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Marker Overview
| Name | Vu_UCR09-1_0005 |
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | A |
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| 5' Flanking Sequence | AGTTTTCAATAATTAATTAATTCCTCTTTGAAAAAAAATATATTGAAGCCATGTCTTCTA
CTGCTGGTAAAGTCATCAAGTGCAGAGCTGCCGTGGCATGGGAACCAGAGAAGCCACTGT
CGATAGAGACGATAGAAGTGGCACCACCTGGGAAAGGAGAAGTGCGTTTGAAAATCCTCT
TCAACTCCCTTTGCCGTACTGATGTTTACTGGTGGGATGTTAAGGGTCAGAATCCGCTGT
TTCCTCGTATATTAGGTCATGAAGCTTCAGGGATTGTGGAGAGCGTGGGTGAGGGTGTGA
CCGATCTGAAACCAGGAGATCATGCACTCCCAATATTCACTGGGGAGTGTGGAGAATGCA
AATATTGCAAATCAGAAGAGAGCAACCTCTGTGAGCTGCTAAGGATCAACAGTGACAGAG
GAGTTATGCTCAGTGATGGCAAAACAAGGTTCTCCAAAAATGGACAACCCATTTACCACT
TTCTTGGAACTTCCACATTCAGTGAATACACTGTTCTTCATGCTGGCTGTGTTGCCAAGA
TCAACCCTGCTGCCCCACTTGACAAAGTTTGTGTTGTCAGTTGCGGATTTTGCACAGGTT
TTGGTGCTACTGTCAATGTTGCAAAACCGAAGCCTAATGATACTGTTGCTGTCTTTGGTT
TAGGAGCTGTTGGTCTTTCTGCCTGTGAAGGAGCAAGGGTTTCTGGTGCATCGAGAATCA
TTGGGGTTGATCTACTTTCCAGTCGATTTGAACAAGCCAAAAAATTTGGGGTCACTGACT
TTGTGAACCCCAAAGAGCACAACAAACCAGTTCAACAGGTAATTGCTGAAATGACTGGTG
GAGGAGTAGATCGTGCTGTTGAATGCACTGGAAGCATCCAAGCTTCGATCTCAGCATTTG
AATGCACTCATGATGGTTGGGGTGTTGCTGTGCTTGTTAGTGTTCCACACAAGGATGCTG
AATTCAAAACTCATCCCATGAAGTTCATGGAAGGAAGAACTCTGAAGGGTACCTTCTATG
GCCACTTCAAACCCCGCACTGATATTCCTGGTGTTGTGGAGAAGTACCTCAACAAGGAGC
TGGAACTGGAGA |
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| 3' Flanking Sequence | ACTTATCACTCACAGTGTGCCATTCTCAGAGATCAACACAGCATTTGATCTTATGCTGAA
AGGGGAGGGAATAAGGTGTCTGATCCGCATGGAAGAGTGAAGGAGTTATGTTCTCTGGTG
TGAGAACAGTGTTTGTCTTTGATGTGAAAAAAGAGAGTTGTTGGAGAATAAATTTGGCAC
GTAATTCAGTTGTTGAATCTGTGCTATATGTGAGTGTGTAAAGTGGTAATGGAGGTGATG
ACTTTCTTGGTCATCGTCCTGCTTCTGTCACTTCTTTTGCGAATGGTGTGTCTTGTAACT
TTCTTCTGTTTTCTGCAATATATTTATATCTATATTTTCCTTTAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAATAAAAAAAAAAAAAAAAA |
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| Species | Vigna unguiculata |
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| Publication | [view all] |
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| Contact | Timothy Close
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Publications
| Year | Publication |
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| 2009 | Muchero W, Diop NN, Bhat PR, Fenton RD, Wanamaker S, Pottorff M, Hearne S, Cisse N, Fatokun C, Ehlers JD, Roberts PA, Close TJ. A consensus genetic map of cowpea [Vigna unguiculata (L) Walp.] and synteny based on EST-derived SNPs. Proceedings of the National Academy of Sciences of the United States of America. 2009 Oct 27; 106(43):18159-64. |
Sequence
>Vu_UCR09-1_0005 ID=Vu_UCR09-1_0005; Name=Vu_UCR09-1_0005; organism=Vigna unguiculata; type=genetic_marker; length=1486bp
AGTTTTCAATAATTAATTAATTCCTCTTTGAAAAAAAATATATTGAAGCC
ATGTCTTCTACTGCTGGTAAAGTCATCAAGTGCAGAGCTGCCGTGGCATG
GGAACCAGAGAAGCCACTGTCGATAGAGACGATAGAAGTGGCACCACCTG
GGAAAGGAGAAGTGCGTTTGAAAATCCTCTTCAACTCCCTTTGCCGTACT
GATGTTTACTGGTGGGATGTTAAGGGTCAGAATCCGCTGTTTCCTCGTAT
ATTAGGTCATGAAGCTTCAGGGATTGTGGAGAGCGTGGGTGAGGGTGTGA
CCGATCTGAAACCAGGAGATCATGCACTCCCAATATTCACTGGGGAGTGT
GGAGAATGCAAATATTGCAAATCAGAAGAGAGCAACCTCTGTGAGCTGCT
AAGGATCAACAGTGACAGAGGAGTTATGCTCAGTGATGGCAAAACAAGGT
TCTCCAAAAATGGACAACCCATTTACCACTTTCTTGGAACTTCCACATTC
AGTGAATACACTGTTCTTCATGCTGGCTGTGTTGCCAAGATCAACCCTGC
TGCCCCACTTGACAAAGTTTGTGTTGTCAGTTGCGGATTTTGCACAGGTT
TTGGTGCTACTGTCAATGTTGCAAAACCGAAGCCTAATGATACTGTTGCT
GTCTTTGGTTTAGGAGCTGTTGGTCTTTCTGCCTGTGAAGGAGCAAGGGT
TTCTGGTGCATCGAGAATCATTGGGGTTGATCTACTTTCCAGTCGATTTG
AACAAGCCAAAAAATTTGGGGTCACTGACTTTGTGAACCCCAAAGAGCAC
AACAAACCAGTTCAACAGGTAATTGCTGAAATGACTGGTGGAGGAGTAGA
TCGTGCTGTTGAATGCACTGGAAGCATCCAAGCTTCGATCTCAGCATTTG
AATGCACTCATGATGGTTGGGGTGTTGCTGTGCTTGTTAGTGTTCCACAC
AAGGATGCTGAATTCAAAACTCATCCCATGAAGTTCATGGAAGGAAGAAC
TCTGAAGGGTACCTTCTATGGCCACTTCAAACCCCGCACTGATATTCCTG
GTGTTGTGGAGAAGTACCTCAACAAGGAGCTGGAACTGGAGA[A]ACTTA
TCACTCACAGTGTGCCATTCTCAGAGATCAACACAGCATTTGATCTTATG
CTGAAAGGGGAGGGAATAAGGTGTCTGATCCGCATGGAAGAGTGAAGGAG
TTATGTTCTCTGGTGTGAGAACAGTGTTTGTCTTTGATGTGAAAAAAGAG
AGTTGTTGGAGAATAAATTTGGCACGTAATTCAGTTGTTGAATCTGTGCT
ATATGTGAGTGTGTAAAGTGGTAATGGAGGTGATGACTTTCTTGGTCATC
GTCCTGCTTCTGTCACTTCTTTTGCGAATGGTGTGTCTTGTAACTTTCTT
CTGTTTTCTGCAATATATTTATATCTATATTTTCCTTTAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAA
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