Identification QTLs Controlling Genes for Se Uptake in Lentil Seeds

Publication Overview
TitleIdentification QTLs Controlling Genes for Se Uptake in Lentil Seeds
AuthorsAtes D, Sever T, Aldemir S, Yagmur B, Temel HY, Kaya HB, Alsaleh A, Kahraman A, Ozkan H, Vandenberg A, Tanyolac B
TypeJournal Article
Journal NamePlos 1
VolumeMarch 2016
Year2016
CitationAtes D, Sever T, Aldemir S, Yagmur B, Temel HY, Kaya HB, Alsaleh A, Kahraman A, Ozkan H, Vandenberg A, Tanyolac B. Identification QTLs Controlling Genes for Se Uptake in Lentil Seeds. 2016; March 2016.

Abstract

Article Authors Metrics Comments Related Content Correction Abstract Introduction Materials and Methods Results Discussion Supporting Information Acknowledgments Author Contributions References Reader Comments (1) Media Coverage (0) Figures Correction 14 Apr 2016: Ates D, Sever T, Aldemir S, Yagmur B, Temel HY, et al. (2016) Correction: Identification QTLs Controlling Genes for Se Uptake in Lentil Seeds. doi: info:doi/10.1371/journal.pone.0154054 View correction Abstract Lentil (Lens culinaris Medik.) is an excellent source of protein and carbohydrates and is also rich in essential trace elements for the human diet. Selenium (Se) is an essential micronutrient for human health and nutrition, providing protection against several diseases and regulating important biological systems. Dietary intake of 55 μg of Se per day is recommended for adults, with inadequate Se intake causing significant health problems. The objective of this study was to identify and map quantitative trait loci (QTL) of genes controlling Se accumulation in lentil seeds using a population of 96 recombinant inbred lines (RILs) developed from the cross “PI 320937” × “Eston” grown in three different environments for two years (2012 and 2013). Se concentration in seed varied between 119 and 883 μg/kg. A linkage map consisting of 1,784 markers (4 SSRs, and 1,780 SNPs) was developed. The map spanned a total length of 4,060.6 cM, consisting of 7 linkage groups (LGs) with an average distance of 2.3 cM between adjacent markers. Four QTL regions and 36 putative QTL markers, with LOD scores ranging from 3.00 to 4.97, distributed across two linkage groups (LG2 and LG5) were associated with seed Se concentration, explaining 6.3–16.9% of the phenotypic variation.
Features
This publication contains information about 1,760 features:
Feature NameUniquenameType
SNPT128SNPT128genetic_marker
SNPT3308SNPT3308genetic_marker
SNPT3307SNPT3307genetic_marker
SNPT1582SNPT1582genetic_marker
SNPT1798SNPT1798genetic_marker
SNPT1797SNPT1797genetic_marker
SNPT1318SNPT1318genetic_marker
SNPT543SNPT543genetic_marker
SNPT1317SNPT1317genetic_marker
SNPT1302SNPT1302genetic_marker
SNPT882SNPT882genetic_marker
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SNPT662SNPT662genetic_marker
SNPT1316SNPT1316genetic_marker
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SNPT4695SNPT4695genetic_marker
SNPT2400SNPT2400genetic_marker
SNPT218SNPT218genetic_marker
SNPT440SNPT440genetic_marker
SNPT105SNPT105genetic_marker
SNPT549SNPT549genetic_marker

Pages

Projects
This publication contains information about 1 projects:
Project NameDescription
Lentil-QTL_Se_Uptake-Ates-2016
Featuremaps
This publication contains information about 1 maps:
Map Name
Lentil-PI 320937_x_Eston-RIL
Stocks
This publication contains information about 3 stocks:
Stock NameUniquenameType
PI 320937PI 320937accession
EstonEstonaccession
PI 320937_x_EstonPI 320937_x_Estonpopulation
Properties
Additional details for this publication include:
Property NameValue
DOIhttp://dx.doi.org/10.1371/journal.pone.0149210
URLhttp://journals.plos.org/plosone/article?id=10.1371/journal.pone.0149210