Ca_04807, Ca_04807_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_04807
Unique NameCa_04807_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length597
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca5chromosomeCa5:31081827..31082423 -Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR381Pisum sativum Cameor genome v1aPisum sativum
capsR384Pisum sativum Cameor genome v1aPisum sativum
cavuR444Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR446Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR454Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR523Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0708Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0339Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0392Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0763Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0956Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL041Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL201Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL689Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR330Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR353Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR364Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR401Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR368Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
catifR430Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR403Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR433Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR419Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR472Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR408Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR438Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR357Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR413Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR189Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR214Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL264Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL560Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL691Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL756Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR393Cicer arietinum
cacarR427Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-TanjilR_05101Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Psat5g008800.1Pisum sativum Cameor genome v1aPisum sativum
rna-XM_014652377.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg56072.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.4g081120.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat02G0429700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Va06G015220.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
LR48_mrnaVigan06g061900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vfaba.Tiffany.R1.2g171840.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Phvul.003G271400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Hedin2.R1.1g348080.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.009G007400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Tiffany.R1.1g281320.1Vicia faba cv. Tiffany genome v1.0Vicia faba
LR48_mrnaVigan09g040800Vigna angularis Jingnong 6 genome v1.1Vigna angularis
evm.model.Chr02.1135Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Hedin2.R1.4g107440.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
evm.model.Chr09.1158Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-TanjilR_05394Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg42240.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.2g212560.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
