Ca_08116, Ca_08116_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview


Name	Ca_08116
Unique Name	Ca_08116_v1.0_kabuli
Type	mRNA
Organism	Cicer arietinum (chickpea)
Sequence length	924

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Ca3	chromosome	Ca3:27928877..27929800 -	Cicer arietinum CDC Frontier genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum CDC Frontier genome v1.0	2013-01-01
InterProScan analysis for kabuli C. arietinum unigenes	2013-10-24
Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot	2013-10-24
Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL	2013-10-24
BLAST: C. arietinum CDC Frontier (kabuli), Swissprot	2019-05-21

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
capsR197	Pisum sativum Cameor genome v1a	Pisum sativum
cavuR163	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
capvR194	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
caccR0354	Cajanus cajan Asha genome v1.0	Cajanus cajan
caccR0365	Cajanus cajan Asha genome v1.0	Cajanus cajan
ancaL0086	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ancaL0937	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ascaL265	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
cazwsR172	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
catifR221	Vicia faba cv. Tiffany genome v1.0	Vicia faba
cavfhR222	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
cavrvR171	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
cavssR249	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
cavuaR154	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
cacanR081	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjcaL439	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
cacarR183		Cicer arietinum

Orthologs


Gene/Transcript	Assembly	Species
rna-KK1_018693	Cajanus cajan Asha genome v1.0	Cajanus cajan
jg33303.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
rna-TanjilR_13024	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
rna-XM_004493299.2	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Ca_08116-CDS1	Ca_08116-CDS1	Cicer arietinum	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Ca_08116_v1.0_kabuli	Ca_08116_v1.0_kabuli	Cicer arietinum	polypeptide

Homology

[Close]

BLAST of Ca_08116 vs. SwissProt
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 3.471e-9
Identity = 33/90 (36.67%), Postives = 51/90 (56.67%), Query Frame = 1

Query:  115 EDLLTLRLGGIHDKPISKFMKNSGDSSSSTQKVSGEPLFSSSSTQKASGEPLFESEVKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTK 384
            +++L ++  G  D  +   + + G ++SS   +      SSSST     +    ++ + F C+YC +KF +SQALGGHQNAHKRER   K
Sbjct:    9 QEMLKIKKQGHQDLELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 98

[Close]

BLAST of Ca_08116 vs. SwissProt
Match: ZFP5_ARATH (Zinc finger protein 5 OS=Arabidopsis thaliana GN=ZFP5 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 7.732e-9
Identity = 42/122 (34.43%), Postives = 54/122 (44.26%), Query Frame = 1

Query:  178 NSGDSSSSTQKVSGEPLFSSSSTQKASGEPLFESE--------VKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTK-LERKRREDEIDAALRYRSNVYTYPFPSPIPYHQGLPYYRSHINN 516
            +SG SS  T K+ G  L S S T + +      S         +K   C YC K+F  SQALGGHQNAHK+ER+  K L+ + R   I   L       T  F           +   H+NN
Sbjct:   14 SSGSSSDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQALGGHQNAHKKERLKKKRLQLQARRASIGYYLTNHQQPITTSFQRQYKTPSYCAFSSMHVNN 135

[Close]

BLAST of Ca_08116 vs. SwissProt
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 7.732e-9
Identity = 52/176 (29.55%), Postives = 76/176 (43.18%), Query Frame = 1

Query:  244 TQKASGEPLFESEVKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTKLERKRREDEIDAALRYRSNVYTYPFPSPIPYHQGLPYYRSHINNPMPSWPIGSPSGGYGGVYMSNTPPTTPQFGMQMSNPSLGTSQFGTNNYWSGGHGATL---PIQQRSNPLDIGHYTRSINQTSPSV 762
            T     E    +E K F C+YC + F +SQALGGHQNAHKRER   K  R +R     +A  +       PF      H+ L      I++ + S+      G YG +  S  P     F  Q   P++G      +N+    H   +    +  RSN +D    T  + + SP++
Sbjct:   45 TTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAK--RGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISHKLSSY--NGFGGHYGQINWSRLP-----FDQQ---PAIGKFP-SMDNFHHHHHQMMMMAPSVNSRSNNIDSPSNTGRVLEGSPTL 207

[Close]

BLAST of Ca_08116 vs. SwissProt
Match: ZFP6_ARATH (Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 3.837e-8
Identity = 45/139 (32.37%), Postives = 66/139 (47.48%), Query Frame = 1

Query:  190 SSSSTQKVSGEPLFSSSSTQKASGEPL----FESEVKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTKLERKRREDEIDAALRYRSNVYTYPFP-----SPIPYHQGLPYYRSHINNPMPSWPIGSPSGGYGGVYMSN 579
            + +S+ K+ G  L  ++S Q  S EP       SE +++ C YC ++F  SQALGGHQNAHK+ER       KR +      L    N + +  P     +P+P+    P+   H    M   P  S S    G +MS+
Sbjct:    3 TETSSLKLFGINLLETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKERQLL----KRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLLSQPHPPPH----MMLSPSSSSSKWLYGEHMSS 133

