rna-TanjilR_01595

Transcript Overview


Name	rna-TanjilR_01595
Unique Name	rna-TanjilR_01595_La_Tanjil_v1.0
Type	mRNA
Organism	Lupinus angustifolius (blue lupin)
Sequence length	3985
Product	hypothetical protein

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr_LG20-CM007380.1	supercontig	Chr_LG20-CM007380.1:20595607..20599591 +	Lupinus angustifolius L. Tanjil genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Lupinus angustifolius L. Tanjil genome v1.0	2019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.0	2020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot	2020-01-28

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
ananL086	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ananR489	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ananR500	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ancaiR0776	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
ancaiR0784	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
ancaR0667	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
anccR0833	Cajanus cajan Asha genome v1.0	Cajanus cajan
ancrR0861	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
anpsR0554	Pisum sativum Cameor genome v1a	Pisum sativum
anpvR0776	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
anvuR0664	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
anasR0746	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anzwsR0637	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
antifR0658	Vicia faba cv. Tiffany genome v1.0	Vicia faba
anvfhR0656	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
anvrvR0634	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
anvrvR0653	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
anvuaR0632	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
anvssR0732	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ancanR0614	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
anavjR0698	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anavjR0749	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
ancarR0651		Cicer arietinum
anccaR0682	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
anccaR0691	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
anvumR0762	Vigna umbellata FF25 genome v1.0	Vigna umbellata
anvumR0777	Vigna umbellata FF25 genome v1.0	Vigna umbellata
anvvaR0713	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
anvvaR0721	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
anvvaR0723	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
anvstR0744	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
anvasR0755	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
anvstR0761	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
anvasR0770	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
anvunR0632	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
anpvfR0787	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
anpvfR0811	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Orthologs


Gene/Transcript	Assembly	Species
Vigst.11G045100.01	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
rna-XM_004489494.3	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
Psat01G0211800-T1	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
LR48_mrnaVigan10g205500	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
XM_058920342.1	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
Cr_14812.1	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
rna-XM_014656910.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
Vigun04g088900.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
Phvul.004G060000.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Vigun04g088900.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
Cc_v2.0_20767.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
Vfaba.Tiffany.R1.1g091800.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba
Ca_04681.1	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
Ca_14698	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
PvulFLAVERTChr04.1000352	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
Cc_v2.0_15816.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
Vum_11G00611.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
jg45987.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
evm.model.Chr04.785.2.6211316c	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
Va10G049470.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
Vigan.11G088500.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
Vfaba.Hedin2.R1.1g122480.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
rna-TanjilR_13646	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
rna-TanjilR_05199	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
rna-TanjilR_06025	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-TanjilG_01595	gene-TanjilG_01595_La_Tanjil_v1.0	Lupinus angustifolius	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
rna-TanjilR_01595	rna-TanjilR_01595_La_Tanjil_v1.0-protein	Lupinus angustifolius	polypeptide
rna-TanjilR_01595_La_Tanjil_v1.0	rna-TanjilR_01595_La_Tanjil_v1.0	Lupinus angustifolius	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
rna-TanjilR_01595_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20595607..20596068	rna-TanjilR_01595_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20595607..20596068	Lupinus angustifolius	exon
rna-TanjilR_01595_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20596208..20596673	rna-TanjilR_01595_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20596208..20596673	Lupinus angustifolius	exon
rna-TanjilR_01595_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20598104..20598570	rna-TanjilR_01595_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20598104..20598570	Lupinus angustifolius	exon
rna-TanjilR_01595_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20598710..20599591	rna-TanjilR_01595_La_Tanjil_v1.0-exon-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20598710..20599591	Lupinus angustifolius	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
rna-TanjilR_01595_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20595607..20596068	rna-TanjilR_01595_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20595607..20596068	Lupinus angustifolius	CDS
rna-TanjilR_01595_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20596208..20596673	rna-TanjilR_01595_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20596208..20596673	Lupinus angustifolius	CDS
rna-TanjilR_01595_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20598104..20598570	rna-TanjilR_01595_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20598104..20598570	Lupinus angustifolius	CDS
rna-TanjilR_01595_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20598710..20599591	rna-TanjilR_01595_La_Tanjil_v1.0-CDS-Chr_LG20-CM007380.1_La_Tanjil_v1.0-1579734366:20598710..20599591	Lupinus angustifolius	CDS

Homology

[Close]

BLAST of rna-TanjilR_01595 vs. DB:Swiss
Match: EF1A_ORYSJ (Elongation factor 1-alpha OS=Oryza sativa subsp. japonica OX=39947 GN=REFA1 PE=2 SV=2)

HSP 1 Score: 570.081 bits (1468), Expect = 0.000e+0
Identity = 275/290 (94.83%), Postives = 284/290 (97.93%), Query Frame = 2

Query: 3080 LCYNILFQMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 3949
             C N   +MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTFGP+GLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG+VASNSKDDPAKEAA+FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF EL+TKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIK+VEKKDPTG
Sbjct:  150 CCCN---KMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTG 436

HSP 2 Score: 323.939 bits (829), Expect = 0.000e+0
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 1

Query: 2503 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKV 2967
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNK+
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155

HSP 3 Score: 323.939 bits (829), Expect = 4.211e-177
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 1

Query:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKV 465
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNK+
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155

HSP 4 Score: 322.783 bits (826), Expect = 4.211e-177
Identity = 155/166 (93.37%), Postives = 161/166 (96.99%), Query Frame = 2

Query:  578 LCYNILFQMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGF 1075
             C N   +MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTFGP+GLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG+
Sbjct:  150 CCCN---KMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGY 312

[Close]

BLAST of rna-TanjilR_01595 vs. DB:Swiss
Match: EF1A_MANES (Elongation factor 1-alpha OS=Manihot esculenta OX=3983 GN=EF1 PE=3 SV=1)

HSP 1 Score: 565.074 bits (1455), Expect = 0.000e+0
Identity = 273/290 (94.14%), Postives = 280/290 (96.55%), Query Frame = 2

