFDMSNAKVVSTP-------------KTDEEKKYMSKVPYASAVGCLMYAIVCTRPDLAQAVNQVCKYMLKPGKQHWESVK*IFRYLKGTTSPGIMFDSQQSKPSIISYIDSDYARDLDDRRSTTGFIFTLTGGPIMWRTSVQSVVAMSTTEAEYMTASEASKEAL*LMGLVNELGIKQGGVPLHCDSQSVIFLAKNQVYHARTKHIDVRFHKIRELVACGQILLQKVHTSENATNMFSKPVTVDKFRHGLSLLNIH 16865
I +LK L K FD+K+LG ++I+GMKI R+R +RKLWLSQ+ Y+++ LERF+M NAK VSTP T EEK M+KVPY+SAVG LMYA+VCTRPD+A AV V +++ PGK+HWE+VK I RYL+GTT + F S P + Y D+D A D+D+R+S+TG++FT +GG I W++ +Q VA+STTEAEY+ A+E KE + L + ELG+ Q ++CDSQS I L+KN +YHARTKHIDVR+H IRE+V + + K+ T+EN +M +K V +KF L+ +H
Sbjct: 1022 IAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGG--SDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVGMH 1326 HSP 4 Score: 88.1965 bits (217), Expect = 1.312e-26 Identity = 56/111 (50.45%), Postives = 77/111 (69.37%), Query Frame = 1
Query: 8002 DLTSPREI*ETLEKRFMSKSLTNXXXXXXXXXXXXMQEGVD-LQHINNFNQVINDLQKLDVKVDDEDKAIILLCSLPNSYEHLVTTLTDGKNSIKLDEIISALLFHTQKRQ 8331
D + R I LE +MSK+LTNKLYLK LY L M EG + L H+N FN +I L L VK+++EDKAI+LL SLP+SY++L TT+ GK +I+L ++ SALL + + R+
Sbjct: 77 DEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNEKMRK 187 HSP 5 Score: 58.151 bits (139), Expect = 1.312e-26 Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 2
Query: 7784 SGVKFEVGKFDETGNFEL*QRRVKDVLAQQSLSKAL--RENKPEGMNQLD*EELKEKVAETIQLFLSDEVMYQVM 8002
SGVK+EV KF+ F QRR++D+L QQ L K L KP+ M D +L E+ A I+L LSD+V+ ++
Sbjct: 2 SGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIRLHLSDDVVNNII 76 HSP 6 Score: 88.9669 bits (219), Expect = 1.658e-15 Identity = 49/102 (48.04%), Postives = 69/102 (67.65%), Query Frame = 1
Query: 9109 IDLCKYCVLEKQT*VSFKADQHKTRGILDYIHSDVWGSTQEPSLGGSRYFVTFVDDFSRKV*IYFLKHKSEXXXXXXXXXXXXENQTGRKIKYMRSDDGMEY 9414
+ C YC+ KQ VSF+ + ILD ++SDV G + S+GG++YFVTF+DD SRK+ +Y LK K +VF F+ A+VE +TGRK+K +RSD+G EY
Sbjct: 454 VKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEY 555
BLAST of rna-TanjilR_28930 vs. DB:Swiss
Match: TF26_SCHPO (Transposon Tf2-6 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-6 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 9.814e-110 Identity = 142/476 (29.83%), Postives = 237/476 (49.79%), Query Frame = -3
Query: 11912 VLEILQHHCFVANAAKCKFGCRYVNYLGHVILGNGVAVDPGKVRCVLDWPEPKNVKGV*GFLGLIGYYRKFIRDYGKIAKPLTELTKKN-SFIWSFAALEAFQKLKTLMTTSPVLMLPDFTLPFEVGCDATGRGIGAVLMQNKR-----PISYFSKALSAGNLAKSAYEKELMALVLAIQHWRHYLLG--RPFVVYTDHKSLKDFLQQRVSSPDQQC--WLAKLLGYQFEVKYKPGLENKAADALSKYYDAVE------FTSMVSYLMWIDV-----EKLLQEVKHDASLPQVIEVLKADPSAKRGFSVH*GILFY-QGRXXXXXXXXXXXXXLKEFHSSTLGGHSGFLRIYRRLAANIYWSSMQKMVRDFVQACDTCQQQKYAAITPGGLLQPLPIPNVVWEDISLDFITGLPKYKGFNAILVVVDRLSKYSHFVLLKHPYTAKSVAELFVKEVVRLHGIPMFIINDRDPLFVTH 13273
VL+ L++ + N AKC+F V ++G+ I G + VL W +PKN K + FLG + Y RKFI ++ PL L KK+ + W+ +A + +K + + PVL DF+ + DA+ +GAVL Q P+ Y+S +S L S +KE++A++ +++HWRHYL PF + TDH++L + +++ W L + FE+ Y+PG N ADALS+ D E + ++++ I + +++ E +D L ++ D + + G+L + +++L +++ ++K++H H G + + W ++K ++++VQ C TCQ K P G LQP+P WE +S+DFIT LP+ G+NA+ VVVDR SK + V TA+ A +F + V+ G P II D D +F +
Sbjct: 585 VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058 HSP 2 Score: 141.354 bits (355), Expect = 9.814e-110 Identity = 68/177 (38.42%), Postives = 114/177 (64.41%), Query Frame = -2