LR48_mrnaVigan01g167700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Va04G070960.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_014644993.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Phvul.002G118000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat05G0027500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-TanjilR_27712Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun09g262700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-KK1_019497Cajanus cajan Asha genome v1.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004500779.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_004512229.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_04807-CDS1Ca_04807-CDS1Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_04807_v1.0_kabuliCa_04807_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_04807 vs. SwissProt
Match: ATL80_ARATH (RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.553e-39
Identity = 82/131 (62.60%), Postives = 95/131 (72.52%), Query Frame = 1 
Query:  208 PPAAANKGVKKKVLRSLPKHTATAES--AVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGGIPVXXXXXXXXXXXXXXXXXLVPEPETRLKVREDDGNRFLP 594
            P AAANKG+KKKVL+SLPK T + ES  + KF++CAICL+EF+AGDE+RVLPQCGHGFHV+CID WL SHSSCPSCRQILVV+RC KCGG+P                    PE E R+K  EDD N FLP
Sbjct:   77 PVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLP----------GSSSSGLESEPEIEIRIKQGEDDPNSFLP 197
[Close]
BLAST of Ca_04807 vs. SwissProt
Match: ATL8_ARATH (RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 2.823e-38
Identity = 80/124 (64.52%), Postives = 90/124 (72.58%), Query Frame = 1 
Query:  208 PPAAANKGVKKKVLRSLPKHTATAES--AVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGGIPVXXXXXXXXXXXXXXXXXLVPEPETRLKVRED 573
            P AAANKG+KKKVLRSLPK T + +S  A K  +CAICL+EF AGDE+RVLPQCGHGFHVSCID WL SHSSCPSCRQILVV+RC KCGG+P                    PEP+TR+K RED
Sbjct:   70 PVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSG--------------PEPDTRIKQRED 179
[Close]
BLAST of Ca_04807 vs. SwissProt
Match: ATL44_ARATH (RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.320e-24
Identity = 52/90 (57.78%), Postives = 63/90 (70.00%), Query Frame = 1 
Query:  223 NKGVKKKVLRSLPKHTATAESAVK--------FSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCG 468
            NKG+KKK L+SLP+ T TA  +           ++CAICL++F  G+EIRVLP CGH FHV CID WL S SSCPSCR+IL   RCD+CG
Sbjct:   67 NKGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRRILTPVRCDRCG 156
[Close]
BLAST of Ca_04807 vs. SwissProt
Match: ATL45_ARATH (RING-H2 finger protein ATL45 OS=Arabidopsis thaliana GN=ATL45 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.151e-23
Identity = 50/98 (51.02%), Postives = 66/98 (67.35%), Query Frame = 1 
Query:  223 NKGVKKKVLRSLPKHTATAESAV----------------KFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCG 468
            NKG+KKK L++LPK T TA ++                   ++CAIC++EF+ G+EIR+LP C H FHV+CID WL S SSCPSCR+ILV  +CD+CG
Sbjct:   70 NKGLKKKALQALPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCRRILVPVKCDRCG 167
[Close]
BLAST of Ca_04807 vs. SwissProt
Match: ATL73_ARATH (RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.009e-19
Identity = 39/73 (53.42%), Postives = 54/73 (73.97%), Query Frame = 1 
Query:  226 KGVKKKVLRSLPKHTATAESAVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILV 444
            KG+KK+ L+ +P  + + E  +K ++C ICL +F  G+ +RVLP+C HGFHV CID WL SHSSCP+CRQ L+
Sbjct:   87 KGIKKRALKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSLL 159
[Close]
BLAST of Ca_04807 vs. SwissProt
Match: ATL76_ARATH (E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana GN=ATL76 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.902e-18