Query: 3080 LCYNILFQMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 3949
             C N   +MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQI EPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGM+VTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG VASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF E+LTKIDRRSGKELEKEPKFLKNGDAG VKMIPTKPMVVETFS YPPLGRFAVRDMRQTVAVGVIKSVEKKDP+G
Sbjct:  150 CCCN---KMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGIVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSG 436

HSP 2 Score: 325.094 bits (832), Expect = 0.000e+0
Identity = 154/155 (99.35%), Postives = 155/155 (100.00%), Query Frame = 1

Query: 2503 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKV 2967
            MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNK+
Sbjct:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155

HSP 3 Score: 325.094 bits (832), Expect = 9.842e-177
Identity = 154/155 (99.35%), Postives = 155/155 (100.00%), Query Frame = 1

Query:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKV 465
            MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNK+
Sbjct:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155

HSP 4 Score: 320.472 bits (820), Expect = 9.842e-177
Identity = 154/166 (92.77%), Postives = 159/166 (95.78%), Query Frame = 2

Query:  578 LCYNILFQMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGF 1075
             C N   +MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQI EPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGM+VTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG 
Sbjct:  150 CCCN---KMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGI 312

[Close]

BLAST of rna-TanjilR_01595 vs. DB:Swiss
Match: EF1A_SOLLC (Elongation factor 1-alpha OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 564.303 bits (1453), Expect = 0.000e+0
Identity = 271/290 (93.45%), Postives = 283/290 (97.59%), Query Frame = 2

Query: 3080 LCYNILFQMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 3949
             C N   +MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG+VASNSKDDPAK AA+FT+QVIIMNHPGQIGNGYAPVLDCHTSHIAVKF E+LTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETF+EYPPLGRFAVRDMRQTVAVGV+K+V+KKDPTG
Sbjct:  150 CCCN---KMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAASFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVAVGVVKNVDKKDPTG 436

HSP 2 Score: 322.013 bits (824), Expect = 0.000e+0
Identity = 152/155 (98.06%), Postives = 155/155 (100.00%), Query Frame = 1

Query: 2503 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKV 2967
            MGKEK+HI+IVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNK+
Sbjct:    1 MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155

HSP 3 Score: 324.324 bits (830), Expect = 4.974e-177
Identity = 156/166 (93.98%), Postives = 161/166 (96.99%), Query Frame = 2

Query:  578 LCYNILFQMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGF 1075
             C N   +MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG+
Sbjct:  150 CCCN---KMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGY 312

HSP 4 Score: 322.013 bits (824), Expect = 4.974e-177
Identity = 152/155 (98.06%), Postives = 155/155 (100.00%), Query Frame = 1

Query:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKV 465
            MGKEK+HI+IVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNK+
Sbjct:    1 MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155

[Close]

BLAST of rna-TanjilR_01595 vs. DB:Swiss
Match: EF1A_TOBAC (Elongation factor 1-alpha OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 563.148 bits (1450), Expect = 0.000e+0
Identity = 272/290 (93.79%), Postives = 282/290 (97.24%), Query Frame = 2

Query: 3080 LCYNILFQMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 3949
             C N   +MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQIN+ KRP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAK AA+FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF E+LTKIDRRSGKE+EKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIK+V+KKDPTG
Sbjct:  150 CCCN---KMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINDAKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKGAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVDKKDPTG 436

HSP 2 Score: 323.168 bits (827), Expect = 0.000e+0
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 1

Query: 2503 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKV 2967
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNK+
Sbjct:    1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155

HSP 3 Score: 323.168 bits (827), Expect = 2.152e-176
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 1

Query:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKV 465
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNK+
Sbjct:    1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155

HSP 4 Score: 321.242 bits (822), Expect = 2.152e-176
Identity = 155/166 (93.37%), Postives = 160/166 (96.39%), Query Frame = 2

Query:  578 LCYNILFQMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGF 1075
             C N   +MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQIN+ KRP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGF
Sbjct:  150 CCCN---KMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINDAKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGF 312

[Close]

BLAST of rna-TanjilR_01595 vs. DB:Swiss
Match: EF1A_MAIZE (Elongation factor 1-alpha OS=Zea mays OX=4577 GN=EF1A PE=3 SV=1)

HSP 1 Score: 561.607 bits (1446), Expect = 0.000e+0
Identity = 272/290 (93.79%), Postives = 281/290 (96.90%), Query Frame = 2

Query: 3080 LCYNILFQMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 3949
             C N   +MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKI FVPISGFEGDNMIERSTNLDWYKGPTLLEALD INEPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG+VAS SKDDPAKEAA+FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF EL+TKIDRRSGKELEKEPKFLKNGDAGMVKM+PTKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG
Sbjct:  150 CCCN---KMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIHFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASGSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMVPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 436

HSP 2 Score: 323.168 bits (827), Expect = 0.000e+0
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 1

Query: 2503 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKV 2967
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNK+
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155

HSP 3 Score: 323.168 bits (827), Expect = 1.561e-175
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 1

Query:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKV 465
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNK+
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155

HSP 4 Score: 318.161 bits (814), Expect = 1.561e-175
Identity = 154/166 (92.77%), Postives = 159/166 (95.78%), Query Frame = 2

Query:  578 LCYNILFQMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGF 1075
             C N   +MDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKI FVPISGFEGDNMIERSTNLDWYKGPTLLEALD INEPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG+
Sbjct:  150 CCCN---KMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIHFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGY 312

[Close]

BLAST of rna-TanjilR_01595 vs. DB:Swiss
Match: EF1A_VICFA (Elongation factor 1-alpha OS=Vicia faba OX=3906 PE=2 SV=1)

HSP 1 Score: 561.222 bits (1445), Expect = 0.000e+0
Identity = 272/290 (93.79%), Postives = 279/290 (96.21%), Query Frame = 2

Query: 3080 LCYNILFQMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 3949
             C N   +MDATTPKYSK RY+EIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLL+ALD INEPKRP+DKPLRLPLQDVYKIGGIG VPVGRVETGVVKPGMLVTF PTGLTTEVKSVEMHHEAL EALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF EL+TKIDRRSGKE+EKEPKFLKNGDAGMVKMIPTKPMVVETF+EYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG
Sbjct:  150 CCCN---KMDATTPKYSKGRYEEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGIVPVGRVETGVVKPGMLVTFAPTGLTTEVKSVEMHHEALTEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELITKIDRRSGKEIEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 436