Query: 13281 KMKLVAEHCPVNVRRYRYPHHQKDEIEKQVHELLKAGVIRPSMSAFSSLVILVKKNDGS*RICVDYRTLKKVTIPDKYHIPIVDELLDELYGANVFSKIDLRSGYHQIRVNETDIHKTAFKTHNGHYEYLVMPFGLMNAPATFQATMNDVFQPFLHSFVLVFFDDILVYSKSEEEHI 13811
+++L E+ + +R Y P + + ++++ LK+G+IR S + + V+ V K +G+ R+ VDY+ L K P+ Y +P++++LL ++ G+ +F+K+DL+S YH IRV + D HK AF+ G +EYLVMP+G+ APA FQ +N + S V+ + DDIL++SKSE EH+
Sbjct: 403 EVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHV 579 HSP 3 Score: 77.411 bits (189), Expect = 9.814e-110 Identity = 66/216 (30.56%), Postives = 100/216 (46.30%), Query Frame = -1
Query: 11305 YLLHMSSAYHPEM----EVVNRCLESYLRCFASDQPKSWSFWIP*AEFWYNTTFHVSIGTTPFEVVYGRSPP-SIIRFLSNESKVAAVALELVERDEALNQLKVHLLRTQQQMAKYADKKRRDV-KFAIGEWVFLKLRPHRQQSVVKRINQKLAPRFYGPFRVIAKMDEVAYKLQLSDHSKIHPF---FHVSLLKKAIGDYQVHGDLPKELDINPV 11925
+++ S Y P+ E N+ +E LRC S P +W I + YN H + TPFE+V+ SP S + S K + E + + +K HL +M KY D K +++ +F G+ V +K R ++ + KLAP F GPF V+ K Y+L L D K H F FHVS L+K + +++ E DI +
Sbjct: 1069 FVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETI---QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIK-HMFSSTFHVSHLEKYRHNSELNYATIDESDIGTI 1276
BLAST of rna-TanjilR_28930 vs. DB:Swiss
Match: TF25_SCHPO (Transposon Tf2-5 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-5 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 9.814e-110 Identity = 142/476 (29.83%), Postives = 237/476 (49.79%), Query Frame = -3
Query: 11912 VLEILQHHCFVANAAKCKFGCRYVNYLGHVILGNGVAVDPGKVRCVLDWPEPKNVKGV*GFLGLIGYYRKFIRDYGKIAKPLTELTKKN-SFIWSFAALEAFQKLKTLMTTSPVLMLPDFTLPFEVGCDATGRGIGAVLMQNKR-----PISYFSKALSAGNLAKSAYEKELMALVLAIQHWRHYLLG--RPFVVYTDHKSLKDFLQQRVSSPDQQC--WLAKLLGYQFEVKYKPGLENKAADALSKYYDAVE------FTSMVSYLMWIDV-----EKLLQEVKHDASLPQVIEVLKADPSAKRGFSVH*GILFY-QGRXXXXXXXXXXXXXLKEFHSSTLGGHSGFLRIYRRLAANIYWSSMQKMVRDFVQACDTCQQQKYAAITPGGLLQPLPIPNVVWEDISLDFITGLPKYKGFNAILVVVDRLSKYSHFVLLKHPYTAKSVAELFVKEVVRLHGIPMFIINDRDPLFVTH 13273
VL+ L++ + N AKC+F V ++G+ I G + VL W +PKN K + FLG + Y RKFI ++ PL L KK+ + W+ +A + +K + + PVL DF+ + DA+ +GAVL Q P+ Y+S +S L S +KE++A++ +++HWRHYL PF + TDH++L + +++ W L + FE+ Y+PG N ADALS+ D E + ++++ I + +++ E +D L ++ D + + G+L + +++L +++ ++K++H H G + + W ++K ++++VQ C TCQ K P G LQP+P WE +S+DFIT LP+ G+NA+ VVVDR SK + V TA+ A +F + V+ G P II D D +F +
Sbjct: 585 VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058 HSP 2 Score: 141.354 bits (355), Expect = 9.814e-110 Identity = 68/177 (38.42%), Postives = 114/177 (64.41%), Query Frame = -2
Query: 13281 KMKLVAEHCPVNVRRYRYPHHQKDEIEKQVHELLKAGVIRPSMSAFSSLVILVKKNDGS*RICVDYRTLKKVTIPDKYHIPIVDELLDELYGANVFSKIDLRSGYHQIRVNETDIHKTAFKTHNGHYEYLVMPFGLMNAPATFQATMNDVFQPFLHSFVLVFFDDILVYSKSEEEHI 13811
+++L E+ + +R Y P + + ++++ LK+G+IR S + + V+ V K +G+ R+ VDY+ L K P+ Y +P++++LL ++ G+ +F+K+DL+S YH IRV + D HK AF+ G +EYLVMP+G+ APA FQ +N + S V+ + DDIL++SKSE EH+
Sbjct: 403 EVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHV 579 HSP 3 Score: 77.411 bits (189), Expect = 9.814e-110 Identity = 66/216 (30.56%), Postives = 100/216 (46.30%), Query Frame = -1
