Vigna unguiculata L. Walp IT97K-499-35 genome v1.2
Genome Overview
The genome was sequenced and assembled as outlined in Liang Q, Muñoz-Amatriaín M, Shu S, Lo S, Wu X, Carlson JW, Davidson P, Goodstein DM, Phillips J, Janis NM, Lee EJ, Liang C, Morrell PL, Farmer AD, Xu P, Close TJ, Lonardi S. A view of the pan-genome of domesticated Cowpea (Vigna unguiculata [L.] Walp.). The plant genome. 2023 Mar 22; e20319. About the assembly:
Functional Analysis
Functional annotation files for the Vigna unguiculata L. Walp IT97K-499-35 genome v1.2 are available for download below. The Vigna unguiculata L. Walp IT97K-499-35 genome v1.2 proteins were analyzed using InterProScan in order to assign InterPro domains and Gene Ontology (GO) terms. Pathways analysis was performed using the KEGG Automatic Annotation Server (KAAS). Downloads
Assembly
The Vigna unguiculata L. Walp IT97K-499-35 genome v1.2 assembly files are available in FASTA format. Downloads
Gene Prediction
The Vigna unguiculata L. Walp IT97K-499-35 genome v1.2 gene prediction files are available in GFF3 and FASTA format. Downloads
Homology
Homology of the Vigna unguiculata L. Walp IT97K-499-35 genome v1.2 proteins was determined by pairwise sequence comparison using the blastp algorithm against various protein databases. An expectation value cutoff less than 1e-6 for the Arabidoposis proteins (Araport11, 2022-09), UniProtKB/SwissProt (Release 2024-03), and UniProtKB/TrEMBL (Release 2024-03) databases. The best hit reports are available for download in Excel format. Protein Homologs
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