[Close]

BLAST of Ca_08116 vs. SwissProt
Match: JAG_ARATH (Zinc finger protein JAGGED OS=Arabidopsis thaliana GN=JAG PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 5.012e-8
Identity = 47/146 (32.19%), Postives = 64/146 (43.84%), Query Frame = 1

Query:  187 DSSSSTQKVSGEPLFSSSSTQKASGEPLFESEVKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTKLERKRREDEIDAALRYRSNVYTYPFPSPIPYHQGL--PYYRSHINNPMPSWPIGSPSGGYGGVYMSNTPPTTPQFGMQMS 618
            D S    K + E   SS   +K   +   +   K + C +C+ KF  SQALGGH N H++ER    L + R+       L YR++  T P  SP  YH       YRS  ++PM  +P  S +       M   PP  P    Q S
Sbjct:   16 DFSKDGNKQALEEGSSSGQRKKKGSKEGKDESGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNQARQ-------LVYRNDTITPPGISPFGYHHTTDPTIYRSVYSSPM-IYPGSSSTNLVPQPPMPPPPPPYPYSSNQYS 153

[Close]

BLAST of Ca_08116 vs. SwissProt
Match: ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 6.546e-8
Identity = 30/73 (41.10%), Postives = 42/73 (57.53%), Query Frame = 1

Query:  220 EPLFSSSSTQKASGEPLFESEVKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTKLERK--RREDEIDAALRY 432
            EP   SSS+  ++       + + F C+YC +KF +SQALGGHQNAHK ER   K  R+  R  + +D+   Y
Sbjct:   28 EPSSMSSSSSSSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELFRSSNTVDSDQPY 100

[Close]

BLAST of Ca_08116 vs. SwissProt
Match: ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 1.904e-7
Identity = 33/85 (38.82%), Postives = 45/85 (52.94%), Query Frame = 1

Query:  274 ESEVKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTKLERKRREDEIDAALRYRSNVYTYPFPS-PIPYHQGLPYYRSHINNPMP 525
            E+  + F C+YC +KF +SQALGGHQNAHKRER   K     R   +     +    YTY   S  +  H GL ++   ++ P P
Sbjct:   53 EANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAK-----RAMHMGRMFGHHHRPYTYTSSSLGMQAHSGLLHHT--LSQPQP 130

[Close]

BLAST of Ca_08116 vs. SwissProt
Match: ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 56.9954 bits (136), Expect = 1.904e-7
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 1

Query:  187 DSSSSTQKVSGEPLFSSSSTQKASGEPLFESEVKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTK 384
            +SSS T  +S     SS+  Q+   +P     V  F C+YC +KF +SQALGGHQNAHKRER   K
Sbjct:   53 ESSSLTLPLSSTSE-SSNPEQQQQQQPSVSKRV--FSCNYCQRKFYSSQALGGHQNAHKRERTLAK 115

[Close]

BLAST of Ca_08116 vs. SwissProt
Match: KNU_ARATH (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana GN=KNU PE=1 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 3.249e-7
Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 1

Query:  235 SSSTQKASGEPLFESEVKEFPCHYCNKKFPTSQALGGHQNAHKRER 372
            SSS + +       +  + FPC YC +KF TSQALGGHQNAHKRER
Sbjct:   19 SSSKRHSFSSSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRER 64

[Close]

BLAST of Ca_08116 vs. TrEMBL
Match: G7KT69_MEDTR (Zinc finger protein OS=Medicago truncatula GN=MTR_7g069900 PE=4 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.629e-50
Identity = 134/298 (44.97%), Postives = 158/298 (53.02%), Query Frame = 1

Query:    1 MSDRISIGNVEDRKLKRKM------EIXXXXXXXXXXXXKGVDLEDLLTLRLGGIHDKPISKFMKNSGDSSSSTQKVSGEPLFSSSSTQKASGEPLFESEVKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTKLERKRREDEIDAALRYRSNVYTYPFPSPIPYHQGLPYYRS---------HINNPMPSWPIGSPSGGYGGVYMSNTPPTTPQFGMQMSNPSLGTSQFGTNNYWSGGHGATLPIQQRSNPLDIGHYTRSINQTSPSVVEGVHRNFNGNFRSQTLSLLSRATISEGL 849
            MS+RI IGN EDR LKRKM      E                 +ED LTLRLG  H K  SK ++N G SSS                Q    EPL E +V EF C+YC+KKF TSQALGGHQNAHKRERV  K+E +RRE+E+D  LR+ S +          ++QG  Y+RS         H+ N  PSW IGSP GGYGGVYM NTP  T ++ MQM N    T QFG  N+W GG  A+LPI QRSN L +G + +              RNF     S TL L SR    EGL
Sbjct:    1 MSERIFIGNDEDRNLKRKMVEVPKLESKSKKESKIMPPTSESHVEDFLTLRLG-THTKSTSKPLENGGHSSSF---------------QNTLDEPLPEQKVVEFSCNYCDKKFSTSQALGGHQNAHKRERVLKKMEDRRREEEMDLTLRFSSFI----------HYQGHSYFRSANLHNPIGVHVTNAFPSW-IGSPYGGYGGVYMPNTPLAT-RYVMQMPNSPQATPQFGMTNFWGGGLNASLPIPQRSNTLGLGLFPQ--------------RNFIDQLHSHTLPLSSRDPNREGL 256