Query: 11305 YLLHMSSAYHPEM----EVVNRCLESYLRCFASDQPKSWSFWIP*AEFWYNTTFHVSIGTTPFEVVYGRSPP-SIIRFLSNESKVAAVALELVERDEALNQLKVHLLRTQQQMAKYADKKRRDV-KFAIGEWVFLKLRPHRQQSVVKRINQKLAPRFYGPFRVIAKMDEVAYKLQLSDHSKIHPF---FHVSLLKKAIGDYQVHGDLPKELDINPV 11925
+++ S Y P+ E N+ +E LRC S P +W I + YN H + TPFE+V+ SP S + S K + E + + +K HL +M KY D K +++ +F G+ V +K R ++ + KLAP F GPF V+ K Y+L L D K H F FHVS L+K + +++ E DI +
Sbjct: 1069 FVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETI---QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIK-HMFSSTFHVSHLEKYRHNSELNYATIDESDIGTI 1276
BLAST of rna-TanjilR_28930 vs. DB:Swiss
Match: TF23_SCHPO (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 9.814e-110 Identity = 142/476 (29.83%), Postives = 237/476 (49.79%), Query Frame = -3
Query: 11912 VLEILQHHCFVANAAKCKFGCRYVNYLGHVILGNGVAVDPGKVRCVLDWPEPKNVKGV*GFLGLIGYYRKFIRDYGKIAKPLTELTKKN-SFIWSFAALEAFQKLKTLMTTSPVLMLPDFTLPFEVGCDATGRGIGAVLMQNKR-----PISYFSKALSAGNLAKSAYEKELMALVLAIQHWRHYLLG--RPFVVYTDHKSLKDFLQQRVSSPDQQC--WLAKLLGYQFEVKYKPGLENKAADALSKYYDAVE------FTSMVSYLMWIDV-----EKLLQEVKHDASLPQVIEVLKADPSAKRGFSVH*GILFY-QGRXXXXXXXXXXXXXLKEFHSSTLGGHSGFLRIYRRLAANIYWSSMQKMVRDFVQACDTCQQQKYAAITPGGLLQPLPIPNVVWEDISLDFITGLPKYKGFNAILVVVDRLSKYSHFVLLKHPYTAKSVAELFVKEVVRLHGIPMFIINDRDPLFVTH 13273
VL+ L++ + N AKC+F V ++G+ I G + VL W +PKN K + FLG + Y RKFI ++ PL L KK+ + W+ +A + +K + + PVL DF+ + DA+ +GAVL Q P+ Y+S +S L S +KE++A++ +++HWRHYL PF + TDH++L + +++ W L + FE+ Y+PG N ADALS+ D E + ++++ I + +++ E +D L ++ D + + G+L + +++L +++ ++K++H H G + + W ++K ++++VQ C TCQ K P G LQP+P WE +S+DFIT LP+ G+NA+ VVVDR SK + V TA+ A +F + V+ G P II D D +F +
Sbjct: 585 VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058 HSP 2 Score: 141.354 bits (355), Expect = 9.814e-110 Identity = 68/177 (38.42%), Postives = 114/177 (64.41%), Query Frame = -2
Query: 13281 KMKLVAEHCPVNVRRYRYPHHQKDEIEKQVHELLKAGVIRPSMSAFSSLVILVKKNDGS*RICVDYRTLKKVTIPDKYHIPIVDELLDELYGANVFSKIDLRSGYHQIRVNETDIHKTAFKTHNGHYEYLVMPFGLMNAPATFQATMNDVFQPFLHSFVLVFFDDILVYSKSEEEHI 13811
+++L E+ + +R Y P + + ++++ LK+G+IR S + + V+ V K +G+ R+ VDY+ L K P+ Y +P++++LL ++ G+ +F+K+DL+S YH IRV + D HK AF+ G +EYLVMP+G+ APA FQ +N + S V+ + DDIL++SKSE EH+
Sbjct: 403 EVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHV 579 HSP 3 Score: 77.411 bits (189), Expect = 9.814e-110 Identity = 66/216 (30.56%), Postives = 100/216 (46.30%), Query Frame = -1
Query: 11305 YLLHMSSAYHPEM----EVVNRCLESYLRCFASDQPKSWSFWIP*AEFWYNTTFHVSIGTTPFEVVYGRSPP-SIIRFLSNESKVAAVALELVERDEALNQLKVHLLRTQQQMAKYADKKRRDV-KFAIGEWVFLKLRPHRQQSVVKRINQKLAPRFYGPFRVIAKMDEVAYKLQLSDHSKIHPF---FHVSLLKKAIGDYQVHGDLPKELDINPV 11925
+++ S Y P+ E N+ +E LRC S P +W I + YN H + TPFE+V+ SP S + S K + E + + +K HL +M KY D K +++ +F G+ V +K R ++ + KLAP F GPF V+ K Y+L L D K H F FHVS L+K + +++ E DI +
Sbjct: 1069 FVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETI---QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIK-HMFSSTFHVSHLEKYRHNSELNYATIDESDIGTI 1276
BLAST of rna-TanjilR_28930 vs. DB:Swiss
Match: TF212_SCHPO (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 9.814e-110 Identity = 142/476 (29.83%), Postives = 237/476 (49.79%), Query Frame = -3