Identity = 42/90 (46.67%), Postives = 59/90 (65.56%), Query Frame = 1 
Query:  208 PPAAANKGVKKKVLRSLPKHTATAESAVKF--SDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGG 471
            P +++NKG+KKK LR  P  + + E  +     +C ICLS+F +G+++R+LP+C HGFHV CID WL+ H +CP CR  L V  C K  G
Sbjct:  101 PRSSSNKGIKKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCL-VETCQKILG 189
[Close]
BLAST of Ca_04807 vs. SwissProt
Match: ATL10_ARATH (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.238e-18
Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 1 
Query:  217 AANKGVKKKVLRSLPKHTATAESAVKFSD--CAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGG 471
            ++NKG+KKK LR  P  + + E  +   D  C ICLS+F +G+++R+LP+C HGFHV CID WL+ H +CP CR  L V  C K  G
Sbjct:  104 SSNKGIKKKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCL-VETCQKILG 189
[Close]
BLAST of Ca_04807 vs. SwissProt
Match: ATL77_ARATH (RING-H2 finger protein ATL77 OS=Arabidopsis thaliana GN=ATL77 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.229e-18
Identity = 42/90 (46.67%), Postives = 57/90 (63.33%), Query Frame = 1 
Query:  214 AAANKGVKKKVLRSLPKHTATAESAVKF--SDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQIL------VVSRCD 459
            ++ NKG+KKK L+ LP    + E  +     +C ICLS+F AG+++RVLP+C HGFH+ CID WL  H +CP CR  L      V+S CD
Sbjct:   98 SSVNKGIKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCRHCLVDTCQKVLSDCD 187
[Close]
BLAST of Ca_04807 vs. SwissProt
Match: ATL75_ARATH (RING-H2 finger protein ATL75 OS=Arabidopsis thaliana GN=ATL75 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.441e-18
Identity = 42/90 (46.67%), Postives = 57/90 (63.33%), Query Frame = 1 
Query:  208 PPAAANKGVKKKVLRSLPKHTATAESAVKF--SDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGG 471
            P  ++NKG+ KK LR  P  + + E  +     +C ICLS+F +G++IR+LP+C HGFHV CID WL+ H +CP CR  L V  C K  G
Sbjct:  102 PCGSSNKGINKKALRMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCL-VETCQKILG 190
[Close]
BLAST of Ca_04807 vs. SwissProt
Match: ATL78_ARATH (RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.103e-17
Identity = 43/87 (49.43%), Postives = 55/87 (63.22%), Query Frame = 1 
Query:  208 PPAAANKGVKKKVLRSLPKHTATAESAVKFSD--CAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDK 462
            P    N GVK+K L+S    + + E  +   D  CAICLSEF A + +++LP C HGFHV CID WL SHSSCP+CR  L +  C+K
Sbjct:   97 PVRLTNTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCL-IQTCEK 182
[Close]
BLAST of Ca_04807 vs. TrEMBL
Match: C6TKF9_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 3.847e-48
Identity = 101/149 (67.79%), Postives = 105/149 (70.47%), Query Frame = 1 
Query:  148 RCGCXXXXXXXXXXXXXXXXPPAAANKGVKKKVLRSLPKHTATAESAVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGGIPVXXXXXXXXXXXXXXXXXLVPEPETRLKVREDDGNRFLP 594
            RCGC                P +AANKGVKKKVLRSLPK TATAESAVKF+DCAICL+EF AGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGGIP                    P+ E R K REDD NRFLP
Sbjct:   46 RCGCLRRLRLSSSATTPQS-PTSAANKGVKKKVLRSLPKLTATAESAVKFADCAICLTEFAAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGGIPAPASSSSDPPP---------PDSEARFKGREDDANRFLP 184
[Close]
BLAST of Ca_04807 vs. TrEMBL
Match: I1K799_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 5.556e-47
Identity = 99/149 (66.44%), Postives = 106/149 (71.14%), Query Frame = 1 
Query:  148 RCGCXXXXXXXXXXXXXXXXPPAAANKGVKKKVLRSLPKHTATAESAVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGGIPVXXXXXXXXXXXXXXXXXLVPEPETRLKVREDDGNRFLP 594
            RCGC                PPA+ANKGVKKKVLRSLPK TA+AESAVKF+DCAICL+EF AGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGGIP                   + +   RLK RE+D NRFLP