[Close]

BLAST of Ca_08116 vs. TrEMBL
Match: G7KT67_MEDTR (Zinc finger protein OS=Medicago truncatula GN=MTR_7g069880 PE=4 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.179e-46
Identity = 126/291 (43.30%), Postives = 158/291 (54.30%), Query Frame = 1

Query:    1 MSDRISIGNVEDRKLKRKM------EIXXXXXXXXXXXXKGVDLEDLLTLRLGGIHDKPISKFMKNSGDSSSSTQKVSGEPLFSSSSTQKASGEPLFESEVKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTKLERKRREDEIDAALRYRSNVYTYPFPSPIPYHQGLPYYRS-HINNPMPSWPIGS-PSGGYGGVYMSNTPPTTPQFGMQMSNPSLGTSQFGTNNYWSGGHGATLPIQQRSNPLDIGHYTRSINQTSPSVVEGVHRNFNGNFRSQTLSLLSRATISEGL 849
            MS+RISIGN EDR LKRKM      E+                +ED LTLRLG  H K  SK ++N G                SSS Q  + EPL E +V EF C+YC+KKF TSQALGGHQNAHKRER+  K+E K+RE+E+D+ L + S++          ++QG  Y+RS +++NP       + P GGYGGVYM NTP  T ++ MQM N    T QFG  N+W GG  A LPI QRSN L +G + +              RNF     S TL L SR    EG+
Sbjct:    1 MSERISIGNDEDRNLKRKMVEEPKLELKSKKESKIMPPTSESHVEDFLTLRLG-THTKSTSKPLENGG---------------LSSSFQNPTDEPLPEQKVVEFSCNYCDKKFSTSQALGGHQNAHKRERILKKMEDKKREEEMDSTLWFSSSI----------HYQGHSYFRSANLHNPNGVHVTNAFPYGGYGGVYMPNTPLAT-RYVMQMPNSPQATPQFGMTNFWGGGLNAALPIPQRSNTLGLGLFPQ--------------RNFIDQLLSHTLPLSSRDPKREGI 250

[Close]

BLAST of Ca_08116 vs. TrEMBL
Match: K7LIM7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.066e-17
Identity = 73/215 (33.95%), Postives = 112/215 (52.09%), Query Frame = 1

Query:    1 MSDRISIGNVEDRKLKRKMEIXXXXXXXXXXXXKGVDLEDLLTLRLGGIHDKPISKFMKNSGDSSSS--TQKVSGE---PLFSSSSTQKASGEPLFESEVKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTKLERKRREDEIDAAL-RYRSNVYTYPFPSPIPYHQGLPYY-RSHINNPMPSWPIGSPSGGYGGVYMSNTPPTTPQFGMQMSNP 624
            MSD + +G VE RKLKRK+E               VD E +L+L LG           K +G+SSS+   + + G    P F+S   +  + + +   + ++F C +C+KKFP+SQALGGHQNAHKRERV +++ +      + A +  Y S  + YPF  P   + G   +  +H++  + SWP   P     G++  NT  +  +FG  M+NP
Sbjct:    1 MSDELFVGGVESRKLKRKIEEASSTDV--------VDSEFVLSLGLGN---------NKMTGESSSNFLCKSLKGHKESPCFASKLVENTNNQ-VIRPKQRQFSCKFCDKKFPSSQALGGHQNAHKRERVLSRINKDMGTFGLGAHMCSYSSIPHQYPFRGPTSLYYGANMHPMAHMS--VMSWPHFVPGSSNQGLH--NTSISGQRFG--MTNP 191

[Close]

BLAST of Ca_08116 vs. TrEMBL
Match: D7TQV9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g00750 PE=4 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.637e-16
Identity = 59/160 (36.88%), Postives = 79/160 (49.38%), Query Frame = 1

Query:  244 TQKASGEPLFESEVKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTKLERKRREDEIDAALRYRSNVYTYPFPSPIPYHQGLPYY--------RSHINNPMPSWPIGSPSGGYGGV--YMSNTPPTTPQFGMQ--MSNPSLGTSQFG------TNNYWSG 669
            ++ A+G      E ++F C YCNKKF  SQALGGHQNAHKRER  TK      +D++D         + Y + S +PY++    Y        +S IN P+ SW  G    GYGGV  +   +     QF M      PS+   Q+G      TN+YW G
Sbjct:   56 SESANGVDQNGDEKRDFYCKYCNKKFANSQALGGHQNAHKRERGSTK------KDKVDQEALAHIESHLYSYSSIVPYNRHYGSYSKPLGIQSQSMINKPLHSWSRGGLGYGYGGVGGWSRYSMMNHGQFPMMNCTRQPSMVNQQYGTQPSPRTNSYWGG 209

[Close]

