Identification QTLs Controlling Genes for Se Uptake in Lentil Seeds

Publication Overview
TitleIdentification QTLs Controlling Genes for Se Uptake in Lentil Seeds
AuthorsAtes D, Sever T, Aldemir S, Yagmur B, Temel HY, Kaya HB, Alsaleh A, Kahraman A, Ozkan H, Vandenberg A, Tanyolac B
TypeJournal Article
Journal NamePlos 1
VolumeMarch 2016
Year2016
CitationAtes D, Sever T, Aldemir S, Yagmur B, Temel HY, Kaya HB, Alsaleh A, Kahraman A, Ozkan H, Vandenberg A, Tanyolac B. Identification QTLs Controlling Genes for Se Uptake in Lentil Seeds. 2016; March 2016.

Abstract

Article Authors Metrics Comments Related Content Correction Abstract Introduction Materials and Methods Results Discussion Supporting Information Acknowledgments Author Contributions References Reader Comments (1) Media Coverage (0) Figures Correction 14 Apr 2016: Ates D, Sever T, Aldemir S, Yagmur B, Temel HY, et al. (2016) Correction: Identification QTLs Controlling Genes for Se Uptake in Lentil Seeds. doi: info:doi/10.1371/journal.pone.0154054 View correction Abstract Lentil (Lens culinaris Medik.) is an excellent source of protein and carbohydrates and is also rich in essential trace elements for the human diet. Selenium (Se) is an essential micronutrient for human health and nutrition, providing protection against several diseases and regulating important biological systems. Dietary intake of 55 μg of Se per day is recommended for adults, with inadequate Se intake causing significant health problems. The objective of this study was to identify and map quantitative trait loci (QTL) of genes controlling Se accumulation in lentil seeds using a population of 96 recombinant inbred lines (RILs) developed from the cross “PI 320937” × “Eston” grown in three different environments for two years (2012 and 2013). Se concentration in seed varied between 119 and 883 μg/kg. A linkage map consisting of 1,784 markers (4 SSRs, and 1,780 SNPs) was developed. The map spanned a total length of 4,060.6 cM, consisting of 7 linkage groups (LGs) with an average distance of 2.3 cM between adjacent markers. Four QTL regions and 36 putative QTL markers, with LOD scores ranging from 3.00 to 4.97, distributed across two linkage groups (LG2 and LG5) were associated with seed Se concentration, explaining 6.3–16.9% of the phenotypic variation.
Featuremaps
This publication contains information about 1 maps:
Map Name
Lentil-PI 320937_x_Eston-RIL
Features
This publication contains information about 1,760 features:
Feature NameUniquenameType
SNPT1478SNPT1478genetic_marker
SNPT845SNPT845genetic_marker
SNPT1382SNPT1382genetic_marker
SNPT1990SNPT1990genetic_marker
SNPT2608SNPT2608genetic_marker
SNPT2882SNPT2882genetic_marker
SNPT1844SNPT1844genetic_marker
SNPT2800SNPT2800genetic_marker
SNPT1420SNPT1420genetic_marker
SNPT3882SNPT3882genetic_marker
SNPT1371SNPT1371genetic_marker
SNPT2027SNPT2027genetic_marker
SNPT1152SNPT1152genetic_marker
SNPT1542SNPT1542genetic_marker
SNPT124SNPT124genetic_marker
SNPT1970SNPT1970genetic_marker
SNPT1386SNPT1386genetic_marker
SNPT1521SNPT1521genetic_marker
SNPT4338SNPT4338genetic_marker
SNPT2992SNPT2992genetic_marker
SNPT2607SNPT2607genetic_marker
SNPT2991SNPT2991genetic_marker
SNPT1989SNPT1989genetic_marker
SNPT2661SNPT2661genetic_marker
SNPT1419SNPT1419genetic_marker

Pages

Projects
This publication contains information about 1 projects:
Project NameDescription
Lentil-QTL_Se_Uptake-Ates-2016
Stocks
This publication contains information about 3 stocks:
Stock NameUniquenameType
PI 320937PI 320937accession
EstonEstonaccession
PI 320937_x_EstonPI 320937_x_Estonpopulation
Properties
Additional details for this publication include:
Property NameValue
DOIhttp://dx.doi.org/10.1371/journal.pone.0149210
URLhttp://journals.plos.org/plosone/article?id=10.1371/journal.pone.0149210