Sbjct:   46 RCGCLRRLRLSSSNATPQP-PPASANKGVKKKVLRSLPKVTASAESAVKFADCAICLTEFAAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGGIPAPASSSSAPP---------LADSGDRLKGREEDANRFLP 184
[Close]
BLAST of Ca_04807 vs. TrEMBL
Match: G7J5Z4_MEDTR (RING-H2 finger protein ATL1B OS=Medicago truncatula GN=MTR_3g116000 PE=4 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 3.601e-46
Identity = 102/161 (63.35%), Postives = 103/161 (63.98%), Query Frame = 1 
Query:    1 MTRPFRYLGELNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RCGCXXXXXXXXXXXXXXXX-PPAAANKGVKKKVLRSLPKHTATAESAVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGGIP 477
            MTRPFR+LGELN                                      RCGC                 PPAAANKGVKKKVLRSLPK TAT ESAVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCID WLRSHSSCPSCRQILVVSRCDKCGGIP
Sbjct:    1 MTRPFRFLGELNSSSSDSPESSTVVDSDFVVILAALLCALICVLGLVAVTRCGCLRRLRLSSTTNNTSPAAPPAAANKGVKKKVLRSLPKLTATEESAVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDLWLRSHSSCPSCRQILVVSRCDKCGGIP 161
[Close]
BLAST of Ca_04807 vs. TrEMBL
Match: B9H5V1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_801629 PE=4 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 1.122e-39
Identity = 82/129 (63.57%), Postives = 91/129 (70.54%), Query Frame = 1 
Query:  208 PPAAANKGVKKKVLRSLPKHTATAESAVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGGIPVXXXXXXXXXXXXXXXXXLVPEPETRLKVREDDGNRFLP 594
            PP+ ANKG+KKK LRSLPK T + +SA KFSDCAICL+EF+ GDEIRVLPQCGHGFHV+CID WL SHSSCPSCRQIL+V RC KCGG+P                     E E  LK  EDD NRFLP
Sbjct:   42 PPSVANKGLKKKTLRSLPKQTFSEDSAGKFSDCAICLTEFSVGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILMVDRCQKCGGLPSGSSSISGGGG---------AETEAGLKECEDDANRFLP 161
[Close]
BLAST of Ca_04807 vs. TrEMBL
Match: B9GPP9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_753870 PE=4 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.500e-39
Identity = 82/129 (63.57%), Postives = 91/129 (70.54%), Query Frame = 1 
Query:  208 PPAAANKGVKKKVLRSLPKHTATAESAVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGGIPVXXXXXXXXXXXXXXXXXLVPEPETRLKVREDDGNRFLP 594
            PP+ ANKG+KKKVLRSLPK T + + + K  DCAICL+EF+AGDEIRVLPQCGHGFHVSCID WL SHSSCPSCRQILVV+RC KCGG+P                     E E  LK RED  NRFLP
Sbjct:   75 PPSVANKGLKKKVLRSLPKQTFSEDFSGKLPDCAICLTEFSAGDEIRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVARCQKCGGLP---SGSSSSNGGGGGGGGAETETEASLKEREDGANRFLP 200
[Close]
BLAST of Ca_04807 vs. TrEMBL
Match: B9R8S1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1601910 PE=4 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 5.569e-39
Identity = 80/125 (64.00%), Postives = 90/125 (72.00%), Query Frame = 1 
Query:  211 PAAANKGVKKKVLRSLPKHTATAESAVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGGIPVXXXXXXXXXXXXXXXXXLVPEPETRLKVREDDGNR 585
            P+AANKG+KKK+LRSLPK T +A+S  KF DCAICL+EF  GDEIRVLPQCGHGFHVSCID WL SHSSCPSCRQILVV+RC KCGG+P                     E E R+K RED+ NR
Sbjct:   83 PSAANKGLKKKILRSLPKQTFSADSTPKFYDCAICLAEFAPGDEIRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVARCQKCGGLPASASGGG--------------ESEARMKEREDNSNR 193
[Close]
BLAST of Ca_04807 vs. TrEMBL
Match: F6I6U9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g00870 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 7.273e-39
Identity = 81/129 (62.79%), Postives = 89/129 (68.99%), Query Frame = 1 
Query:  208 PPAAANKGVKKKVLRSLPKHTATAESAVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGGIPVXXXXXXXXXXXXXXXXXLVPEPETRLKVREDDGNRFLP 594
            P   ANKG+KKK+LRSLPK T  AE+A   +DCAICL+EF  GDEIRVLPQCGHGFHV CID WL SH SCPSCRQILVV+RC KCGG+P                     E E+RLK REDD NRFLP