BLAST of Ca_08116 vs. TrEMBL
Match: K7K8R9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.701e-15
Identity = 60/179 (33.52%), Postives = 94/179 (52.51%), Query Frame = 1

Query:    1 MSDRISIGNVEDRKLKRKMEIXXXXXXXXXXXXKGVDLEDLLTLRLGGIHDKPISKFMKNSGDSSSSTQKVSGEPLFSSSSTQKASGEPLFESEVKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTKLERKRREDEIDAAL-RYRSNVYTYPFPSPIPYHQGLPYYRSHINNPMPSWP 534
            MSD + +G VE RKLKRK+E               +D E +L+L LG  ++K + +   N    S  + + S  P F+S   +  +   +   + ++F C +C+KKF +SQALGGHQNAHKRERV +++++      + A +  Y S  + +PF  P P + G   +     + MP WP
Sbjct:    1 MSDELLVGGVESRKLKRKIEEASSTDV--------IDSEFVLSLSLG--NNKMVGESSSNFLCKSLKSHQES--PGFASKLVENINNHVIMPKQ-RQFSCKFCDKKFSSSQALGGHQNAHKRERVISRMDKDMETFGLGAHMCSYSSIPHHHPFHGPTPLYYGANMHPMAHMSAMP-WP 165

[Close]

BLAST of Ca_08116 vs. TrEMBL
Match: B9N718_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_583672 PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.032e-12
Identity = 55/157 (35.03%), Postives = 75/157 (47.77%), Query Frame = 1

Query:  235 SSSTQKASGEPLFESEVKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTKLERKRREDEIDAALRYRSNVYTYPFPSPIPYHQGL-----PYYRSHINNPMPSWPIGSPSG----GYGGVYMSNTPPTTPQFGMQMSNPSLGTSQFGTNNYWSGGHG 678
            SS  ++++ E L ++E + FPC++C ++F TSQALGGHQNAHK+ER   K     R  E+D         Y Y   S  PY+  L         S I+   P +P  SP G     +GG     T  T P  G  ++  SL        N +SGG G
Sbjct:   55 SSHAKESTAETLKQTESRVFPCNFCKREFSTSQALGGHQNAHKQERTLAK-----RRQEMDVGALVHLPYYPYSSLSTNPYYGSLNRSLGVRLDSLIHKTSPPYPWTSPIGLRYDAHGGWSGQTTMNTQPSNGKSLTTESL--------NAFSGGFG 198

[Close]

BLAST of Ca_08116 vs. TrEMBL
Match: B6SNI5_MAIZE (Uncharacterized protein OS=Zea mays GN=ZEAMMB73_365164 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.664e-11
Identity = 48/129 (37.21%), Postives = 62/129 (48.06%), Query Frame = 1

Query:  286 KEFPCHYCNKKFPTSQALGGHQNAHKRERVFTKLERKRREDEIDAALRYRSNVYTYPFPSPIPYH--QGLPYYRSH----INNPMPSWPIGSP------SGGYGGVYMS-NTPPTTPQFGMQMSNPSLG 633
            ++F CHYC + FPTSQALGGHQNAHKRER       KR + +   A+    + Y YP P P P H       YR H       P P +P  +       S G G +    +  P TP  G+ +  P+ G
Sbjct:  115 RKFECHYCCRNFPTSQALGGHQNAHKRER----QHAKRAQFQTAMAMHQHRSQYYYPHPVPDPAHLYPAFAAYRHHHRFAAATPPPHYPSWAGATSRHYSSGPGSISQPIDGSPVTPPSGLWLQVPTGG 239

[Close]

BLAST of Ca_08116 vs. TrEMBL
Match: A5BLP6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011101 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.397e-11
Identity = 56/169 (33.14%), Postives = 76/169 (44.97%), Query Frame = 1

Query:  286 KEFPCHYCNKKFPTSQALGGHQNAHKRERVFTKLERKRREDEIDAALRYRSNVYTYPFPSPIPYHQGLPYYR-------SHINNPMPSWPIGSPSGGYGG--------------VYMSNTPPTTPQFGMQMSNPSLGTSQFGTNNYWS--GGHGATLPIQQRSNPLDIG 723
            ++  C YCNKKF  SQALGGHQNAHKRER    LERK + DEI   L   ++ +  P      Y +     R       S I+ P  SW  G    G+GG              +   N  PT   +  Q  +PS+       ++YWS  G  G   P + R++  ++G
Sbjct:   96 RDLYCKYCNKKFSNSQALGGHQNAHKRERA---LERKEKMDEI--TLANVASCFHPPLTLSSYYSRHASLKRPLGVRSQSAIHKPFNSWSCGGVGHGHGGAVGWWSTYSNLNRQISTINQQPTLMHYRTQQYSPSI-------DSYWSRVGVFGHQPPSETRTDHFNLG 252

[Close]

BLAST of Ca_08116 vs. TrEMBL
Match: M1C304_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400022777 PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.648e-10
Identity = 61/209 (29.19%), Postives = 88/209 (42.11%), Query Frame = 1