HSP 2 Score: 323.939 bits (829), Expect = 0.000e+0
Identity = 153/155 (98.71%), Postives = 155/155 (100.00%), Query Frame = 1

Query: 2503 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKV 2967
            MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFET+KYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNK+
Sbjct:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETSKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155

HSP 3 Score: 323.939 bits (829), Expect = 2.516e-174
Identity = 153/155 (98.71%), Postives = 155/155 (100.00%), Query Frame = 1

Query:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKV 465
            MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFET+KYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNK+
Sbjct:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETSKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155

HSP 4 Score: 313.153 bits (801), Expect = 2.516e-174
Identity = 152/166 (91.57%), Postives = 156/166 (93.98%), Query Frame = 2

Query:  578 LCYNILFQMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGF 1075
             C N   +MDATTPKYSK RY+EIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLL+ALD INEPKRP+DKPLRLPLQDVYKIGGIG VPVGRVETGVVKPGMLVTF PTGLTTEVKSVEMHHEAL EALPGDNVGFNVKNVAVKDLKRGF
Sbjct:  150 CCCN---KMDATTPKYSKGRYEEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGIVPVGRVETGVVKPGMLVTFAPTGLTTEVKSVEMHHEALTEALPGDNVGFNVKNVAVKDLKRGF 312

[Close]

BLAST of rna-TanjilR_01595 vs. DB:Swiss
Match: EF1A4_ARATH (Elongation factor 1-alpha 4 OS=Arabidopsis thaliana OX=3702 GN=A4 PE=1 SV=2)

HSP 1 Score: 560.066 bits (1442), Expect = 0.000e+0
Identity = 269/290 (92.76%), Postives = 280/290 (96.55%), Query Frame = 2

Query: 3080 LCYNILFQMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 3949
             C N   +MDATTPKYSKARYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGM+VTF PTGLTTEVKSVEMHHE+L EALPGDNVGFNVKNVAVKDLKRG+VASNSKDDPAK AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF E+LTKIDRRSGKE+EKEPKFLKNGDAGMVKM PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV+KKDPTG
Sbjct:  150 CCCN---KMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTG 436

HSP 2 Score: 323.168 bits (827), Expect = 0.000e+0
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 1

Query: 2503 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKV 2967
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNK+
Sbjct:    1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155

HSP 3 Score: 323.168 bits (827), Expect = 3.618e-175
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 1

Query:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKV 465
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNK+
Sbjct:    1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155

HSP 4 Score: 316.62 bits (810), Expect = 3.618e-175
Identity = 151/166 (90.96%), Postives = 159/166 (95.78%), Query Frame = 2

Query:  578 LCYNILFQMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGF 1075
             C N   +MDATTPKYSKARYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGM+VTF PTGLTTEVKSVEMHHE+L EALPGDNVGFNVKNVAVKDLKRG+
Sbjct:  150 CCCN---KMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGY 312

[Close]

BLAST of rna-TanjilR_01595 vs. DB:Swiss
Match: EF1A3_ARATH (Elongation factor 1-alpha 3 OS=Arabidopsis thaliana OX=3702 GN=A3 PE=1 SV=2)

HSP 1 Score: 560.066 bits (1442), Expect = 0.000e+0
Identity = 269/290 (92.76%), Postives = 280/290 (96.55%), Query Frame = 2

Query: 3080 LCYNILFQMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 3949
             C N   +MDATTPKYSKARYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGM+VTF PTGLTTEVKSVEMHHE+L EALPGDNVGFNVKNVAVKDLKRG+VASNSKDDPAK AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF E+LTKIDRRSGKE+EKEPKFLKNGDAGMVKM PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV+KKDPTG
Sbjct:  150 CCCN---KMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTG 436

HSP 2 Score: 323.168 bits (827), Expect = 0.000e+0
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 1

Query: 2503 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKV 2967
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNK+
Sbjct:    1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155

HSP 3 Score: 323.168 bits (827), Expect = 3.618e-175
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 1

Query:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKV 465
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNK+
Sbjct:    1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155

HSP 4 Score: 316.62 bits (810), Expect = 3.618e-175
Identity = 151/166 (90.96%), Postives = 159/166 (95.78%), Query Frame = 2

Query:  578 LCYNILFQMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGF 1075
             C N   +MDATTPKYSKARYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGM+VTF PTGLTTEVKSVEMHHE+L EALPGDNVGFNVKNVAVKDLKRG+
Sbjct:  150 CCCN---KMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGY 312

[Close]

BLAST of rna-TanjilR_01595 vs. DB:Swiss
Match: EF1A2_ARATH (Elongation factor 1-alpha 2 OS=Arabidopsis thaliana OX=3702 GN=A2 PE=1 SV=2)

HSP 1 Score: 560.066 bits (1442), Expect = 0.000e+0
Identity = 269/290 (92.76%), Postives = 280/290 (96.55%), Query Frame = 2

Query: 3080 LCYNILFQMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 3949
             C N   +MDATTPKYSKARYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGM+VTF PTGLTTEVKSVEMHHE+L EALPGDNVGFNVKNVAVKDLKRG+VASNSKDDPAK AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF E+LTKIDRRSGKE+EKEPKFLKNGDAGMVKM PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV+KKDPTG
Sbjct:  150 CCCN---KMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTG 436

HSP 2 Score: 323.168 bits (827), Expect = 0.000e+0
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 1

Query: 2503 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKV 2967
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNK+
Sbjct:    1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155

HSP 3 Score: 323.168 bits (827), Expect = 3.618e-175
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 1

Query:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKV 465
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNK+
Sbjct:    1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155

HSP 4 Score: 316.62 bits (810), Expect = 3.618e-175
Identity = 151/166 (90.96%), Postives = 159/166 (95.78%), Query Frame = 2

Query:  578 LCYNILFQMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGF 1075
             C N   +MDATTPKYSKARYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGM+VTF PTGLTTEVKSVEMHHE+L EALPGDNVGFNVKNVAVKDLKRG+
Sbjct:  150 CCCN---KMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGY 312

