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Marker Overview
| Name | Vu_UCR09-1_0002 |
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | A |
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| 5' Flanking Sequence | CAAAATCCCTCTCTTTGGGTTTCTTTGGCATCTCTTCGAAGAAAACTTTGAGCAGAAACA
AATTCACAATCGGAGAAAGAGTAATCAATGGCGATTGAACACGAAGACGATCTCAAGGAC
GAGAAGAACCCTCGACCTCTCGACGAGGATGACATAGCTCTCCTCAAAACATATGGTTTG
GGACCTTACTCCACAAGCATAAAAAAGGTAGAGAAGGAAATTAAAGACATGGCTAAGAAA
GTCAATGACTTATGTGGAATCAAGGAGTCTGATACTGGTTTAGCTGCACCAAGCCAGTGG
GATCTTGTTTCTGATAAGCAAATGATGCAGGAGGAGCAGCCTCTTCAGGTGGCACGATGC
ACCAAGATTATAAATCCAAACTCTGAAGATGCTAAATATGTTATCAATGTGAAGCAAATT
GCAAAGTTTGTTGTTGGGCTGGGAGACAAGGTTTCCCCCACTGACATAGAGGAAGGGATG
CGTGTTGGGGTTGATAGAAACAAATATCAGATTCAGATACCTTTGCCTCCAAAAATTGAT
CCAAGTGTCACCATGATGACAGTTGAAGAGAAGCCAGATGTGACATATAATGATGTTGGT
GGATGTAAGGAGCAGATTGAAAAGATGCGTGAGGTTGTTGAACTTCCCATGCTTCATCCT
GAGAAATTCGTCAAGCTTGGGATTGATCCTCCAAAGGGTGTTCTTTGTTATGGTCCCCCA
GGAACTGGTAAAACACTTTTGGCCAGGGCTGTGGCTAATAGAACTGATGCCTGTTTTATT
AGAGTTATTGGAAGTGAGCTAGTTCAGAAATATGTTGGTGAGGGGGCTAGGATGGTTCGC
GAACTATTTCAGATGGCTCGTTCAAAGAAGGCATGTATTGTGTTTTTTGATGAAGTTGAT
GCAATTGGAGGTGCACGATTTGATGATGGTGTTGGTGGTGATAACGAGGTTCAACGCACC
ATGCTTGAAATTGTGAATCAGCTTGATGGATTTGATGCTCGTGGAAACATCAAAGTTTTG
ATGGCAACAAACAGGCCTGACACTCTAGATCCGGCACTACTACGACCTGGGCGATTGGAC
CGTAAAGTTGAATTTGGCCTTCCTGATTTAGAGAGTAGGACACAGATATTCAAGATACAC
ACGAGAACCATGA |
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| 3' Flanking Sequence | CTGTGAAAGGGATATCCGATTTGAACTTTTGGCTCGGCTTTGCCCAAATTCCACTGGAGC
TGACATAAGGAGTGTATGCACGGAAGCTGGAATGTATGCTATCCGTGCCCGGAGGAAGAC
TGTAACAGAGAAAGACTTCCTTGATGCAGTAAATAAAGTCATCAAAGGATACCAGAAGTT
CAGTGCTACCCCTAAATATATGGTCTACAATTGAGTTATTCTTTCATCATCTTTTCCCCA
GACCATATTAGAACGTACAATCTTTATTTCCTCCGAGAAAAGTGAAGGACGTGTGATTCT
TTATGTGAAACTCCTGTTTGAATGCATCTTGCTTTTCCTTGCTTTTAAAAAAAAAAAAAA
AACAAGTCCTTTTATCCTTTCAAGATTACACTTATTATTAATGGAAGTTTTCGTTACTGG
GGAAAAAAAAAAAAAAAAA |
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| Species | Vigna unguiculata |
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| Publication | [view all] |
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| Contact | Timothy Close
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Publications