Query:  178 NSGDSSSSTQKVSGEPLFSSSSTQKASGEPLFESEVKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTKLERKRREDEIDAALRY-RSNVYTY-----PFPSPIPYHQGLPYYRS----------HINNPMPSWPIGS-------PSGGYGGVYMSNTPPTTPQFGMQMSNPSLGTSQFGTNNYWSGGHGATLPIQQRSNPLDIGHYTR 735
            N+  S+   +  +  P  +S S+ +A+ +    S+ + F C +C ++F TSQALGGHQNAHK+ER       KRR   +D    +   N + Y      F S IP+H   P   S          H     P+WP  S       P         S+   T    G  +   SL  SQF  NN   G +    PI    + LD  ++T+
Sbjct:   68 NTNCSNLELKLFNSTPARASESSNEATPKQRCSSDARTFSCSFCKREFSTSQALGGHQNAHKQERALA----KRRNGLVDVVSSFGPPNYHPYYNPYSSFNSHIPFHTSFPTRSSLGVQGDSSMIHKPTSYPTWPFFSGYNFRLNPKKWSSSSSSSSFFRTENVLGNNILGASLENSQFENNNNAKGFNLMNSPI-NLDDSLDGNNHTK 271

[Close]

BLAST of Ca_08116 vs. TrEMBL
Match: K3YUY2_SETIT (Uncharacterized protein OS=Setaria italica GN=Si018078m.g PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.811e-10
Identity = 57/174 (32.76%), Postives = 78/174 (44.83%), Query Frame = 1

Query:  190 SSSSTQKVSGEPLFSSSSTQKASGEPLFESEVKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTKLERKRRE--------DEIDAALRYRSNVYTYPFPSPIPYHQGLPYYRSHINNPMPSWPIGSPSGGYGGVYMSNTPPT--TPQFGMQMSNPSLGTSQFGTNNYWSGGHGA 681
            ++ S    +G  + SS S  K S      +E ++F CHYC + FPTSQALGGHQNAHKRER   K    +            +     Y  ++  +  P+P+P     P   +H     P W   SP G YGG   S + P   +P  G+    P+     FG     +G HGA
Sbjct:   54 AADSPDAANGSTVTSSESNAKQSVGASAAAE-RKFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQASLAMHRYVPGHMYGLFNYHHHLGRFDQPAPLP-----PPPPAH----YPMWTSASPPGPYGGGPGSMSQPINGSPVPGLWRMPPT-PMENFG----MTGRHGA 212

[Close]

BLAST of Ca_08116 vs. DB:Swiss
Match: GIS2_ARATH (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 9.647e-10
Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = 1

Query:  274 ESEVKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTK 384
            +++ K F CHYC + FPTSQALGGHQNAHKRER  TK
Sbjct:   49 DNKEKRFKCHYCFRNFPTSQALGGHQNAHKRERQQTK 85

[Close]

BLAST of Ca_08116 vs. DB:Swiss
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 4.034e-9
Identity = 39/110 (35.45%), Postives = 58/110 (52.73%), Query Frame = 1

Query:  262 EPLFESEVKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTKLERKRREDEIDAALRYRSNVYTYPFP-SPIPYHQGLPYYRS------HINNPMPSWPIGSPSGGYGGVY 570
            E    +E K F C+YC + F +SQALGGHQNAHKRER   K  R +R       +   ++ + +P+  SP+P+H     +RS       I++ + S+       G+GG Y
Sbjct:   51 ESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAK--RGQR-------MAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISHKLSSY------NGFGGHY 145

[Close]

BLAST of Ca_08116 vs. DB:Swiss
Match: GIS_ARATH (Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 4.202e-9
Identity = 25/36 (69.44%), Postives = 27/36 (75.00%), Query Frame = 1

Query:  277 SEVKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTK 384
            S  + F CHYC + FPTSQALGGHQNAHKRER   K
Sbjct:   86 SHNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAK 121

[Close]

BLAST of Ca_08116 vs. DB:Swiss
Match: ZFP6_ARATH (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.080e-8
Identity = 30/69 (43.48%), Postives = 42/69 (60.87%), Query Frame = 1

Query:  190 SSSSTQKVSGEPLFSSSSTQKASGEPL----FESEVKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTK 384
            + +S+ K+ G  L  ++S Q  S EP       SE +++ C YC ++F  SQALGGHQNAHK+ER   K
Sbjct:    3 TETSSLKLFGINLLETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKERQLLK 71

[Close]

BLAST of Ca_08116 vs. DB:Swiss
Match: ZFP8_ARATH (Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.215e-8
Identity = 24/33 (72.73%), Postives = 26/33 (78.79%), Query Frame = 1

Query:  286 KEFPCHYCNKKFPTSQALGGHQNAHKRERVFTK 384
            + F CHYC + FPTSQALGGHQNAHKRER   K
Sbjct:   93 RRFECHYCFRNFPTSQALGGHQNAHKRERQHAK 125

[Close]

BLAST of Ca_08116 vs. DB:Swiss
Match: KNU_ARATH (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 5.116e-8
Identity = 23/31 (74.19%), Postives = 25/31 (80.65%), Query Frame = 1