[Close]

BLAST of rna-TanjilR_01595 vs. DB:Swiss
Match: EF1A1_ARATH (Elongation factor 1-alpha 1 OS=Arabidopsis thaliana OX=3702 GN=A1 PE=1 SV=1)

HSP 1 Score: 560.066 bits (1442), Expect = 0.000e+0
Identity = 269/290 (92.76%), Postives = 280/290 (96.55%), Query Frame = 2

Query: 3080 LCYNILFQMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 3949
             C N   +MDATTPKYSKARYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGM+VTF PTGLTTEVKSVEMHHE+L EALPGDNVGFNVKNVAVKDLKRG+VASNSKDDPAK AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF E+LTKIDRRSGKE+EKEPKFLKNGDAGMVKM PTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV+KKDPTG
Sbjct:  150 CCCN---KMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPTG 436

HSP 2 Score: 323.168 bits (827), Expect = 0.000e+0
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 1

Query: 2503 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKV 2967
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNK+
Sbjct:    1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155

HSP 3 Score: 323.168 bits (827), Expect = 3.618e-175
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 1

Query:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKV 465
            MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNK+
Sbjct:    1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155

HSP 4 Score: 316.62 bits (810), Expect = 3.618e-175
Identity = 151/166 (90.96%), Postives = 159/166 (95.78%), Query Frame = 2

Query:  578 LCYNILFQMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGF 1075
             C N   +MDATTPKYSKARYDEI+KEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGM+VTF PTGLTTEVKSVEMHHE+L EALPGDNVGFNVKNVAVKDLKRG+
Sbjct:  150 CCCN---KMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGY 312

The following BLAST results are available for this feature:

BLAST of rna-TanjilR_01595 vs. DB:Swiss

BLAST of rna-TanjilR_01595 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 10

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
EF1A_ORYSJ	4.211e-177	94.83	Elongation factor 1-alpha OS=Oryza sativa subsp. j...	[more]
EF1A_MANES	9.842e-177	94.14	Elongation factor 1-alpha OS=Manihot esculenta OX=...	[more]
EF1A_SOLLC	4.974e-177	93.45	Elongation factor 1-alpha OS=Solanum lycopersicum ...	[more]
EF1A_TOBAC	2.152e-176	93.79	Elongation factor 1-alpha OS=Nicotiana tabacum OX=...	[more]
EF1A_MAIZE	1.561e-175	93.79	Elongation factor 1-alpha OS=Zea mays OX=4577 GN=E...	[more]
EF1A_VICFA	2.516e-174	93.79	Elongation factor 1-alpha OS=Vicia faba OX=3906 PE...	[more]
EF1A4_ARATH	3.618e-175	92.76	Elongation factor 1-alpha 4 OS=Arabidopsis thalian...	[more]
EF1A3_ARATH	3.618e-175	92.76	Elongation factor 1-alpha 3 OS=Arabidopsis thalian...	[more]
EF1A2_ARATH	3.618e-175	92.76	Elongation factor 1-alpha 2 OS=Arabidopsis thalian...	[more]
EF1A1_ARATH	3.618e-175	92.76	Elongation factor 1-alpha 1 OS=Arabidopsis thalian...	[more]

InterPro

Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000795	Transcription factor, GTP-binding domain	PRINTS	PR00315	ELONGATNFCT	coord: 68..76 score: 77.92 coord: 9..22 score: 74.83 coord: 104..115 score: 60.8 coord: 88..98 score: 70.19 coord: 148..157 score: 47.47
IPR000795	Transcription factor, GTP-binding domain	PFAM	PF00009	GTP_EFTU	coord: 6..222 e-value: 3.7E-53 score: 179.9 coord: 317..533 e-value: 3.7E-53 score: 179.9
IPR000795	Transcription factor, GTP-binding domain	PROSITE	PS51722	G_TR_2	coord: 5..230 score: 60.138
IPR000795	Transcription factor, GTP-binding domain	PROSITE	PS51722	G_TR_2	coord: 316..541 score: 60.138
None	No IPR available	GENE3D	2.40.30.10		coord: 539..631 e-value: 2.2E-41 score: 141.8 coord: 229..314 e-value: 2.3E-37 score: 128.9
None	No IPR available	GENE3D	2.40.30.10		coord: 634..741 e-value: 7.4E-49 score: 166.5
None	No IPR available	GENE3D	3.40.50.300		coord: 1..228 e-value: 4.8E-89 score: 299.9
None	No IPR available	GENE3D	3.40.50.300		coord: 315..537 e-value: 1.3E-87 score: 295.0
None	No IPR available	CDD	cd03705	EF1_alpha_III	coord: 634..737 e-value: 2.3041E-65 score: 210.127
None	No IPR available	CDD	cd01883	EF1_alpha	coord: 320..538 e-value: 5.64284E-153 score: 441.93
None	No IPR available	CDD	cd03693	EF1_alpha_II	coord: 541..631 e-value: 1.80966E-56 score: 185.469
None	No IPR available	CDD	cd03693	EF1_alpha_II	coord: 230..316 e-value: 1.04656E-50 score: 169.676
None	No IPR available	CDD	cd01883	EF1_alpha	coord: 9..227 e-value: 5.64284E-153 score: 441.93
IPR004539	Translation elongation factor EF1A, eukaryotic/archaeal	TIGRFAM	TIGR00483	TIGR00483	coord: 312..744 e-value: 4.0E-214 score: 708.8
IPR004539	Translation elongation factor EF1A, eukaryotic/archaeal	HAMAP	MF_00118_A	EF_Tu_A	coord: 313..743 score: 51.371
IPR004161	Translation elongation factor EFTu-like, domain 2	PFAM	PF03144	GTP_EFTU_D2	coord: 248..307 e-value: 2.7E-12 score: 46.9 coord: 559..624 e-value: 5.2E-14 score: 52.4
IPR004160	Translation elongation factor EFTu/EF1A, C-terminal	PFAM	PF03143	GTP_EFTU_D3	coord: 633..740 e-value: 1.4E-38 score: 131.7
IPR031157	Tr-type G domain, conserved site	PROSITE	PS00301	G_TR_1	coord: 372..387
IPR031157	Tr-type G domain, conserved site	PROSITE	PS00301	G_TR_1	coord: 61..76
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 314..560
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 3..249
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 542..632
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 231..309
IPR009001	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	SUPERFAMILY	50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	coord: 637..740

