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Marker Overview
| Name | Vu_UCR09-1_0009 |
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | C |
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| 5' Flanking Sequence | GTAGGGTTTTAGTTCAGTGCATCTCTATCCGGGACTTTGTTCGCCGTAGCAGCAGGAGCA
GTCTCAGGATGTCTCACAGGAAGTTCGAACACCCAAGGCACGGGTCTCTGGGATTTCTCC
CCAGGAAGCGTGCTTCTCGTCACAGGGGAAAAGTGAAGGCATTCCCTAAGGATGATCCAT
CCAAGTCACCCAAGTTGACTGCATTCTTGGGTTACAAGGCTGGTATGACTCACATTGTTA
GAGAGGTCGAGAAGCCAGGATCAAAGCTTCACAAGAAGGAAACTTGTGAGCCTGTTACAA
TCATTGAGACCCCTCCAATGGTTGTTGTTGGTGTCGTGGGTTATGTGAAAACTCCACGTG
GTCTTCGAACCTTGAACACCGTCTGGGCTCAGCACTTGAGCGAGGAACTGAAGCGTAGGT
TCTATAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCACCAAGTACTCAAAGCAGTACG
AGACTGACGAGGGGAAGAAGAACATTGAGACTCAGCTGGAGAAACTAAAGAAGTATGCTA
CTGTGATTCGTGTTTTGGCTCACACCCAGATCAGGAAAATGAAAGGTTTGAAGCAGAAGA
AAGCCCATATCATGGAAATTCAGGTTAACGGTGGTTCTATTGCACAGAAGGTGGACTTTG
CGTACAGTTTCTTTGAGAAACAGGTCCCTATTGATGCTGTGTTCCAGAAAGATGAGATGA
TTGACATCATAGGAGTGACAAAGGGTAAGGGTTATGAGGGTGTTGTAACTCGTTGGGGTG
TTACTCGTCTTCCCCGTAAGACTCACAGGGGTTTGAGGAAGGTGGCTTGTATTGGTGCCT
GGCATCCTGCCAGAGTTTCATTCACTGTTGCCAGGGCTGGTCAGAATGGATACCACCACA
GGACTGAGTTGAACAAGAAGGTTTATAAGCTTGGTAAAGCTGGGGACGAGTCTCACACTG
CTCTTACCGAGTTCGATAGGACTGAGAAAGACATTACCCCCATGGGTGGTTTCCCTCACT
ATGGTATTGTGAAGGACGATTTCATCATGGTGAAAGGATGCTGTGTTGGGCCCAAGAAAA
GGGTTCTTACATTGCGCCAGTCCCTGCTTAAGCAGACTTCTCGTGTCGCCCTTGAGGAGA
TCAAGCTCAAGTTTATCGATACCTCCTCAAAGTTCGGACACGGTCGCTT |
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| 3' Flanking Sequence | CAGACCACACAGGAGAAGCAGAAGTTCTTTGGACGCCTCAAGGCATAATTATGATAATCG
GATGGAAATGCGGGAACTACCCTCTAGAATTCTATTTGGTTTCCATCGTCCTTTTAAACA
TTGTAGTATTTCCTTTTTTGCATTATGGATTGGTAGCGAGTTTTTTCCTTCTTAATTTCG
CTAAACTTTTTGTTTCAAGGGAGATTTATCGATTAAAAACGTTTCAAATTTTGTTTATGA
TTTTAATTAAAAAATGTCCCAGTTTAAATGGTTTGCATAAAAAAAAAAAAAAAAAAATTG
TTTATGATTTTATTTATATAATGTCC |
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| Species | Vigna unguiculata |
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| Publication | [view all] |
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| Contact | Timothy Close
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Publications