Query: 11912 VLEILQHHCFVANAAKCKFGCRYVNYLGHVILGNGVAVDPGKVRCVLDWPEPKNVKGV*GFLGLIGYYRKFIRDYGKIAKPLTELTKKN-SFIWSFAALEAFQKLKTLMTTSPVLMLPDFTLPFEVGCDATGRGIGAVLMQNKR-----PISYFSKALSAGNLAKSAYEKELMALVLAIQHWRHYLLG--RPFVVYTDHKSLKDFLQQRVSSPDQQC--WLAKLLGYQFEVKYKPGLENKAADALSKYYDAVE------FTSMVSYLMWIDV-----EKLLQEVKHDASLPQVIEVLKADPSAKRGFSVH*GILFY-QGRXXXXXXXXXXXXXLKEFHSSTLGGHSGFLRIYRRLAANIYWSSMQKMVRDFVQACDTCQQQKYAAITPGGLLQPLPIPNVVWEDISLDFITGLPKYKGFNAILVVVDRLSKYSHFVLLKHPYTAKSVAELFVKEVVRLHGIPMFIINDRDPLFVTH 13273
VL+ L++ + N AKC+F V ++G+ I G + VL W +PKN K + FLG + Y RKFI ++ PL L KK+ + W+ +A + +K + + PVL DF+ + DA+ +GAVL Q P+ Y+S +S L S +KE++A++ +++HWRHYL PF + TDH++L + +++ W L + FE+ Y+PG N ADALS+ D E + ++++ I + +++ E +D L ++ D + + G+L + +++L +++ ++K++H H G + + W ++K ++++VQ C TCQ K P G LQP+P WE +S+DFIT LP+ G+NA+ VVVDR SK + V TA+ A +F + V+ G P II D D +F +
Sbjct: 585 VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058 HSP 2 Score: 141.354 bits (355), Expect = 9.814e-110 Identity = 68/177 (38.42%), Postives = 114/177 (64.41%), Query Frame = -2
Query: 13281 KMKLVAEHCPVNVRRYRYPHHQKDEIEKQVHELLKAGVIRPSMSAFSSLVILVKKNDGS*RICVDYRTLKKVTIPDKYHIPIVDELLDELYGANVFSKIDLRSGYHQIRVNETDIHKTAFKTHNGHYEYLVMPFGLMNAPATFQATMNDVFQPFLHSFVLVFFDDILVYSKSEEEHI 13811
+++L E+ + +R Y P + + ++++ LK+G+IR S + + V+ V K +G+ R+ VDY+ L K P+ Y +P++++LL ++ G+ +F+K+DL+S YH IRV + D HK AF+ G +EYLVMP+G+ APA FQ +N + S V+ + DDIL++SKSE EH+
Sbjct: 403 EVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHV 579 HSP 3 Score: 77.411 bits (189), Expect = 9.814e-110 Identity = 66/216 (30.56%), Postives = 100/216 (46.30%), Query Frame = -1
Query: 11305 YLLHMSSAYHPEM----EVVNRCLESYLRCFASDQPKSWSFWIP*AEFWYNTTFHVSIGTTPFEVVYGRSPP-SIIRFLSNESKVAAVALELVERDEALNQLKVHLLRTQQQMAKYADKKRRDV-KFAIGEWVFLKLRPHRQQSVVKRINQKLAPRFYGPFRVIAKMDEVAYKLQLSDHSKIHPF---FHVSLLKKAIGDYQVHGDLPKELDINPV 11925
+++ S Y P+ E N+ +E LRC S P +W I + YN H + TPFE+V+ SP S + S K + E + + +K HL +M KY D K +++ +F G+ V +K R ++ + KLAP F GPF V+ K Y+L L D K H F FHVS L+K + +++ E DI +
Sbjct: 1069 FVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETI---QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIK-HMFSSTFHVSHLEKYRHNSELNYATIDESDIGTI 1276
BLAST of rna-TanjilR_28930 vs. DB:Swiss
Match: TF29_SCHPO (Transposon Tf2-9 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-9 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.102e-109 Identity = 142/476 (29.83%), Postives = 237/476 (49.79%), Query Frame = -3
Query: 11912 VLEILQHHCFVANAAKCKFGCRYVNYLGHVILGNGVAVDPGKVRCVLDWPEPKNVKGV*GFLGLIGYYRKFIRDYGKIAKPLTELTKKN-SFIWSFAALEAFQKLKTLMTTSPVLMLPDFTLPFEVGCDATGRGIGAVLMQNKR-----PISYFSKALSAGNLAKSAYEKELMALVLAIQHWRHYLLG--RPFVVYTDHKSLKDFLQQRVSSPDQQC--WLAKLLGYQFEVKYKPGLENKAADALSKYYDAVE------FTSMVSYLMWIDV-----EKLLQEVKHDASLPQVIEVLKADPSAKRGFSVH*GILFY-QGRXXXXXXXXXXXXXLKEFHSSTLGGHSGFLRIYRRLAANIYWSSMQKMVRDFVQACDTCQQQKYAAITPGGLLQPLPIPNVVWEDISLDFITGLPKYKGFNAILVVVDRLSKYSHFVLLKHPYTAKSVAELFVKEVVRLHGIPMFIINDRDPLFVTH 13273