Query:  292 FPCHYCNKKFPTSQALGGHQNAHKRERVFTK 384
            FPC YC +KF TSQALGGHQNAHKRER   +
Sbjct:   38 FPCQYCPRKFYTSQALGGHQNAHKRERAAAR 68

[Close]

BLAST of Ca_08116 vs. DB:Swiss
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 8.431e-8
Identity = 22/31 (70.97%), Postives = 25/31 (80.65%), Query Frame = 1

Query:  292 FPCHYCNKKFPTSQALGGHQNAHKRERVFTK 384
            F C+YC +KF +SQALGGHQNAHKRER   K
Sbjct:   68 FSCNYCQRKFYSSQALGGHQNAHKRERTLAK 98

[Close]

BLAST of Ca_08116 vs. DB:Swiss
Match: ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 8.470e-8
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = 1

Query:  274 ESEVKEFPCHYCNKKFPTSQALGGHQNAHKRERVFTK 384
            E+  + F C+YC +KF +SQALGGHQNAHKRER   K
Sbjct:   53 EANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAK 89

[Close]

BLAST of Ca_08116 vs. DB:Swiss
Match: ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 55.4546 bits (132), Expect = 1.197e-7
Identity = 22/33 (66.67%), Postives = 26/33 (78.79%), Query Frame = 1

Query:  286 KEFPCHYCNKKFPTSQALGGHQNAHKRERVFTK 384
            + F C+YC +KF +SQALGGHQNAHKRER   K
Sbjct:   83 RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 115

[Close]

BLAST of Ca_08116 vs. DB:Swiss
Match: ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 2.840e-7
Identity = 24/45 (53.33%), Postives = 31/45 (68.89%), Query Frame = 1

Query:  292 FPCHYCNKKFPTSQALGGHQNAHKRERVFTKLERK--RREDEIDA 420
            F C+YC +KF +SQALGGHQNAHK ER   K  R+  R  + +D+
Sbjct:   52 FSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELFRSSNTVDS 96

The following BLAST results are available for this feature:

BLAST of Ca_08116 vs. SwissProt
BLAST of Ca_08116 vs. TrEMBL
BLAST of Ca_08116 vs. DB:Swiss

BLAST of Ca_08116 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 9

Position :

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Match Name	E-value	Identity	Description
ZFP1_ARATH	3.471e-9	36.67	Zinc finger protein 1 OS=Arabidopsis thaliana GN=Z...	[more]
ZFP5_ARATH	7.732e-9	34.43	Zinc finger protein 5 OS=Arabidopsis thaliana GN=Z...	[more]
ZFP3_ARATH	7.732e-9	29.55	Zinc finger protein 3 OS=Arabidopsis thaliana GN=Z...	[more]
ZFP6_ARATH	3.837e-8	32.37	Zinc finger protein 6 OS=Arabidopsis thaliana GN=Z...	[more]
JAG_ARATH	5.012e-8	32.19	Zinc finger protein JAGGED OS=Arabidopsis thaliana...	[more]
ZFP2_ARATH	6.546e-8	41.10	Zinc finger protein 2 OS=Arabidopsis thaliana GN=Z...	[more]
ZFP7_ARATH	1.904e-7	38.82	Zinc finger protein 7 OS=Arabidopsis thaliana GN=Z...	[more]
ZFP4_ARATH	1.904e-7	48.48	Zinc finger protein 4 OS=Arabidopsis thaliana GN=Z...	[more]
KNU_ARATH	3.249e-7	56.52	Zinc finger protein KNUCKLES OS=Arabidopsis thalia...	[more]

BLAST of Ca_08116 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25

Position :

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Match Name	E-value	Identity	Description
G7KT69_MEDTR	3.629e-50	44.97	Zinc finger protein OS=Medicago truncatula GN=MTR_...	[more]
G7KT67_MEDTR	3.179e-46	43.30	Zinc finger protein OS=Medicago truncatula GN=MTR_...	[more]
K7LIM7_SOYBN	1.066e-17	33.95	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
D7TQV9_VITVI	7.637e-16	36.88	Putative uncharacterized protein OS=Vitis vinifera...	[more]
K7K8R9_SOYBN	1.701e-15	33.52	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
B9N718_POPTR	1.032e-12	35.03	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B6SNI5_MAIZE	5.664e-11	37.21	Uncharacterized protein OS=Zea mays GN=ZEAMMB73_36...	[more]
A5BLP6_VITVI	7.397e-11	33.14	Putative uncharacterized protein OS=Vitis vinifera...	[more]
M1C304_SOLTU	1.648e-10	29.19	Uncharacterized protein OS=Solanum tuberosum GN=PG...	[more]
K3YUY2_SETIT	2.811e-10	32.76	Uncharacterized protein OS=Setaria italica GN=Si01...	[more]