| Year | Publication |
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| 2009 | Muchero W, Diop NN, Bhat PR, Fenton RD, Wanamaker S, Pottorff M, Hearne S, Cisse N, Fatokun C, Ehlers JD, Roberts PA, Close TJ. A consensus genetic map of cowpea [Vigna unguiculata (L) Walp.] and synteny based on EST-derived SNPs. Proceedings of the National Academy of Sciences of the United States of America. 2009 Oct 27; 106(43):18159-64. |
Sequence
>Vu_UCR09-1_0009 ID=Vu_UCR09-1_0009; Name=Vu_UCR09-1_0009; organism=Vigna unguiculata; type=genetic_marker; length=1518bp
GTAGGGTTTTAGTTCAGTGCATCTCTATCCGGGACTTTGTTCGCCGTAGC
AGCAGGAGCAGTCTCAGGATGTCTCACAGGAAGTTCGAACACCCAAGGCA
CGGGTCTCTGGGATTTCTCCCCAGGAAGCGTGCTTCTCGTCACAGGGGAA
AAGTGAAGGCATTCCCTAAGGATGATCCATCCAAGTCACCCAAGTTGACT
GCATTCTTGGGTTACAAGGCTGGTATGACTCACATTGTTAGAGAGGTCGA
GAAGCCAGGATCAAAGCTTCACAAGAAGGAAACTTGTGAGCCTGTTACAA
TCATTGAGACCCCTCCAATGGTTGTTGTTGGTGTCGTGGGTTATGTGAAA
ACTCCACGTGGTCTTCGAACCTTGAACACCGTCTGGGCTCAGCACTTGAG
CGAGGAACTGAAGCGTAGGTTCTATAAGAACTGGTGCAAGTCCAAGAAGA
AGGCTTTCACCAAGTACTCAAAGCAGTACGAGACTGACGAGGGGAAGAAG
AACATTGAGACTCAGCTGGAGAAACTAAAGAAGTATGCTACTGTGATTCG
TGTTTTGGCTCACACCCAGATCAGGAAAATGAAAGGTTTGAAGCAGAAGA
AAGCCCATATCATGGAAATTCAGGTTAACGGTGGTTCTATTGCACAGAAG
GTGGACTTTGCGTACAGTTTCTTTGAGAAACAGGTCCCTATTGATGCTGT
GTTCCAGAAAGATGAGATGATTGACATCATAGGAGTGACAAAGGGTAAGG
GTTATGAGGGTGTTGTAACTCGTTGGGGTGTTACTCGTCTTCCCCGTAAG
ACTCACAGGGGTTTGAGGAAGGTGGCTTGTATTGGTGCCTGGCATCCTGC
CAGAGTTTCATTCACTGTTGCCAGGGCTGGTCAGAATGGATACCACCACA
GGACTGAGTTGAACAAGAAGGTTTATAAGCTTGGTAAAGCTGGGGACGAG
TCTCACACTGCTCTTACCGAGTTCGATAGGACTGAGAAAGACATTACCCC
CATGGGTGGTTTCCCTCACTATGGTATTGTGAAGGACGATTTCATCATGG
TGAAAGGATGCTGTGTTGGGCCCAAGAAAAGGGTTCTTACATTGCGCCAG
TCCCTGCTTAAGCAGACTTCTCGTGTCGCCCTTGAGGAGATCAAGCTCAA
GTTTATCGATACCTCCTCAAAGTTCGGACACGGTCGCTT[C]CAGACCAC
ACAGGAGAAGCAGAAGTTCTTTGGACGCCTCAAGGCATAATTATGATAAT
CGGATGGAAATGCGGGAACTACCCTCTAGAATTCTATTTGGTTTCCATCG
TCCTTTTAAACATTGTAGTATTTCCTTTTTTGCATTATGGATTGGTAGCG
AGTTTTTTCCTTCTTAATTTCGCTAAACTTTTTGTTTCAAGGGAGATTTA
TCGATTAAAAACGTTTCAAATTTTGTTTATGATTTTAATTAAAAAATGTC
CCAGTTTAAATGGTTTGCATAAAAAAAAAAAAAAAAAAATTGTTTATGAT
TTTATTTATATAATGTCC
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