Sbjct:   69 PQTPANKGLKKKILRSLPKVTYAAETAGNLTDCAICLTEFVGGDEIRVLPQCGHGFHVGCIDTWLGSHCSCPSCRQILVVARCQKCGGVPASSSSTG-------------AETESRLKEREDDVNRFLP 184
[Close]
BLAST of Ca_04807 vs. TrEMBL
Match: R0I0Q2_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021002mg PE=4 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.620e-38
Identity = 84/131 (64.12%), Postives = 93/131 (70.99%), Query Frame = 1 
Query:  208 PPAAANKGVKKKVLRSLPKHTATAES--AVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGGIPVXXXXXXXXXXXXXXXXXLVPEPETRLKVREDDGNRFLP 594
            P AAANKG+KKKVLRSLPK T + ES  A K  +CAICL+EF AGDE+RVLPQCGHGFHVSCID WL SHSSCPSCRQILVV+RC KCGG+P                     EP+TR+K  EDD N FLP
Sbjct:   70 PVAAANKGLKKKVLRSLPKLTYSPESSPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSSSG--------------SEPDTRIKQSEDDPNNFLP 186
[Close]
BLAST of Ca_04807 vs. TrEMBL
Match: R0GKD4_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10010177mg PE=4 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 3.609e-38
Identity = 83/129 (64.34%), Postives = 95/129 (73.64%), Query Frame = 1 
Query:  214 AAANKGVKKKVLRSLPKHTATAES--AVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGGIPVXXXXXXXXXXXXXXXXXLVPEPETRLKVREDDGNRFLP 594
            AAANKG+KKKVL+SLPK T + ES  + KF++CAICL+EF+AGDE+RVLPQCGHGFHVSCID WL SHSSCPSCRQILVV+RC KCGG+P                   VPE E R+K  EDD N FLP
Sbjct:  114 AAANKGLKKKVLQSLPKLTYSPESPSSKKFAECAICLAEFSAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVARCHKCGGLP--------GSSTSSPEPESVPEIEIRIKQGEDDPNSFLP 234
[Close]
BLAST of Ca_04807 vs. TrEMBL
Match: D7KTT0_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_316562 PE=4 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 6.157e-38
Identity = 83/131 (63.36%), Postives = 93/131 (70.99%), Query Frame = 1 
Query:  208 PPAAANKGVKKKVLRSLPKHTATAES--AVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGGIPVXXXXXXXXXXXXXXXXXLVPEPETRLKVREDDGNRFLP 594
            P AAANKG+KKKVLRSLPK T + +S  A K  +CAICL+EF AGDE+RVLPQCGHGFHVSCID WL SHSSCPSCRQILVV+RC KCGG+P                     EP+TR+K REDD   FLP
Sbjct:   70 PVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSTSG--------------SEPDTRIKQREDDPANFLP 186
[Close]
BLAST of Ca_04807 vs. DB:Swiss
Match: ATL80_ARATH (RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 4.674e-42
Identity = 80/131 (61.07%), Postives = 98/131 (74.81%), Query Frame = 1 
Query:  208 PPAAANKGVKKKVLRSLPKHTATAES--AVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGGIPVXXXXXXXXXXXXXXXXXLVPEPETRLKVREDDGNRFLP 594
            P AAANKG+KKKVL+SLPK T + ES  + KF++CAICL+EF+AGDE+RVLPQCGHGFHV+CID WL SHSSCPSCRQILVV+RC KCGG+P ++++   +              E R+K  EDD N FLP
Sbjct:   77 PVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSSSGLESEPEI----------EIRIKQGEDDPNSFLP 197
[Close]
BLAST of Ca_04807 vs. DB:Swiss
Match: ATL8_ARATH (RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 7.410e-41
Identity = 79/129 (61.24%), Postives = 94/129 (72.87%), Query Frame = 1 
Query:  208 PPAAANKGVKKKVLRSLPKHTATAES--AVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGGIPVXXXXXXXXXXXXXXXXXLVPEPETRLKVREDDGNRF 588
            P AAANKG+KKKVLRSLPK T + +S  A K  +CAICL+EF AGDE+RVLPQCGHGFHVSCID WL SHSSCPSCRQILVV+RC KCGG+P ++++                EP+TR+K RED  +  
Sbjct:   70 PVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGP--------------EPDTRIKQREDGPDNL 184
[Close]
BLAST of Ca_04807 vs. DB:Swiss
Match: ATL44_ARATH (Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=ATL44 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.717e-28
Identity = 52/90 (57.78%), Postives = 63/90 (70.00%), Query Frame = 1 