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BLAST of Ca_08116 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
GIS2_ARATH	9.647e-10	70.27	Zinc finger protein GIS2 OS=Arabidopsis thaliana O...	[more]
ZFP3_ARATH	4.034e-9	35.45	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3...	[more]
GIS_ARATH	4.202e-9	69.44	Zinc finger protein GIS OS=Arabidopsis thaliana OX...	[more]
ZFP6_ARATH	1.080e-8	43.48	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3...	[more]
ZFP8_ARATH	1.215e-8	72.73	Zinc finger protein 8 OS=Arabidopsis thaliana OX=3...	[more]
KNU_ARATH	5.116e-8	74.19	Zinc finger protein KNUCKLES OS=Arabidopsis thalia...	[more]
ZFP1_ARATH	8.431e-8	70.97	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3...	[more]
ZFP7_ARATH	8.470e-8	62.16	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3...	[more]
ZFP4_ARATH	1.197e-7	66.67	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3...	[more]
ZFP2_ARATH	2.840e-7	53.33	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3...	[more]

InterPro

Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 100..120 score
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 98..125 score: 11
IPR013087	Zinc finger, C2H2-type/integrase, DNA-binding	GENE3D	3.30.160.60	no description	coord: 96..126 score: 0.0
None	No IPR available	PANTHER	PTHR11389	FAMILY NOT NAMED	coord: 58..145 score: 3.8
None	No IPR available	PANTHER	PTHR11389:SF374	GIS2 (GLABROUS INFLORESCENCE STEMS 2); NUCLEIC ACID BINDING / TRANSCRIPTION FAC	coord: 58..145 score: 3.8
None	No IPR available	SEG	seg	seg	coord: 22..33 score: NAcoord: 284..298 score
None	No IPR available	SUPERFAMILY	57667	C2H2 and C2HC zinc fingers	coord: 93..129 score: 4.5
None	No IPR available	SEG	seg	seg	coord: 33..43 score
None	No IPR available	SEG	seg	seg	coord: 1..16 score: NAcoord: 26..45 score

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Ca3:27928877..27929800-
coding sequence from alignment at Ca3:27928877..27929800-

mRNA sequence

>Ca_08116_v1.0_kabuli ID=Ca_08116_v1.0_kabuli; Name=Ca_08116; organism=Cicer arietinum; type=mRNA; length=924bp
ATGTCTGACAGAATCTCCATTGGAAATGTTGAGGACAGAAAGCTCAAACG
CAAGATGGAGATAGAGTCGGAGCCAAGTTCAACACCAACATCTGAATCCA
AGGGTGTGGATTTAGAAGATTTACTAACTTTGAGACTTGGTGGAATTCAC
GACAAGCCTATTTCCAAATTCATGAAGAATTCGGGAGATTCGAGTTCATC
GACTCAGAAAGTTTCTGGTGAACCTTTATTTTCAAGTTCATCAACTCAAA
AAGCTTCTGGTGAACCTTTGTTTGAGTCAGAAGTGAAGGAATTTCCTTGT
CACTATTGTAACAAAAAATTCCCCACTTCTCAAGCTCTTGGGGGACACCA
AAATGCTCACAAACGTGAGCGCGTGTTCACAAAATTGGAACGAAAAAGGA
GAGAGGATGAGATTGATGCAGCCCTAAGGTATAGATCTAATGTATACACT
TACCCATTTCCAAGTCCTATTCCCTATCATCAAGGGTTACCTTATTACCG
TAGCCATATCAACAATCCCATGCCTTCTTGGCCTATTGGTTCTCCTAGTG
GCGGTTATGGAGGAGTGTATATGTCCAATACACCCCCTACAACACCACAA
TTTGGGATGCAAATGTCAAATCCATCCCTTGGAACATCACAATTTGGGAC
AAATAATTATTGGAGTGGAGGTCATGGTGCTACTTTACCAATTCAACAAA
GGTCAAACCCTTTGGATATAGGACATTATACTCGATCTATTAATCAAACA
TCTCCTTCGGTTGTTGAGGGTGTACACAGAAATTTTAATGGTAATTTTCG
TTCTCAAACTCTTTCTTTATTATCTCGTGCTACTATTAGTGAAGGTCTTG
TTCAAACAAATTCCAATGTGTCTTCGTCAAAGCAATCAACCTCGGATCAA
CTCGACTTGAAACTTAGTCTTTAA

protein sequence of Ca_08116_v1.0_kabuli

>Ca_08116_v1.0_kabuli ID=Ca_08116_v1.0_kabuli; Name=Ca_08116_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=307bp
MSDRISIGNVEDRKLKRKMEIESEPSSTPTSESKGVDLEDLLTLRLGGIH
DKPISKFMKNSGDSSSSTQKVSGEPLFSSSSTQKASGEPLFESEVKEFPC
HYCNKKFPTSQALGGHQNAHKRERVFTKLERKRREDEIDAALRYRSNVYT
YPFPSPIPYHQGLPYYRSHINNPMPSWPIGSPSGGYGGVYMSNTPPTTPQ
FGMQMSNPSLGTSQFGTNNYWSGGHGATLPIQQRSNPLDIGHYTRSINQT
SPSVVEGVHRNFNGNFRSQTLSLLSRATISEGLVQTNSNVSSSKQSTSDQ
LDLKLSL