VL+ L++ + N AKC+F V ++G+ I G + VL W +PKN K + FLG + Y RKFI ++ PL L KK+ + W+ +A + +K + + PVL DF+ + DA+ +GAVL Q P+ Y+S +S L S +KE++A++ +++HWRHYL PF + TDH++L + +++ W L + FE+ Y+PG N ADALS+ D E + ++++ I + +++ E +D L ++ D + + G+L + +++L +++ ++K++H H G + + W ++K ++++VQ C TCQ K P G LQP+P WE +S+DFIT LP+ G+NA+ VVVDR SK + V TA+ A +F + V+ G P II D D +F +
Sbjct: 585 VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058 HSP 2 Score: 141.354 bits (355), Expect = 1.102e-109 Identity = 68/177 (38.42%), Postives = 114/177 (64.41%), Query Frame = -2
Query: 13281 KMKLVAEHCPVNVRRYRYPHHQKDEIEKQVHELLKAGVIRPSMSAFSSLVILVKKNDGS*RICVDYRTLKKVTIPDKYHIPIVDELLDELYGANVFSKIDLRSGYHQIRVNETDIHKTAFKTHNGHYEYLVMPFGLMNAPATFQATMNDVFQPFLHSFVLVFFDDILVYSKSEEEHI 13811
+++L E+ + +R Y P + + ++++ LK+G+IR S + + V+ V K +G+ R+ VDY+ L K P+ Y +P++++LL ++ G+ +F+K+DL+S YH IRV + D HK AF+ G +EYLVMP+G+ APA FQ +N + S V+ + DDIL++SKSE EH+
Sbjct: 403 EVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHV 579 HSP 3 Score: 77.411 bits (189), Expect = 1.102e-109 Identity = 66/216 (30.56%), Postives = 100/216 (46.30%), Query Frame = -1
Query: 11305 YLLHMSSAYHPEM----EVVNRCLESYLRCFASDQPKSWSFWIP*AEFWYNTTFHVSIGTTPFEVVYGRSPP-SIIRFLSNESKVAAVALELVERDEALNQLKVHLLRTQQQMAKYADKKRRDV-KFAIGEWVFLKLRPHRQQSVVKRINQKLAPRFYGPFRVIAKMDEVAYKLQLSDHSKIHPF---FHVSLLKKAIGDYQVHGDLPKELDINPV 11925
+++ S Y P+ E N+ +E LRC S P +W I + YN H + TPFE+V+ SP S + S K + E + + +K HL +M KY D K +++ +F G+ V +K R ++ + KLAP F GPF V+ K Y+L L D K H F FHVS L+K + +++ E DI +
Sbjct: 1069 FVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETI---QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIK-HMFSSTFHVSHLEKYRHNSELNYATIDESDIGTI 1276
BLAST of rna-TanjilR_28930 vs. DB:Swiss
Match: TF24_SCHPO (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.102e-109 Identity = 142/476 (29.83%), Postives = 237/476 (49.79%), Query Frame = -3
Query: 11912 VLEILQHHCFVANAAKCKFGCRYVNYLGHVILGNGVAVDPGKVRCVLDWPEPKNVKGV*GFLGLIGYYRKFIRDYGKIAKPLTELTKKN-SFIWSFAALEAFQKLKTLMTTSPVLMLPDFTLPFEVGCDATGRGIGAVLMQNKR-----PISYFSKALSAGNLAKSAYEKELMALVLAIQHWRHYLLG--RPFVVYTDHKSLKDFLQQRVSSPDQQC--WLAKLLGYQFEVKYKPGLENKAADALSKYYDAVE------FTSMVSYLMWIDV-----EKLLQEVKHDASLPQVIEVLKADPSAKRGFSVH*GILFY-QGRXXXXXXXXXXXXXLKEFHSSTLGGHSGFLRIYRRLAANIYWSSMQKMVRDFVQACDTCQQQKYAAITPGGLLQPLPIPNVVWEDISLDFITGLPKYKGFNAILVVVDRLSKYSHFVLLKHPYTAKSVAELFVKEVVRLHGIPMFIINDRDPLFVTH 13273
VL+ L++ + N AKC+F V ++G+ I G + VL W +PKN K + FLG + Y RKFI ++ PL L KK+ + W+ +A + +K + + PVL DF+ + DA+ +GAVL Q P+ Y+S +S L S +KE++A++ +++HWRHYL PF + TDH++L + +++ W L + FE+ Y+PG N ADALS+ D E + ++++ I + +++ E +D L ++ D + + G+L + +++L +++ ++K++H H G + + W ++K ++++VQ C TCQ K P G LQP+P WE +S+DFIT LP+ G+NA+ VVVDR SK + V TA+ A +F + V+ G P II D D +F +
Sbjct: 585 VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058 HSP 2 Score: 141.354 bits (355), Expect = 1.102e-109 Identity = 68/177 (38.42%), Postives = 114/177 (64.41%), Query Frame = -2
Query: 13281 KMKLVAEHCPVNVRRYRYPHHQKDEIEKQVHELLKAGVIRPSMSAFSSLVILVKKNDGS*RICVDYRTLKKVTIPDKYHIPIVDELLDELYGANVFSKIDLRSGYHQIRVNETDIHKTAFKTHNGHYEYLVMPFGLMNAPATFQATMNDVFQPFLHSFVLVFFDDILVYSKSEEEHI 13811
+++L E+ + +R Y P + + ++++ LK+G+IR S + + V+ V K +G+ R+ VDY+ L K P+ Y +P++++LL ++ G+ +F+K+DL+S YH IRV + D HK AF+ G +EYLVMP+G+ APA FQ +N + S V+ + DDIL++SKSE EH+