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr_LG20-CM007380.1:20595607..20599591+
coding sequence from alignment at Chr_LG20-CM007380.1:20595607..20599591+

mRNA sequence

>rna-TanjilR_01595_La_Tanjil_v1.0 ID=rna-TanjilR_01595_La_Tanjil_v1.0; Name=rna-TanjilR_01595; organism=Lupinus angustifolius; type=mRNA; length=3985bp
ATGGGAAAAGAGAAGGTTCACATTAACATTGTCGTCATTGGACATGTCGA
TTCTGGGAAATCAACCACCACTGGCCACTTGATCTACAAGCTTGGAGGTA
TTGACAAGCGTGTGATTGAGAGGTTTGAGAAAGAGGCTGCTGAGATGAAC
AAGAGGTCATTCAAGTATGCCTGGGTGCTTGACAAGCTCAAGGCTGAGCG
TGAAAGAGGAATTACAATTGATATTGCTTTGTGGAAGTTTGAGACCACCA
AGTACTACTGCACAGTCATTGATGCACCCGGACATCGTGATTTCATCAAA
AACATGATTACTGGAACATCACAGGCTGACTGTGCTGTCCTTATTATTGA
TTCCACCACTGGTGGTTTTGAAGCTGGTATTTCCAAGGATGGACAGACCC
GTGAGCATGCTCTGCTTGCTTTCACTCTTGGAGTCAAGCAAATGATCTGT
TGTTGTAACAAGGTATATAAATCTAGGGTGTATTAATTATTTCTATAGAC
AAATTGTATATTTTGACTAATTTTAACATTTGCTatgagttattattttt
attaaatccaCATGCAGatttattgatttatgttataatattttgtttca
gaTGGATGCCACTACACCCAAGTACTCTAAGGCTAGGTATGATGAAATCG
TGAAGGAAGTTTCTTCTTACCTGAAGAAGGTTGGTTACAACCCAGACAAA
ATTCCTTTTGTGCCCATCTCTGGTTTCGAGGGAGACAACATGATTGAGAG
GTCCACCAACCTTGACTGGTACAAGGGACCAACTCTACTTGAGGCTCTTG
ACCAGATCAATGAGCCCAAGAGACCCACAGACAAGCCTCTCAGGCTTCCA
TTGCAGGATGTCTACAAGATTGGTGGTATTGGAACTGTGCCAGTGGGACG
TGTTGAGACTGGTGTTGTGAAGCCTGGTATGCTTGTGACTTTTGGTCCCA
CTGGACTGACAACTGAAGTTAAGTCTGTGGAGATGCACCACGAGGCTCTC
CAAGAAGCTCTTCCAGGAGACAATGTTGGATTCAATGTGAAGAATGTTGC
AGTCAAGGATCTCAAGCGTGGTTTCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNcatgttttgtttaacttaattgcat
ttatcacattttttgtttaaaagattacacttatttcttatgcaggggtg
atcaatgtaatgaaagttaaaaaatatgggaggtttgtgtaggtgtagaa
aagtgaggggtggtttgtgtaatttcactaaaattcagggggtgagtgta
atttactcttgaaTAATGAAAGGaattgaaaagtaaataacattattttt
aattgatggTTTTTTTGTATGATATTAGATATCTatccaaataaatatat
tcattagatataataaatgaatttagaTGTAtccattattataattatac
attaaatataattgacaatttaattttttttgaatttgaatgaattatga
ataatttggTAACTAACTTTTATGTATGATATATATCCTCTTCCTTCTAG
TGGAGTGGGACACAACCTCCATTTAAATTTAAAAGCCTTAAGCGATAAGC
AAAGTTGGGGTATATTAGGAACTTTAACTAAAAACCAAGGGTATTTACGG
AATAACAAAAAGCAGCAACTTCATATAAATATCACTGAACCCTAAAATTT
TCATTCCACTCTGCTTCTATTATCTCAGTCCCTATTTCGCGGCTGAGAAT
TCTGAAACACCAAGCATTCTTCTTTAGGTATAATTTCTTCGATCATCTTC
TCTCTTAATTTCGATCGATGTCTCTTGTTTTCTTTTGATACTTGCTTATC
TTTTTTTTGCGTTATCGAGTTCCATGTTTTGAATCGTTGAGTTTATTCGA
TCgatgttttgaatgtttttatgattaattttgtGTTTATGTGCTTGATT
AATTTTGACGTATTCTCAGATCTTATGTTTTGGATTAAAAGTAGGATCAC
TTTGTGGATGTATCTGTTTGTGATGTTTTCAATGTTTGATTATGGATCTG
TGTTGTTATAATCGGTACTGTTTGTTCGATTTAgattttttaatgataat
tttgaaattctctTGTTCACTTTAAAAAATTTCTGCGTTGTGCTGATTTT
ATGTTACcaatgattatatgatttgttGGGTTAGttttatatgatattat
tttaagtttgcTTTATACTATGTGAATAGtatttgtttcaaaaaatttct
tttcattctttcttttgcTTCAATGATTGTATGTCCCTACGTTAAGATGG
AATATCTTTTGCTGTTATAGATTTGATTTGTCTGCTTGATAAcctaaatt
tgtttgttttcattgttgttgaAAGCTGTATATATGATTATTCTATTGTT
TAATTTGAGTTCTTACCTGCTGATCTTTGTCTTCATTTCAGCTTAAGACA
TCATGGGAAAAGAGAAGGTTCACATTAACATTGTCGTCATTGGACATGTC
GATTCTGGGAAATCAACCACCACTGGCCACTTGATCTACAAGCTTGGAGG
TATTGACAAGCGTGTGATTGAGAGGTTTGAGAAAGAGGCTGCTGAGATGA
ACAAGAGGTCATTCAAGTATGCCTGGGTGCTTGACAAGCTCAAGGCTGAG
CGTGAAAGAGGAATTACAATTGATATTGCTTTGTGGAAGTTTGAGACCAC
CAAGTACTACTGCACAGTCATTGATGCACCCGGACATCGTGATTTCATCA
AAAACATGATTACTGGAACATCACAGGCTGACTGTGCTGTCCTTATTATT
GATTCCACCACTGGTGGTTTTGAAGCTGGTATTTCCAAGGATGGACAGAC
CCGTGAGCATGCTCTGCTTGCTTTCACTCTTGGAGTCAAGCAAATGATCT
GTTGTTGTAACAAGGTATATAAATCTAGGGTGTATTAATTATTTCTATAG
ACAAATTGTATATTTTGACTAATTTTAACATTTGCTatgagttattattt
ttattaaatccaCATGCAGatttattgatttatgttataatattttgttt
cagaTGGATGCCACTACACCCAAGTACTCTAAGGCTAGGTATGATGAAAT
CGTGAAGGAAGTTTCTTCTTACCTGAAGAAGGTTGGTTACAACCCAGACA
AAATTCCTTTTGTGCCCATCTCTGGTTTCGAGGGAGACAACATGATTGAG
AGGTCCACCAACCTTGACTGGTACAAGGGACCAACTCTACTTGAGGCTCT
TGACCAGATCAATGAGCCCAAGAGACCCACAGACAAGCCTCTCAGGCTTC
CATTGCAGGATGTCTACAAGATTGGTGGTATTGGAACTGTGCCAGTGGGA
CGTGTTGAGACTGGTGTTGTGAAGCCTGGTATGCTTGTGACTTTTGGTCC
CACTGGACTGACAACTGAAGTTAAGTCTGTGGAGATGCACCACGAGGCTC
TCCAAGAAGCTCTTCCAGGAGACAATGTTGGATTCAATGTTAAGAATGTT
GCAGTCAAGGATCTCAAGCGTGGTTTCGTTGCCTCAAACTCTAAGGATGA
CCCTGCCAAGGAAGCTGCTAACTTCACATCCCAAGTCATTATCATGAACC
ATCCTGGCCAGATTGGAAATGGATATGCACCTGTGCTTGATTGTCACACT
TCTCATATTGCCGTTAAGTTTGGTGAACTCTTGACCAAGATAGACAGGCG
ATCTGGTAAGGAGCTTGAGAAGGAGCCCAAATTTTTGAAGAATGGTGATG
CTGGTATGGTTAAGATGATTCCCACCAAGCCCATGGTTGTTGAGACTTTC
TCCGAGTATCCTCCTCTTGGTCGTTTTGCCGTGAGGGACATGCGTCAAAC
TGTGGCTGTTGGAGTCATCAAGAGTGTGGAGAAGAAGGACCCCACTGGTG
CCAAGGTCACCAAGGCTGCAGCAAAGAAGAAATAA

