Identification QTLs Controlling Genes for Se Uptake in Lentil Seeds

Publication Overview
TitleIdentification QTLs Controlling Genes for Se Uptake in Lentil Seeds
AuthorsAtes D, Sever T, Aldemir S, Yagmur B, Temel HY, Kaya HB, Alsaleh A, Kahraman A, Ozkan H, Vandenberg A, Tanyolac B
TypeJournal Article
Journal NamePlos 1
VolumeMarch 2016
Year2016
CitationAtes D, Sever T, Aldemir S, Yagmur B, Temel HY, Kaya HB, Alsaleh A, Kahraman A, Ozkan H, Vandenberg A, Tanyolac B. Identification QTLs Controlling Genes for Se Uptake in Lentil Seeds. 2016; March 2016.

Abstract

Article Authors Metrics Comments Related Content Correction Abstract Introduction Materials and Methods Results Discussion Supporting Information Acknowledgments Author Contributions References Reader Comments (1) Media Coverage (0) Figures Correction 14 Apr 2016: Ates D, Sever T, Aldemir S, Yagmur B, Temel HY, et al. (2016) Correction: Identification QTLs Controlling Genes for Se Uptake in Lentil Seeds. doi: info:doi/10.1371/journal.pone.0154054 View correction Abstract Lentil (Lens culinaris Medik.) is an excellent source of protein and carbohydrates and is also rich in essential trace elements for the human diet. Selenium (Se) is an essential micronutrient for human health and nutrition, providing protection against several diseases and regulating important biological systems. Dietary intake of 55 μg of Se per day is recommended for adults, with inadequate Se intake causing significant health problems. The objective of this study was to identify and map quantitative trait loci (QTL) of genes controlling Se accumulation in lentil seeds using a population of 96 recombinant inbred lines (RILs) developed from the cross “PI 320937” × “Eston” grown in three different environments for two years (2012 and 2013). Se concentration in seed varied between 119 and 883 μg/kg. A linkage map consisting of 1,784 markers (4 SSRs, and 1,780 SNPs) was developed. The map spanned a total length of 4,060.6 cM, consisting of 7 linkage groups (LGs) with an average distance of 2.3 cM between adjacent markers. Four QTL regions and 36 putative QTL markers, with LOD scores ranging from 3.00 to 4.97, distributed across two linkage groups (LG2 and LG5) were associated with seed Se concentration, explaining 6.3–16.9% of the phenotypic variation.
Features
This publication contains information about 1,760 features:
Feature NameUniquenameType
SNPT4438SNPT4438genetic_marker
SNPT3972SNPT3972genetic_marker
SNPT2948SNPT2948genetic_marker
SNPT3971SNPT3971genetic_marker
SNPT3664SNPT3664genetic_marker
SNPT308SNPT308genetic_marker
SNPT252SNPT252genetic_marker
SNPT2039SNPT2039genetic_marker
SNPT809SNPT809genetic_marker
SNPT1508SNPT1508genetic_marker
SNPT2112SNPT2112genetic_marker
SNPT910SNPT910genetic_marker
SNPT1698SNPT1698genetic_marker
SNPT2132SNPT2132genetic_marker
SNPT1149SNPT1149genetic_marker
SNPT193SNPT193genetic_marker
SNPT715SNPT715genetic_marker
SNPT1901SNPT1901genetic_marker
SNPT160SNPT160genetic_marker
SNPT451SNPT451genetic_marker
SNPT240SNPT240genetic_marker
SNPT239SNPT239genetic_marker
SNPT1888SNPT1888genetic_marker
SNPT1887SNPT1887genetic_marker
SNPT1199SNPT1199genetic_marker

Pages

Projects
This publication contains information about 1 projects:
Project NameDescription
Lentil-QTL_Se_Uptake-Ates-2016
Featuremaps
This publication contains information about 1 maps:
Map Name
Lentil-PI 320937_x_Eston-RIL
Stocks
This publication contains information about 3 stocks:
Stock NameUniquenameType
PI 320937PI 320937accession
EstonEstonaccession
PI 320937_x_EstonPI 320937_x_Estonpopulation
Properties
Additional details for this publication include:
Property NameValue
DOIhttp://dx.doi.org/10.1371/journal.pone.0149210
URLhttp://journals.plos.org/plosone/article?id=10.1371/journal.pone.0149210