Sbjct: 403 EVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHV 579 HSP 3 Score: 77.411 bits (189), Expect = 1.102e-109 Identity = 66/216 (30.56%), Postives = 100/216 (46.30%), Query Frame = -1
Query: 11305 YLLHMSSAYHPEM----EVVNRCLESYLRCFASDQPKSWSFWIP*AEFWYNTTFHVSIGTTPFEVVYGRSPP-SIIRFLSNESKVAAVALELVERDEALNQLKVHLLRTQQQMAKYADKKRRDV-KFAIGEWVFLKLRPHRQQSVVKRINQKLAPRFYGPFRVIAKMDEVAYKLQLSDHSKIHPF---FHVSLLKKAIGDYQVHGDLPKELDINPV 11925
+++ S Y P+ E N+ +E LRC S P +W I + YN H + TPFE+V+ SP S + S K + E + + +K HL +M KY D K +++ +F G+ V +K R ++ + KLAP F GPF V+ K Y+L L D K H F FHVS L+K + +++ E DI +
Sbjct: 1069 FVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETI---QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIK-HMFSSTFHVSHLEKYRHNSELNYATIDESDIGTI 1276
BLAST of rna-TanjilR_28930 vs. DB:Swiss
Match: TF22_SCHPO (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.102e-109 Identity = 142/476 (29.83%), Postives = 237/476 (49.79%), Query Frame = -3
Query: 11912 VLEILQHHCFVANAAKCKFGCRYVNYLGHVILGNGVAVDPGKVRCVLDWPEPKNVKGV*GFLGLIGYYRKFIRDYGKIAKPLTELTKKN-SFIWSFAALEAFQKLKTLMTTSPVLMLPDFTLPFEVGCDATGRGIGAVLMQNKR-----PISYFSKALSAGNLAKSAYEKELMALVLAIQHWRHYLLG--RPFVVYTDHKSLKDFLQQRVSSPDQQC--WLAKLLGYQFEVKYKPGLENKAADALSKYYDAVE------FTSMVSYLMWIDV-----EKLLQEVKHDASLPQVIEVLKADPSAKRGFSVH*GILFY-QGRXXXXXXXXXXXXXLKEFHSSTLGGHSGFLRIYRRLAANIYWSSMQKMVRDFVQACDTCQQQKYAAITPGGLLQPLPIPNVVWEDISLDFITGLPKYKGFNAILVVVDRLSKYSHFVLLKHPYTAKSVAELFVKEVVRLHGIPMFIINDRDPLFVTH 13273
VL+ L++ + N AKC+F V ++G+ I G + VL W +PKN K + FLG + Y RKFI ++ PL L KK+ + W+ +A + +K + + PVL DF+ + DA+ +GAVL Q P+ Y+S +S L S +KE++A++ +++HWRHYL PF + TDH++L + +++ W L + FE+ Y+PG N ADALS+ D E + ++++ I + +++ E +D L ++ D + + G+L + +++L +++ ++K++H H G + + W ++K ++++VQ C TCQ K P G LQP+P WE +S+DFIT LP+ G+NA+ VVVDR SK + V TA+ A +F + V+ G P II D D +F +
Sbjct: 585 VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058 HSP 2 Score: 141.354 bits (355), Expect = 1.102e-109 Identity = 68/177 (38.42%), Postives = 114/177 (64.41%), Query Frame = -2
Query: 13281 KMKLVAEHCPVNVRRYRYPHHQKDEIEKQVHELLKAGVIRPSMSAFSSLVILVKKNDGS*RICVDYRTLKKVTIPDKYHIPIVDELLDELYGANVFSKIDLRSGYHQIRVNETDIHKTAFKTHNGHYEYLVMPFGLMNAPATFQATMNDVFQPFLHSFVLVFFDDILVYSKSEEEHI 13811
+++L E+ + +R Y P + + ++++ LK+G+IR S + + V+ V K +G+ R+ VDY+ L K P+ Y +P++++LL ++ G+ +F+K+DL+S YH IRV + D HK AF+ G +EYLVMP+G+ APA FQ +N + S V+ + DDIL++SKSE EH+
Sbjct: 403 EVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHV 579 HSP 3 Score: 77.411 bits (189), Expect = 1.102e-109 Identity = 66/216 (30.56%), Postives = 100/216 (46.30%), Query Frame = -1
Query: 11305 YLLHMSSAYHPEM----EVVNRCLESYLRCFASDQPKSWSFWIP*AEFWYNTTFHVSIGTTPFEVVYGRSPP-SIIRFLSNESKVAAVALELVERDEALNQLKVHLLRTQQQMAKYADKKRRDV-KFAIGEWVFLKLRPHRQQSVVKRINQKLAPRFYGPFRVIAKMDEVAYKLQLSDHSKIHPF---FHVSLLKKAIGDYQVHGDLPKELDINPV 11925
+++ S Y P+ E N+ +E LRC S P +W I + YN H + TPFE+V+ SP S + S K + E + + +K HL +M KY D K +++ +F G+ V +K R ++ + KLAP F GPF V+ K Y+L L D K H F FHVS L+K + +++ E DI +
Sbjct: 1069 FVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETI---QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIK-HMFSSTFHVSHLEKYRHNSELNYATIDESDIGTI 1276