protein sequence of rna-TanjilR_01595_La_Tanjil_v1.0

>rna-TanjilR_01595_La_Tanjil_v1.0 ID=rna-TanjilR_01595_La_Tanjil_v1.0; Name=rna-TanjilR_01595_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=758bp
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMN
KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIK
NMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMIC
CCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDN
MIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTV
PVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKHIMGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVI
ERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTV
IDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALL
AFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIP
FVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQ
DVYKIGGIGTVPVGRVETGVVKPGMLVTFGPTGLTTEVKSVEMHHEALQE
ALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPG
QIGNGYAPVLDCHTSHIAVKFGELLTKIDRRSGKELEKEPKFLKNGDAGM
VKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTGAKV
TKAAAKKK

mRNA from alignment at Chr_LG20-CM007380.1:20595607..20599591+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>rna-TanjilR_01595_La_Tanjil_v1.0 ID=rna-TanjilR_01595_La_Tanjil_v1.0; Name=rna-TanjilR_01595; organism=Lupinus angustifolius; type=mRNA; length=3985bp; location=Sequence derived from: Chr_LG20-CM007380.1:20595607..20599591+ (Lupinus angustifolius
ATGGGAAAAGAGAAGGTTCACATTAACATTGTCGTCATTGGACATGTCGA
TTCTGGGAAATCAACCACCACTGGCCACTTGATCTACAAGCTTGGAGGTA
TTGACAAGCGTGTGATTGAGAGGTTTGAGAAAGAGGCTGCTGAGATGAAC
AAGAGGTCATTCAAGTATGCCTGGGTGCTTGACAAGCTCAAGGCTGAGCG
TGAAAGAGGAATTACAATTGATATTGCTTTGTGGAAGTTTGAGACCACCA
AGTACTACTGCACAGTCATTGATGCACCCGGACATCGTGATTTCATCAAA
AACATGATTACTGGAACATCACAGGCTGACTGTGCTGTCCTTATTATTGA
TTCCACCACTGGTGGTTTTGAAGCTGGTATTTCCAAGGATGGACAGACCC
GTGAGCATGCTCTGCTTGCTTTCACTCTTGGAGTCAAGCAAATGATCTGT
TGTTGTAACAAGGTATATAAATCTAGGGTGTATTAATTATTTCTATAGAC
AAATTGTATATTTTGACTAATTTTAACATTTGCTatgagttattattttt
attaaatccaCATGCAGatttattgatttatgttataatattttgtttca
gaTGGATGCCACTACACCCAAGTACTCTAAGGCTAGGTATGATGAAATCG
TGAAGGAAGTTTCTTCTTACCTGAAGAAGGTTGGTTACAACCCAGACAAA
ATTCCTTTTGTGCCCATCTCTGGTTTCGAGGGAGACAACATGATTGAGAG
GTCCACCAACCTTGACTGGTACAAGGGACCAACTCTACTTGAGGCTCTTG
ACCAGATCAATGAGCCCAAGAGACCCACAGACAAGCCTCTCAGGCTTCCA
TTGCAGGATGTCTACAAGATTGGTGGTATTGGAACTGTGCCAGTGGGACG
TGTTGAGACTGGTGTTGTGAAGCCTGGTATGCTTGTGACTTTTGGTCCCA
CTGGACTGACAACTGAAGTTAAGTCTGTGGAGATGCACCACGAGGCTCTC
CAAGAAGCTCTTCCAGGAGACAATGTTGGATTCAATGTGAAGAATGTTGC
AGTCAAGGATCTCAAGCGTGGTTTCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNcatgttttgtttaacttaattgcat
ttatcacattttttgtttaaaagattacacttatttcttatgcaggggtg
atcaatgtaatgaaagttaaaaaatatgggaggtttgtgtaggtgtagaa
