Identification QTLs Controlling Genes for Se Uptake in Lentil Seeds

Publication Overview
TitleIdentification QTLs Controlling Genes for Se Uptake in Lentil Seeds
AuthorsAtes D, Sever T, Aldemir S, Yagmur B, Temel HY, Kaya HB, Alsaleh A, Kahraman A, Ozkan H, Vandenberg A, Tanyolac B
TypeJournal Article
Journal NamePlos 1
VolumeMarch 2016
Year2016
CitationAtes D, Sever T, Aldemir S, Yagmur B, Temel HY, Kaya HB, Alsaleh A, Kahraman A, Ozkan H, Vandenberg A, Tanyolac B. Identification QTLs Controlling Genes for Se Uptake in Lentil Seeds. 2016; March 2016.

Abstract

Article Authors Metrics Comments Related Content Correction Abstract Introduction Materials and Methods Results Discussion Supporting Information Acknowledgments Author Contributions References Reader Comments (1) Media Coverage (0) Figures Correction 14 Apr 2016: Ates D, Sever T, Aldemir S, Yagmur B, Temel HY, et al. (2016) Correction: Identification QTLs Controlling Genes for Se Uptake in Lentil Seeds. doi: info:doi/10.1371/journal.pone.0154054 View correction Abstract Lentil (Lens culinaris Medik.) is an excellent source of protein and carbohydrates and is also rich in essential trace elements for the human diet. Selenium (Se) is an essential micronutrient for human health and nutrition, providing protection against several diseases and regulating important biological systems. Dietary intake of 55 μg of Se per day is recommended for adults, with inadequate Se intake causing significant health problems. The objective of this study was to identify and map quantitative trait loci (QTL) of genes controlling Se accumulation in lentil seeds using a population of 96 recombinant inbred lines (RILs) developed from the cross “PI 320937” × “Eston” grown in three different environments for two years (2012 and 2013). Se concentration in seed varied between 119 and 883 μg/kg. A linkage map consisting of 1,784 markers (4 SSRs, and 1,780 SNPs) was developed. The map spanned a total length of 4,060.6 cM, consisting of 7 linkage groups (LGs) with an average distance of 2.3 cM between adjacent markers. Four QTL regions and 36 putative QTL markers, with LOD scores ranging from 3.00 to 4.97, distributed across two linkage groups (LG2 and LG5) were associated with seed Se concentration, explaining 6.3–16.9% of the phenotypic variation.
Features
This publication contains information about 1,760 features:
Feature NameUniquenameType
SNPT4234SNPT4234genetic_marker
SNPT3763SNPT3763genetic_marker
SNPT1179SNPT1179genetic_marker
SNPT3499SNPT3499genetic_marker
SNPT293SNPT293genetic_marker
SNPT13SNPT13genetic_marker
SNPT720SNPT720genetic_marker
SNPT4239SNPT4239genetic_marker
SNPT2763SNPT2763genetic_marker
SNPT2179SNPT2179genetic_marker
SNPT1591SNPT1591genetic_marker
SNPT1592SNPT1592genetic_marker
SNPT4106SNPT4106genetic_marker
SNPT2098SNPT2098genetic_marker
SNPT1726SNPT1726genetic_marker
SNPT4105SNPT4105genetic_marker
SNPT1501SNPT1501genetic_marker
SNPT3663SNPT3663genetic_marker
SNPT307SNPT307genetic_marker
SNPT2131SNPT2131genetic_marker
SNPT1683SNPT1683genetic_marker
SNPT1776SNPT1776genetic_marker
SNPT1684SNPT1684genetic_marker
SNPT4437SNPT4437genetic_marker
SNPT2947SNPT2947genetic_marker

Pages

Projects
This publication contains information about 1 projects:
Project NameDescription
Lentil-QTL_Se_Uptake-Ates-2016
Featuremaps
This publication contains information about 1 maps:
Map Name
Lentil-PI 320937_x_Eston-RIL
Stocks
This publication contains information about 3 stocks:
Stock NameUniquenameType
PI 320937PI 320937accession
EstonEstonaccession
PI 320937_x_EstonPI 320937_x_Estonpopulation
Properties
Additional details for this publication include:
Property NameValue
DOIhttp://dx.doi.org/10.1371/journal.pone.0149210
URLhttp://journals.plos.org/plosone/article?id=10.1371/journal.pone.0149210