BLAST of rna-TanjilR_28930 vs. DB:Swiss
Match: TF21_SCHPO (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.102e-109 Identity = 142/476 (29.83%), Postives = 237/476 (49.79%), Query Frame = -3
Query: 11912 VLEILQHHCFVANAAKCKFGCRYVNYLGHVILGNGVAVDPGKVRCVLDWPEPKNVKGV*GFLGLIGYYRKFIRDYGKIAKPLTELTKKN-SFIWSFAALEAFQKLKTLMTTSPVLMLPDFTLPFEVGCDATGRGIGAVLMQNKR-----PISYFSKALSAGNLAKSAYEKELMALVLAIQHWRHYLLG--RPFVVYTDHKSLKDFLQQRVSSPDQQC--WLAKLLGYQFEVKYKPGLENKAADALSKYYDAVE------FTSMVSYLMWIDV-----EKLLQEVKHDASLPQVIEVLKADPSAKRGFSVH*GILFY-QGRXXXXXXXXXXXXXLKEFHSSTLGGHSGFLRIYRRLAANIYWSSMQKMVRDFVQACDTCQQQKYAAITPGGLLQPLPIPNVVWEDISLDFITGLPKYKGFNAILVVVDRLSKYSHFVLLKHPYTAKSVAELFVKEVVRLHGIPMFIINDRDPLFVTH 13273
VL+ L++ + N AKC+F V ++G+ I G + VL W +PKN K + FLG + Y RKFI ++ PL L KK+ + W+ +A + +K + + PVL DF+ + DA+ +GAVL Q P+ Y+S +S L S +KE++A++ +++HWRHYL PF + TDH++L + +++ W L + FE+ Y+PG N ADALS+ D E + ++++ I + +++ E +D L ++ D + + G+L + +++L +++ ++K++H H G + + W ++K ++++VQ C TCQ K P G LQP+P WE +S+DFIT LP+ G+NA+ VVVDR SK + V TA+ A +F + V+ G P II D D +F +
Sbjct: 585 VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058 HSP 2 Score: 141.354 bits (355), Expect = 1.102e-109 Identity = 68/177 (38.42%), Postives = 114/177 (64.41%), Query Frame = -2
Query: 13281 KMKLVAEHCPVNVRRYRYPHHQKDEIEKQVHELLKAGVIRPSMSAFSSLVILVKKNDGS*RICVDYRTLKKVTIPDKYHIPIVDELLDELYGANVFSKIDLRSGYHQIRVNETDIHKTAFKTHNGHYEYLVMPFGLMNAPATFQATMNDVFQPFLHSFVLVFFDDILVYSKSEEEHI 13811
+++L E+ + +R Y P + + ++++ LK+G+IR S + + V+ V K +G+ R+ VDY+ L K P+ Y +P++++LL ++ G+ +F+K+DL+S YH IRV + D HK AF+ G +EYLVMP+G+ APA FQ +N + S V+ + DDIL++SKSE EH+
Sbjct: 403 EVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHV 579 HSP 3 Score: 77.411 bits (189), Expect = 1.102e-109 Identity = 66/216 (30.56%), Postives = 100/216 (46.30%), Query Frame = -1
Query: 11305 YLLHMSSAYHPEM----EVVNRCLESYLRCFASDQPKSWSFWIP*AEFWYNTTFHVSIGTTPFEVVYGRSPP-SIIRFLSNESKVAAVALELVERDEALNQLKVHLLRTQQQMAKYADKKRRDV-KFAIGEWVFLKLRPHRQQSVVKRINQKLAPRFYGPFRVIAKMDEVAYKLQLSDHSKIHPF---FHVSLLKKAIGDYQVHGDLPKELDINPV 11925
+++ S Y P+ E N+ +E LRC S P +W I + YN H + TPFE+V+ SP S + S K + E + + +K HL +M KY D K +++ +F G+ V +K R ++ + KLAP F GPF V+ K Y+L L D K H F FHVS L+K + +++ E DI +
Sbjct: 1069 FVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETI---QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIK-HMFSSTFHVSHLEKYRHNSELNYATIDESDIGTI 1276
BLAST of rna-TanjilR_28930 vs. DB:Swiss
Match: TF211_SCHPO (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.433e-109 Identity = 142/476 (29.83%), Postives = 237/476 (49.79%), Query Frame = -3
Query: 11912 VLEILQHHCFVANAAKCKFGCRYVNYLGHVILGNGVAVDPGKVRCVLDWPEPKNVKGV*GFLGLIGYYRKFIRDYGKIAKPLTELTKKN-SFIWSFAALEAFQKLKTLMTTSPVLMLPDFTLPFEVGCDATGRGIGAVLMQNKR-----PISYFSKALSAGNLAKSAYEKELMALVLAIQHWRHYLLG--RPFVVYTDHKSLKDFLQQRVSSPDQQC--WLAKLLGYQFEVKYKPGLENKAADALSKYYDAVE------FTSMVSYLMWIDV-----EKLLQEVKHDASLPQVIEVLKADPSAKRGFSVH*GILFY-QGRXXXXXXXXXXXXXLKEFHSSTLGGHSGFLRIYRRLAANIYWSSMQKMVRDFVQACDTCQQQKYAAITPGGLLQPLPIPNVVWEDISLDFITGLPKYKGFNAILVVVDRLSKYSHFVLLKHPYTAKSVAELFVKEVVRLHGIPMFIINDRDPLFVTH 13273