aagtgaggggtggtttgtgtaatttcactaaaattcagggggtgagtgta
atttactcttgaaTAATGAAAGGaattgaaaagtaaataacattattttt
aattgatggTTTTTTTGTATGATATTAGATATCTatccaaataaatatat
tcattagatataataaatgaatttagaTGTAtccattattataattatac
attaaatataattgacaatttaattttttttgaatttgaatgaattatga
ataatttggTAACTAACTTTTATGTATGATATATATCCTCTTCCTTCTAG
TGGAGTGGGACACAACCTCCATTTAAATTTAAAAGCCTTAAGCGATAAGC
AAAGTTGGGGTATATTAGGAACTTTAACTAAAAACCAAGGGTATTTACGG
AATAACAAAAAGCAGCAACTTCATATAAATATCACTGAACCCTAAAATTT
TCATTCCACTCTGCTTCTATTATCTCAGTCCCTATTTCGCGGCTGAGAAT
TCTGAAACACCAAGCATTCTTCTTTAGGTATAATTTCTTCGATCATCTTC
TCTCTTAATTTCGATCGATGTCTCTTGTTTTCTTTTGATACTTGCTTATC
TTTTTTTTGCGTTATCGAGTTCCATGTTTTGAATCGTTGAGTTTATTCGA
TCgatgttttgaatgtttttatgattaattttgtGTTTATGTGCTTGATT
AATTTTGACGTATTCTCAGATCTTATGTTTTGGATTAAAAGTAGGATCAC
TTTGTGGATGTATCTGTTTGTGATGTTTTCAATGTTTGATTATGGATCTG
TGTTGTTATAATCGGTACTGTTTGTTCGATTTAgattttttaatgataat
tttgaaattctctTGTTCACTTTAAAAAATTTCTGCGTTGTGCTGATTTT
ATGTTACcaatgattatatgatttgttGGGTTAGttttatatgatattat
tttaagtttgcTTTATACTATGTGAATAGtatttgtttcaaaaaatttct
tttcattctttcttttgcTTCAATGATTGTATGTCCCTACGTTAAGATGG
AATATCTTTTGCTGTTATAGATTTGATTTGTCTGCTTGATAAcctaaatt
tgtttgttttcattgttgttgaAAGCTGTATATATGATTATTCTATTGTT
TAATTTGAGTTCTTACCTGCTGATCTTTGTCTTCATTTCAGCTTAAGACA
TCATGGGAAAAGAGAAGGTTCACATTAACATTGTCGTCATTGGACATGTC
GATTCTGGGAAATCAACCACCACTGGCCACTTGATCTACAAGCTTGGAGG
TATTGACAAGCGTGTGATTGAGAGGTTTGAGAAAGAGGCTGCTGAGATGA
ACAAGAGGTCATTCAAGTATGCCTGGGTGCTTGACAAGCTCAAGGCTGAG
CGTGAAAGAGGAATTACAATTGATATTGCTTTGTGGAAGTTTGAGACCAC
CAAGTACTACTGCACAGTCATTGATGCACCCGGACATCGTGATTTCATCA
AAAACATGATTACTGGAACATCACAGGCTGACTGTGCTGTCCTTATTATT
GATTCCACCACTGGTGGTTTTGAAGCTGGTATTTCCAAGGATGGACAGAC
CCGTGAGCATGCTCTGCTTGCTTTCACTCTTGGAGTCAAGCAAATGATCT
GTTGTTGTAACAAGGTATATAAATCTAGGGTGTATTAATTATTTCTATAG
ACAAATTGTATATTTTGACTAATTTTAACATTTGCTatgagttattattt
ttattaaatccaCATGCAGatttattgatttatgttataatattttgttt
cagaTGGATGCCACTACACCCAAGTACTCTAAGGCTAGGTATGATGAAAT
CGTGAAGGAAGTTTCTTCTTACCTGAAGAAGGTTGGTTACAACCCAGACA
AAATTCCTTTTGTGCCCATCTCTGGTTTCGAGGGAGACAACATGATTGAG
AGGTCCACCAACCTTGACTGGTACAAGGGACCAACTCTACTTGAGGCTCT
TGACCAGATCAATGAGCCCAAGAGACCCACAGACAAGCCTCTCAGGCTTC
CATTGCAGGATGTCTACAAGATTGGTGGTATTGGAACTGTGCCAGTGGGA
CGTGTTGAGACTGGTGTTGTGAAGCCTGGTATGCTTGTGACTTTTGGTCC
CACTGGACTGACAACTGAAGTTAAGTCTGTGGAGATGCACCACGAGGCTC
TCCAAGAAGCTCTTCCAGGAGACAATGTTGGATTCAATGTTAAGAATGTT
GCAGTCAAGGATCTCAAGCGTGGTTTCGTTGCCTCAAACTCTAAGGATGA
CCCTGCCAAGGAAGCTGCTAACTTCACATCCCAAGTCATTATCATGAACC
ATCCTGGCCAGATTGGAAATGGATATGCACCTGTGCTTGATTGTCACACT
TCTCATATTGCCGTTAAGTTTGGTGAACTCTTGACCAAGATAGACAGGCG
ATCTGGTAAGGAGCTTGAGAAGGAGCCCAAATTTTTGAAGAATGGTGATG
CTGGTATGGTTAAGATGATTCCCACCAAGCCCATGGTTGTTGAGACTTTC
TCCGAGTATCCTCCTCTTGGTCGTTTTGCCGTGAGGGACATGCGTCAAAC
TGTGGCTGTTGGAGTCATCAAGAGTGTGGAGAAGAAGGACCCCACTGGTG
CCAAGGTCACCAAGGCTGCAGCAAAGAAGAAATAA

