Identification QTLs Controlling Genes for Se Uptake in Lentil Seeds

Publication Overview
TitleIdentification QTLs Controlling Genes for Se Uptake in Lentil Seeds
AuthorsAtes D, Sever T, Aldemir S, Yagmur B, Temel HY, Kaya HB, Alsaleh A, Kahraman A, Ozkan H, Vandenberg A, Tanyolac B
TypeJournal Article
Journal NamePlos 1
VolumeMarch 2016
Year2016
CitationAtes D, Sever T, Aldemir S, Yagmur B, Temel HY, Kaya HB, Alsaleh A, Kahraman A, Ozkan H, Vandenberg A, Tanyolac B. Identification QTLs Controlling Genes for Se Uptake in Lentil Seeds. 2016; March 2016.

Abstract

Article Authors Metrics Comments Related Content Correction Abstract Introduction Materials and Methods Results Discussion Supporting Information Acknowledgments Author Contributions References Reader Comments (1) Media Coverage (0) Figures Correction 14 Apr 2016: Ates D, Sever T, Aldemir S, Yagmur B, Temel HY, et al. (2016) Correction: Identification QTLs Controlling Genes for Se Uptake in Lentil Seeds. doi: info:doi/10.1371/journal.pone.0154054 View correction Abstract Lentil (Lens culinaris Medik.) is an excellent source of protein and carbohydrates and is also rich in essential trace elements for the human diet. Selenium (Se) is an essential micronutrient for human health and nutrition, providing protection against several diseases and regulating important biological systems. Dietary intake of 55 μg of Se per day is recommended for adults, with inadequate Se intake causing significant health problems. The objective of this study was to identify and map quantitative trait loci (QTL) of genes controlling Se accumulation in lentil seeds using a population of 96 recombinant inbred lines (RILs) developed from the cross “PI 320937” × “Eston” grown in three different environments for two years (2012 and 2013). Se concentration in seed varied between 119 and 883 μg/kg. A linkage map consisting of 1,784 markers (4 SSRs, and 1,780 SNPs) was developed. The map spanned a total length of 4,060.6 cM, consisting of 7 linkage groups (LGs) with an average distance of 2.3 cM between adjacent markers. Four QTL regions and 36 putative QTL markers, with LOD scores ranging from 3.00 to 4.97, distributed across two linkage groups (LG2 and LG5) were associated with seed Se concentration, explaining 6.3–16.9% of the phenotypic variation.
Features
This publication contains information about 1,760 features:
Feature NameUniquenameType
SNPT810SNPT810genetic_marker
SNPT3642SNPT3642genetic_marker
SNPT3641SNPT3641genetic_marker
SNPT4466SNPT4466genetic_marker
SNPT4465SNPT4465genetic_marker
SNPT106SNPT106genetic_marker
SNPT2513SNPT2513genetic_marker
SNPT2340SNPT2340genetic_marker
SNPT2837SNPT2837genetic_marker
SNPT1890SNPT1890genetic_marker
SNPT706SNPT706genetic_marker
SNPT2256SNPT2256genetic_marker
SNPT1015SNPT1015genetic_marker
SNPT1916SNPT1916genetic_marker
SNPT1210SNPT1210genetic_marker
SNPT103SNPT103genetic_marker
SNPT2747SNPT2747genetic_marker
SNPT121SNPT121genetic_marker
SNPT3904SNPT3904genetic_marker
SNPT3903SNPT3903genetic_marker
SNPT3266SNPT3266genetic_marker
SNPT1740SNPT1740genetic_marker
SNPT932SNPT932genetic_marker
SNPT3265SNPT3265genetic_marker
SNPT739SNPT739genetic_marker

Pages

Projects
This publication contains information about 1 projects:
Project NameDescription
Lentil-QTL_Se_Uptake-Ates-2016
Featuremaps
This publication contains information about 1 maps:
Map Name
Lentil-PI 320937_x_Eston-RIL
Stocks
This publication contains information about 3 stocks:
Stock NameUniquenameType
PI 320937PI 320937accession
EstonEstonaccession
PI 320937_x_EstonPI 320937_x_Estonpopulation
Properties
Additional details for this publication include:
Property NameValue
DOIhttp://dx.doi.org/10.1371/journal.pone.0149210
URLhttp://journals.plos.org/plosone/article?id=10.1371/journal.pone.0149210