VL+ L++ + N AKC+F V ++G+ I G + VL W +PKN K + FLG + Y RKFI ++ PL L KK+ + W+ +A + +K + + PVL DF+ + DA+ +GAVL Q P+ Y+S +S L S +KE++A++ +++HWRHYL PF + TDH++L + +++ W L + FE+ Y+PG N ADALS+ D E + ++++ I + +++ E +D L ++ D + + G+L + +++L +++ ++K++H H G + + W ++K ++++VQ C TCQ K P G LQP+P WE +S+DFIT LP+ G+NA+ VVVDR SK + V TA+ A +F + V+ G P II D D +F +
Sbjct: 585 VLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLN--NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058 HSP 2 Score: 138.658 bits (348), Expect = 6.433e-109 Identity = 67/177 (37.85%), Postives = 114/177 (64.41%), Query Frame = -2
Query: 13281 KMKLVAEHCPVNVRRYRYPHHQKDEIEKQVHELLKAGVIRPSMSAFSSLVILVKKNDGS*RICVDYRTLKKVTIPDKYHIPIVDELLDELYGANVFSKIDLRSGYHQIRVNETDIHKTAFKTHNGHYEYLVMPFGLMNAPATFQATMNDVFQPFLHSFVLVFFDDILVYSKSEEEHI 13811
+++L E+ + +R Y P + + ++++ LK+G+IR S + + V+ V K +G+ R+ VDY+ L K P+ Y +P++++LL ++ G+ +F+K+DL+S YH IRV + D HK AF+ G +EYLVMP+G+ APA FQ +N + S V+ + D+IL++SKSE EH+
Sbjct: 403 EVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSKSESEHV 579 HSP 3 Score: 77.411 bits (189), Expect = 6.433e-109 Identity = 66/216 (30.56%), Postives = 100/216 (46.30%), Query Frame = -1
Query: 11305 YLLHMSSAYHPEM----EVVNRCLESYLRCFASDQPKSWSFWIP*AEFWYNTTFHVSIGTTPFEVVYGRSPP-SIIRFLSNESKVAAVALELVERDEALNQLKVHLLRTQQQMAKYADKKRRDV-KFAIGEWVFLKLRPHRQQSVVKRINQKLAPRFYGPFRVIAKMDEVAYKLQLSDHSKIHPF---FHVSLLKKAIGDYQVHGDLPKELDINPV 11925
+++ S Y P+ E N+ +E LRC S P +W I + YN H + TPFE+V+ SP S + S K + E + + +K HL +M KY D K +++ +F G+ V +K R ++ + KLAP F GPF V+ K Y+L L D K H F FHVS L+K + +++ E DI +
Sbjct: 1069 FVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETI---QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIK-HMFSSTFHVSHLEKYRHNSELNYATIDESDIGTI 1276 The following BLAST results are available for this feature:
BLAST of rna-TanjilR_28930 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-TanjilR_28930_La_Tanjil_v1.0 ID=rna-TanjilR_28930_La_Tanjil_v1.0; Name=rna-TanjilR_28930; organism=Lupinus angustifolius; type=mRNA; length=18690bpback to top protein sequence of rna-TanjilR_28930_La_Tanjil_v1.0 >rna-TanjilR_28930_La_Tanjil_v1.0 ID=rna-TanjilR_28930_La_Tanjil_v1.0; Name=rna-TanjilR_28930_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=270bpback to top mRNA from alignment at Chr_LG15-CM007375.1:6045692..6064381+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>rna-TanjilR_28930_La_Tanjil_v1.0 ID=rna-TanjilR_28930_La_Tanjil_v1.0; Name=rna-TanjilR_28930; organism=Lupinus angustifolius; type=mRNA; length=18690bp; location=Sequence derived from: Chr_LG15-CM007375.1:6045692..6064381+ (Lupinus angustifoliusback to top Coding sequence (CDS) from alignment at Chr_LG15-CM007375.1:6045692..6064381+ >rna-TanjilR_28930_La_Tanjil_v1.0 ID=rna-TanjilR_28930_La_Tanjil_v1.0; Name=rna-TanjilR_28930; organism=Lupinus angustifolius; type=CDS; length=813bp; location=Sequence derived from: Chr_LG15-CM007375.1:6045692..6064381+ (Lupinus angustifoliusback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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