Coding sequence (CDS) from alignment at Chr_LG20-CM007380.1:20595607..20599591+

>rna-TanjilR_01595_La_Tanjil_v1.0 ID=rna-TanjilR_01595_La_Tanjil_v1.0; Name=rna-TanjilR_01595; organism=Lupinus angustifolius; type=CDS; length=2277bp; location=Sequence derived from: Chr_LG20-CM007380.1:20595607..20599591+ (Lupinus angustifolius
ATGGGAAAAGAGAAGGTTCACATTAACATTGTCGTCATTGGACATGTCGA
TTCTGGGAAATCAACCACCACTGGCCACTTGATCTACAAGCTTGGAGGTA
TTGACAAGCGTGTGATTGAGAGGTTTGAGAAAGAGGCTGCTGAGATGAAC
AAGAGGTCATTCAAGTATGCCTGGGTGCTTGACAAGCTCAAGGCTGAGCG
TGAAAGAGGAATTACAATTGATATTGCTTTGTGGAAGTTTGAGACCACCA
AGTACTACTGCACAGTCATTGATGCACCCGGACATCGTGATTTCATCAAA
AACATGATTACTGGAACATCACAGGCTGACTGTGCTGTCCTTATTATTGA
TTCCACCACTGGTGGTTTTGAAGCTGGTATTTCCAAGGATGGACAGACCC
GTGAGCATGCTCTGCTTGCTTTCACTCTTGGAGTCAAGCAAATGATCTGT
TGTTGTAACAAGaTGGATGCCACTACACCCAAGTACTCTAAGGCTAGGTA
TGATGAAATCGTGAAGGAAGTTTCTTCTTACCTGAAGAAGGTTGGTTACA
ACCCAGACAAAATTCCTTTTGTGCCCATCTCTGGTTTCGAGGGAGACAAC
ATGATTGAGAGGTCCACCAACCTTGACTGGTACAAGGGACCAACTCTACT
TGAGGCTCTTGACCAGATCAATGAGCCCAAGAGACCCACAGACAAGCCTC
TCAGGCTTCCATTGCAGGATGTCTACAAGATTGGTGGTATTGGAACTGTG
CCAGTGGGACGTGTTGAGACTGGTGTTGTGAAGCCTGGTATGCTTGTGAC
TTTTGGTCCCACTGGACTGACAACTGAAGTTAAGTCTGTGGAGATGCACC
ACGAGGCTCTCCAAGAAGCTCTTCCAGGAGACAATGTTGGATTCAATGTG
AAGAATGTTGCAGTCAAGGATCTCAAGCACATCATGGGAAAAGAGAAGGT
TCACATTAACATTGTCGTCATTGGACATGTCGATTCTGGGAAATCAACCA
CCACTGGCCACTTGATCTACAAGCTTGGAGGTATTGACAAGCGTGTGATT
GAGAGGTTTGAGAAAGAGGCTGCTGAGATGAACAAGAGGTCATTCAAGTA
TGCCTGGGTGCTTGACAAGCTCAAGGCTGAGCGTGAAAGAGGAATTACAA
TTGATATTGCTTTGTGGAAGTTTGAGACCACCAAGTACTACTGCACAGTC
ATTGATGCACCCGGACATCGTGATTTCATCAAAAACATGATTACTGGAAC
ATCACAGGCTGACTGTGCTGTCCTTATTATTGATTCCACCACTGGTGGTT
TTGAAGCTGGTATTTCCAAGGATGGACAGACCCGTGAGCATGCTCTGCTT
GCTTTCACTCTTGGAGTCAAGCAAATGATCTGTTGTTGTAACAAGaTGGA
TGCCACTACACCCAAGTACTCTAAGGCTAGGTATGATGAAATCGTGAAGG
AAGTTTCTTCTTACCTGAAGAAGGTTGGTTACAACCCAGACAAAATTCCT
TTTGTGCCCATCTCTGGTTTCGAGGGAGACAACATGATTGAGAGGTCCAC
CAACCTTGACTGGTACAAGGGACCAACTCTACTTGAGGCTCTTGACCAGA
TCAATGAGCCCAAGAGACCCACAGACAAGCCTCTCAGGCTTCCATTGCAG
GATGTCTACAAGATTGGTGGTATTGGAACTGTGCCAGTGGGACGTGTTGA
GACTGGTGTTGTGAAGCCTGGTATGCTTGTGACTTTTGGTCCCACTGGAC
TGACAACTGAAGTTAAGTCTGTGGAGATGCACCACGAGGCTCTCCAAGAA
GCTCTTCCAGGAGACAATGTTGGATTCAATGTTAAGAATGTTGCAGTCAA
GGATCTCAAGCGTGGTTTCGTTGCCTCAAACTCTAAGGATGACCCTGCCA
AGGAAGCTGCTAACTTCACATCCCAAGTCATTATCATGAACCATCCTGGC
CAGATTGGAAATGGATATGCACCTGTGCTTGATTGTCACACTTCTCATAT
TGCCGTTAAGTTTGGTGAACTCTTGACCAAGATAGACAGGCGATCTGGTA
AGGAGCTTGAGAAGGAGCCCAAATTTTTGAAGAATGGTGATGCTGGTATG
GTTAAGATGATTCCCACCAAGCCCATGGTTGTTGAGACTTTCTCCGAGTA
TCCTCCTCTTGGTCGTTTTGCCGTGAGGGACATGCGTCAAACTGTGGCTG
TTGGAGTCATCAAGAGTGTGGAGAAGAAGGACCCCACTGGTGCCAAGGTC
ACCAAGGCTGCAGCAAAGAAGAAATAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000795	T_Tr_GTP-bd_dom
IPR004539	Transl_elong_EF1A_euk/arc
IPR004161	EFTu-like_2
IPR004160	Transl_elong_EFTu/EF1A_C
IPR031157	G_TR_CS
IPR027417	P-loop_NTPase
IPR009000	Transl_B-barrel_sf
IPR009001	Transl_elong_EF1A/Init_IF2_C

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding
GO:0003746	translation elongation factor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006414	translational elongation

Search form

rna-TanjilR_01595