| Year | Publication |
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| 2009 | Muchero W, Diop NN, Bhat PR, Fenton RD, Wanamaker S, Pottorff M, Hearne S, Cisse N, Fatokun C, Ehlers JD, Roberts PA, Close TJ. A consensus genetic map of cowpea [Vigna unguiculata (L) Walp.] and synteny based on EST-derived SNPs. Proceedings of the National Academy of Sciences of the United States of America. 2009 Oct 27; 106(43):18159-64. |
Sequence
>Vu_UCR09-1_0002 ID=Vu_UCR09-1_0002; Name=Vu_UCR09-1_0002; organism=Vigna unguiculata; type=genetic_marker; length=1595bp
CAAAATCCCTCTCTTTGGGTTTCTTTGGCATCTCTTCGAAGAAAACTTTG
AGCAGAAACAAATTCACAATCGGAGAAAGAGTAATCAATGGCGATTGAAC
ACGAAGACGATCTCAAGGACGAGAAGAACCCTCGACCTCTCGACGAGGAT
GACATAGCTCTCCTCAAAACATATGGTTTGGGACCTTACTCCACAAGCAT
AAAAAAGGTAGAGAAGGAAATTAAAGACATGGCTAAGAAAGTCAATGACT
TATGTGGAATCAAGGAGTCTGATACTGGTTTAGCTGCACCAAGCCAGTGG
GATCTTGTTTCTGATAAGCAAATGATGCAGGAGGAGCAGCCTCTTCAGGT
GGCACGATGCACCAAGATTATAAATCCAAACTCTGAAGATGCTAAATATG
TTATCAATGTGAAGCAAATTGCAAAGTTTGTTGTTGGGCTGGGAGACAAG
GTTTCCCCCACTGACATAGAGGAAGGGATGCGTGTTGGGGTTGATAGAAA
CAAATATCAGATTCAGATACCTTTGCCTCCAAAAATTGATCCAAGTGTCA
CCATGATGACAGTTGAAGAGAAGCCAGATGTGACATATAATGATGTTGGT
GGATGTAAGGAGCAGATTGAAAAGATGCGTGAGGTTGTTGAACTTCCCAT
GCTTCATCCTGAGAAATTCGTCAAGCTTGGGATTGATCCTCCAAAGGGTG
TTCTTTGTTATGGTCCCCCAGGAACTGGTAAAACACTTTTGGCCAGGGCT
GTGGCTAATAGAACTGATGCCTGTTTTATTAGAGTTATTGGAAGTGAGCT
AGTTCAGAAATATGTTGGTGAGGGGGCTAGGATGGTTCGCGAACTATTTC
AGATGGCTCGTTCAAAGAAGGCATGTATTGTGTTTTTTGATGAAGTTGAT
GCAATTGGAGGTGCACGATTTGATGATGGTGTTGGTGGTGATAACGAGGT
TCAACGCACCATGCTTGAAATTGTGAATCAGCTTGATGGATTTGATGCTC
GTGGAAACATCAAAGTTTTGATGGCAACAAACAGGCCTGACACTCTAGAT
CCGGCACTACTACGACCTGGGCGATTGGACCGTAAAGTTGAATTTGGCCT
TCCTGATTTAGAGAGTAGGACACAGATATTCAAGATACACACGAGAACCA
TGA[A]CTGTGAAAGGGATATCCGATTTGAACTTTTGGCTCGGCTTTGCC
CAAATTCCACTGGAGCTGACATAAGGAGTGTATGCACGGAAGCTGGAATG
TATGCTATCCGTGCCCGGAGGAAGACTGTAACAGAGAAAGACTTCCTTGA
TGCAGTAAATAAAGTCATCAAAGGATACCAGAAGTTCAGTGCTACCCCTA
AATATATGGTCTACAATTGAGTTATTCTTTCATCATCTTTTCCCCAGACC
ATATTAGAACGTACAATCTTTATTTCCTCCGAGAAAAGTGAAGGACGTGT
GATTCTTTATGTGAAACTCCTGTTTGAATGCATCTTGCTTTTCCTTGCTT
TTAAAAAAAAAAAAAAAACAAGTCCTTTTATCCTTTCAAGATTACACTTA
TTATTAATGGAAGTTTTCGTTACTGGGGAAAAAAAAAAAAAAAAA
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