Query:  223 NKGVKKKVLRSLPKHTATAESAV--------KFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCG 468
            NKG+KKK L+SLP+ T TA  +           ++CAICL++F  G+EIRVLP CGH FHV CID WL S SSCPSCR+IL   RCD+CG
Sbjct:   67 NKGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRRILTPVRCDRCG 156
[Close]
BLAST of Ca_04807 vs. DB:Swiss
Match: ATL45_ARATH (Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=ATL45 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 3.339e-24
Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 1 
Query:  223 NKGVKKKVLRSLPKHT----------------ATAESAVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCG 468
            NKG+KKK L++LPK T                ++       ++CAIC++EF+ G+EIR+LP C H FHV+CID WL S SSCPSCR+ILV  +CD+CG
Sbjct:   70 NKGLKKKALQALPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCRRILVPVKCDRCG 167
[Close]
BLAST of Ca_04807 vs. DB:Swiss
Match: ATL73_ARATH (RING-H2 finger protein ATL73 OS=Arabidopsis thaliana OX=3702 GN=ATL73 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.161e-23
Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 1 
Query:  214 AAANKGVKKKVLRSLPKHTATAESAVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILV 444
            A   KG+KK+ L+ +P  + + E  +K ++C ICL +F  G+ +RVLP+C HGFHV CID WL SHSSCP+CRQ L+
Sbjct:   83 ANVAKGIKKRALKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSLL 159
[Close]
BLAST of Ca_04807 vs. DB:Swiss
Match: ATL10_ARATH (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.378e-20
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 1 
Query:  214 AAANKGVKKKVLRSLPKHTATAESAVKFSD--CAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGG 471
             ++NKG+KKK LR  P  + + E  +   D  C ICLS+F +G+++R+LP+C HGFHV CID WL+ H +CP CR  L V  C K  G
Sbjct:  103 GSSNKGIKKKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCL-VETCQKILG 189
[Close]
BLAST of Ca_04807 vs. DB:Swiss
Match: ATL77_ARATH (RING-H2 finger protein ATL77 OS=Arabidopsis thaliana OX=3702 GN=ATL77 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.742e-20
Identity = 42/95 (44.21%), Postives = 58/95 (61.05%), Query Frame = 1 
Query:  214 AAANKGVKKKVLRSLPKHTATAESAVKF--SDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQIL------VVSRCDKCGGI 474
            ++ NKG+KKK L+ LP    + E  +     +C ICLS+F AG+++RVLP+C HGFH+ CID WL  H +CP CR  L      V+S CD    +
Sbjct:   98 SSVNKGIKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCRHCLVDTCQKVLSDCDAADQV 192
[Close]
BLAST of Ca_04807 vs. DB:Swiss
Match: ATL75_ARATH (RING-H2 finger protein ATL75 OS=Arabidopsis thaliana OX=3702 GN=ATL75 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.035e-19
Identity = 42/90 (46.67%), Postives = 57/90 (63.33%), Query Frame = 1 
Query:  208 PPAAANKGVKKKVLRSLPKHTATAESAVKF--SDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGG 471
            P  ++NKG+ KK LR  P  + + E  +     +C ICLS+F +G++IR+LP+C HGFHV CID WL+ H +CP CR  L V  C K  G
Sbjct:  102 PCGSSNKGINKKALRMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCL-VETCQKILG 190
[Close]
BLAST of Ca_04807 vs. DB:Swiss
Match: ATL76_ARATH (E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana OX=3702 GN=ATL76 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.544e-19
Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = 1 
Query:  223 NKGVKKKVLRSLPKHTATAESAVKF--SDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGG 471
            NKG+KKK LR  P  + + E  +     +C ICLS+F +G+++R+LP+C HGFHV CID WL+ H +CP CR  LV + C K  G
Sbjct:  106 NKGIKKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVET-CQKILG 189
[Close]
BLAST of Ca_04807 vs. DB:Swiss
Match: ATL74_ARATH (RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.898e-19