mRNA from alignment at Ca3:27928877..27929800-

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ca_08116_v1.0_kabuli ID=Ca_08116_v1.0_kabuli; Name=Ca_08116; organism=Cicer arietinum; type=mRNA; length=924bp; location=Sequence derived from: Ca3:27928877..27929800- (Cicer arietinum
ATGTCTGACAGAATCTCCATTGGAAATGTTGAGGACAGAAAGCTCAAACG
CAAGATGGAGATAGAGTCGGAGCCAAGTTCAACACCAACATCTGAATCCA
AGGGTGTGGATTTAGAAGATTTACTAACTTTGAGACTTGGTGGAATTCAC
GACAAGCCTATTTCCAAATTCATGAAGAATTCGGGAGATTCGAGTTCATC
GACTCAGAAAGTTTCTGGTGAACCTTTATTTTCAAGTTCATCAACTCAAA
AAGCTTCTGGTGAACCTTTGTTTGAGTCAGAAGTGAAGGAATTTCCTTGT
CACTATTGTAACAAAAAATTCCCCACTTCTCAAGCTCTTGGGGGACACCA
AAATGCTCACAAACGTGAGCGCGTGTTCACAAAATTGGAACGAAAAAGGA
GAGAGGATGAGATTGATGCAGCCCTAAGGTATAGATCTAATGTATACACT
TACCCATTTCCAAGTCCTATTCCCTATCATCAAGGGTTACCTTATTACCG
TAGCCATATCAACAATCCCATGCCTTCTTGGCCTATTGGTTCTCCTAGTG
GCGGTTATGGAGGAGTGTATATGTCCAATACACCCCCTACAACACCACAA
TTTGGGATGCAAATGTCAAATCCATCCCTTGGAACATCACAATTTGGGAC
AAATAATTATTGGAGTGGAGGTCATGGTGCTACTTTACCAATTCAACAAA
GGTCAAACCCTTTGGATATAGGACATTATACTCGATCTATTAATCAAACA
TCTCCTTCGGTTGTTGAGGGTGTACACAGAAATTTTAATGGTAATTTTCG
TTCTCAAACTCTTTCTTTATTATCTCGTGCTACTATTAGTGAAGGTCTTG
TTCAAACAAATTCCAATGTGTCTTCGTCAAAGCAATCAACCTCGGATCAA
CTCGACTTGAAACTTAGTCTTTAA

Coding sequence (CDS) from alignment at Ca3:27928877..27929800-

>Ca_08116_v1.0_kabuli ID=Ca_08116_v1.0_kabuli; Name=Ca_08116; organism=Cicer arietinum; type=CDS; length=924bp; location=Sequence derived from: Ca3:27928877..27929800- (Cicer arietinum
ATGTCTGACAGAATCTCCATTGGAAATGTTGAGGACAGAAAGCTCAAACG
CAAGATGGAGATAGAGTCGGAGCCAAGTTCAACACCAACATCTGAATCCA
AGGGTGTGGATTTAGAAGATTTACTAACTTTGAGACTTGGTGGAATTCAC
GACAAGCCTATTTCCAAATTCATGAAGAATTCGGGAGATTCGAGTTCATC
GACTCAGAAAGTTTCTGGTGAACCTTTATTTTCAAGTTCATCAACTCAAA
AAGCTTCTGGTGAACCTTTGTTTGAGTCAGAAGTGAAGGAATTTCCTTGT
CACTATTGTAACAAAAAATTCCCCACTTCTCAAGCTCTTGGGGGACACCA
AAATGCTCACAAACGTGAGCGCGTGTTCACAAAATTGGAACGAAAAAGGA
GAGAGGATGAGATTGATGCAGCCCTAAGGTATAGATCTAATGTATACACT
TACCCATTTCCAAGTCCTATTCCCTATCATCAAGGGTTACCTTATTACCG
TAGCCATATCAACAATCCCATGCCTTCTTGGCCTATTGGTTCTCCTAGTG
GCGGTTATGGAGGAGTGTATATGTCCAATACACCCCCTACAACACCACAA
TTTGGGATGCAAATGTCAAATCCATCCCTTGGAACATCACAATTTGGGAC
AAATAATTATTGGAGTGGAGGTCATGGTGCTACTTTACCAATTCAACAAA
GGTCAAACCCTTTGGATATAGGACATTATACTCGATCTATTAATCAAACA
TCTCCTTCGGTTGTTGAGGGTGTACACAGAAATTTTAATGGTAATTTTCG
TTCTCAAACTCTTTCTTTATTATCTCGTGCTACTATTAGTGAAGGTCTTG
TTCAAACAAATTCCAATGTGTCTTCGTCAAAGCAATCAACCTCGGATCAA
CTCGACTTGAAACTTAGTCTTTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007087	Znf_C2H2
IPR013087	Znf_C2H2_type

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0003676	nucleic acid binding

Search form

Ca_08116, Ca_08116_v1.0_kabuli (mRNA) Cicer arietinum

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