Identity = 38/77 (49.35%), Postives = 50/77 (64.94%), Query Frame = 1 
Query:  217 AANKGVKKKVLRSLP-KHTATAESAVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILV 444
            A   G+KK+ L+  P     + E  +  ++CAICL EF  G+ +RVLP C H FH+SCID WL SHSSCP+CR  L+
Sbjct:   75 ADRAGLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSLI 151
The following BLAST results are available for this feature:
BLAST of Ca_04807 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 25
Match NameE-valueIdentityDescription
ATL80_ARATH2.553e-3962.60RING-H2 finger protein ATL80 OS=Arabidopsis thalia... [more]
ATL8_ARATH2.823e-3864.52RING-H2 finger protein ATL8 OS=Arabidopsis thalian... [more]
ATL44_ARATH2.320e-2457.78RING-H2 finger protein ATL44 OS=Arabidopsis thalia... [more]
ATL45_ARATH1.151e-2351.02RING-H2 finger protein ATL45 OS=Arabidopsis thalia... [more]
ATL73_ARATH1.009e-1953.42RING-H2 finger protein ATL73 OS=Arabidopsis thalia... [more]
ATL76_ARATH1.902e-1846.67E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis t... [more]
ATL10_ARATH4.238e-1848.28RING-H2 finger protein ATL10 OS=Arabidopsis thalia... [more]
ATL77_ARATH7.229e-1846.67RING-H2 finger protein ATL77 OS=Arabidopsis thalia... [more]
ATL75_ARATH9.441e-1846.67RING-H2 finger protein ATL75 OS=Arabidopsis thalia... [more]
ATL78_ARATH2.103e-1749.43RING-H2 finger protein ATL78 OS=Arabidopsis thalia... [more]

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BLAST of Ca_04807 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
C6TKF9_SOYBN3.847e-4867.79Uncharacterized protein OS=Glycine max PE=2 SV=1[more]
I1K799_SOYBN5.556e-4766.44Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
G7J5Z4_MEDTR3.601e-4663.35RING-H2 finger protein ATL1B OS=Medicago truncatul... [more]
B9H5V1_POPTR1.122e-3963.57Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GPP9_POPTR2.500e-3963.57Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9R8S1_RICCO5.569e-3964.00Putative uncharacterized protein OS=Ricinus commun... [more]
F6I6U9_VITVI7.273e-3962.79Putative uncharacterized protein OS=Vitis vinifera... [more]
R0I0Q2_9BRAS1.620e-3864.12Uncharacterized protein OS=Capsella rubella GN=CAR... [more]
R0GKD4_9BRAS3.609e-3864.34Uncharacterized protein OS=Capsella rubella GN=CAR... [more]
D7KTT0_ARALL6.157e-3863.36Putative uncharacterized protein OS=Arabidopsis ly... [more]

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BLAST of Ca_04807 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
ATL80_ARATH4.674e-4261.07RING-H2 finger protein ATL80 OS=Arabidopsis thalia... [more]
ATL8_ARATH7.410e-4161.24RING-H2 finger protein ATL8 OS=Arabidopsis thalian... [more]
ATL44_ARATH2.717e-2857.78Probable E3 ubiquitin-protein ligase ATL44 OS=Arab... [more]
ATL45_ARATH3.339e-2448.98Probable E3 ubiquitin-protein ligase ATL45 OS=Arab... [more]
ATL73_ARATH3.161e-2351.95RING-H2 finger protein ATL73 OS=Arabidopsis thalia... [more]
ATL10_ARATH1.378e-2047.73RING-H2 finger protein ATL10 OS=Arabidopsis thalia... [more]
ATL77_ARATH8.742e-2044.21RING-H2 finger protein ATL77 OS=Arabidopsis thalia... [more]
ATL75_ARATH1.035e-1946.67RING-H2 finger protein ATL75 OS=Arabidopsis thalia... [more]
ATL76_ARATH1.544e-1948.24E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis t... [more]
ATL74_ARATH1.898e-1949.35RING-H2 finger protein ATL74 OS=Arabidopsis thalia... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184Ring fingercoord: 102..143
score: 2.4
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 102..144
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10no descriptioncoord: 100..145
score: 1.1
NoneNo IPR availablePANTHERPTHR22764FAMILY NOT NAMEDcoord: 24..159
score: 2.9
NoneNo IPR availablePANTHERPTHR22764:SF16 ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEINcoord: 24..159
score: 2.9
NoneNo IPR availablePFAMPF13639zf-RING_2coord: 101..145
score: 2.6
NoneNo IPR availableSEGsegsegcoord: 13..49
score: NAcoord: 54..69
score: NAcoord: 161..177
score
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 75..150
score: 2
NoneNo IPR availableSEGsegsegcoord: 16..31
score
NoneNo IPR availableSEGsegsegcoord: 1..29
score: NAcoord: 112..126
score
NoneNo IPR availableSEGsegsegcoord: 22..38
score
NoneNo IPR availableSEGsegsegcoord: 51..79
score: NAcoord: 93..110
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_04807_v1.0_kabuli ID=Ca_04807_v1.0_kabuli; Name=Ca_04807; organism=Cicer arietinum; type=mRNA; length=597bp
ATGACTCGTCCCTTCAGATATCTCGGCGAGCTCAACTCGTCTTCCTCCGA
CTCATCTGATTCCTCCGTCGTTGATTCCGACTTCGTCGTTATCCTCGCCG
CTCTCCTCTGCGCACTCATCTGCGTTCTAGGTCTCGTCGCCGTCGCACGT
TGCGGTTGTCTTCGTCGCTTACGTATCTCCTCCACCACCCTCACGTCTAC
AACTACACCTCCTGCTGCAGCTAACAAAGGCGTCAAGAAGAAGGTTTTGC
GCTCTCTTCCGAAACACACAGCGACAGCCGAATCTGCTGTTAAATTCTCC
GATTGCGCGATCTGTCTGAGCGAATTCACCGCCGGAGATGAAATCCGAGT
GTTGCCTCAGTGCGGTCATGGATTCCACGTGTCTTGTATCGACGCGTGGC
TCAGATCTCATTCTTCGTGTCCGTCTTGCCGTCAGATTCTGGTAGTTTCT
AGATGCGACAAATGCGGTGGAATCCCCGTCGCTACTGCTACTGCTACTAA
TACCGCTGCCTGCTCTAGCTCCGCGCCGGCGCTGGTGCCGGAGCCTGAGA
CTAGATTAAAGGTAAGGGAGGACGACGGCAATAGATTCTTGCCTTAA
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protein sequence of Ca_04807_v1.0_kabuli

>Ca_04807_v1.0_kabuli ID=Ca_04807_v1.0_kabuli; Name=Ca_04807_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=198bp
MTRPFRYLGELNSSSSDSSDSSVVDSDFVVILAALLCALICVLGLVAVAR
CGCLRRLRISSTTLTSTTTPPAAANKGVKKKVLRSLPKHTATAESAVKFS
DCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVS
RCDKCGGIPVATATATNTAACSSSAPALVPEPETRLKVREDDGNRFLP
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mRNA from alignment at Ca5:31081827..31082423-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_04807_v1.0_kabuli ID=Ca_04807_v1.0_kabuli; Name=Ca_04807; organism=Cicer arietinum; type=mRNA; length=597bp; location=Sequence derived from: Ca5:31081827..31082423- (Cicer arietinum
ATGACTCGTCCCTTCAGATATCTCGGCGAGCTCAACTCGTCTTCCTCCGA
CTCATCTGATTCCTCCGTCGTTGATTCCGACTTCGTCGTTATCCTCGCCG
CTCTCCTCTGCGCACTCATCTGCGTTCTAGGTCTCGTCGCCGTCGCACGT
TGCGGTTGTCTTCGTCGCTTACGTATCTCCTCCACCACCCTCACGTCTAC
AACTACACCTCCTGCTGCAGCTAACAAAGGCGTCAAGAAGAAGGTTTTGC
GCTCTCTTCCGAAACACACAGCGACAGCCGAATCTGCTGTTAAATTCTCC
GATTGCGCGATCTGTCTGAGCGAATTCACCGCCGGAGATGAAATCCGAGT
GTTGCCTCAGTGCGGTCATGGATTCCACGTGTCTTGTATCGACGCGTGGC
TCAGATCTCATTCTTCGTGTCCGTCTTGCCGTCAGATTCTGGTAGTTTCT
AGATGCGACAAATGCGGTGGAATCCCCGTCGCTACTGCTACTGCTACTAA
TACCGCTGCCTGCTCTAGCTCCGCGCCGGCGCTGGTGCCGGAGCCTGAGA
CTAGATTAAAGGTAAGGGAGGACGACGGCAATAGATTCTTGCCTTAA
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Coding sequence (CDS) from alignment at Ca5:31081827..31082423-

>Ca_04807_v1.0_kabuli ID=Ca_04807_v1.0_kabuli; Name=Ca_04807; organism=Cicer arietinum; type=CDS; length=597bp; location=Sequence derived from: Ca5:31081827..31082423- (Cicer arietinum
ATGACTCGTCCCTTCAGATATCTCGGCGAGCTCAACTCGTCTTCCTCCGA
CTCATCTGATTCCTCCGTCGTTGATTCCGACTTCGTCGTTATCCTCGCCG
CTCTCCTCTGCGCACTCATCTGCGTTCTAGGTCTCGTCGCCGTCGCACGT
TGCGGTTGTCTTCGTCGCTTACGTATCTCCTCCACCACCCTCACGTCTAC
AACTACACCTCCTGCTGCAGCTAACAAAGGCGTCAAGAAGAAGGTTTTGC
GCTCTCTTCCGAAACACACAGCGACAGCCGAATCTGCTGTTAAATTCTCC
GATTGCGCGATCTGTCTGAGCGAATTCACCGCCGGAGATGAAATCCGAGT
GTTGCCTCAGTGCGGTCATGGATTCCACGTGTCTTGTATCGACGCGTGGC
TCAGATCTCATTCTTCGTGTCCGTCTTGCCGTCAGATTCTGGTAGTTTCT
AGATGCGACAAATGCGGTGGAATCCCCGTCGCTACTGCTACTGCTACTAA
TACCGCTGCCTGCTCTAGCTCCGCGCCGGCGCTGGTGCCGGAGCCTGAGA
CTAGATTAAAGGTAAGGGAGGACGACGGCAATAGATTCTTGCCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding