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Marker Overview
| Name | Vu_UCR09-1_0010 |
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | G |
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| 5' Flanking Sequence | ACTCATCTCCCACTTTTGGTTCATGCAACCATTCTCCACTCTGTATAAATTCAACACTCT
CCTACGCTTTTGTTCAACCATTCACTGCACAACTCATTCTGCCATTCATTGCATTATTGC
AGATAAGACCAACCCTTTTCCCTTCAGTTCTTTGTCAAGATGGCATCAGTGCATGCTAAT
GTGACATCACTTGTTTGCAAGAATGGCAACCATGCTTCTCAATCGAAATTCCCAAGTTCT
ACATTCTTACCTGGATTTGATGTTGTTGGACGTGTTTCAAGTGCTTGGAAGAAGGAACTT
GTTCCATCTTCTATGACCTTGGTACCTAGAGCCACATTAACATTTGATCCTCCAGCTACC
AATGCAGACAAAACCAAACAAACGAAGCACACTATTGACCCTGCTTCTCCTGATTTTCTT
CCCCTTCCTTCCTTTGAACAGTGCTTTCCAAAGAGCACTAAAGAACACAGGGAAGTCATT
CATGAAGAAACTGGTCATGTGCTCAAAGTTCCCTTTCGTAGAGTTCACCTCTCTGGGGAG
GAAGGACACTTTGATACCTATGACACTAGTGGTCCCCAAAATATCAACCCGAGGATAGGA
CTCCCAAAATTGCGTGAAGAGTGGGTTGATAGGAGGCAGAAAATAGGTCCACCAAGATTC
ACTCAGATGTACTATGCCAAGCAGGGAATTATCACTGAGGAGATGCTTTATTGTGCTGCT
CGTGAGAAGCTTGACCCAGAGTTTGTGAGGTCAGAAGTTGCTCGTGGACGTGCTATCATT
CCTTCCAACAAAAAACACTTGGAGTTAGAGCCCATGATTGTTGGAAGAAACTTTTTGGTG
AAAGTAAATGCCAACATTGGAAATTCTGCGGTTGCAAGCTCCATAGAAGAGGAGGTTTAC
AAGGTTCAGTGGGCAACTATGTGGGGAGCTGATACAGTCATGGATCTCTCAACTGGTCGC
CACATCCACGAAACTCGAGAGTGGATCTTACGCAACTCCTCTGTACCAGTTGGAACTGTA
CCTATTTATCAAGCACTTGAAAAGGTTAATGGAATTGCTGAAAATCTTACCTGGGAGGTT
TTCAGGGAAACCCTGATTGAACAAGCTGAACAGGGTGTAGATTACTTCACCATCCATGCT
GGAGTTCTTCTGAGATATATTCCATTAACAGCAAAACGCATGACAGGAATTGTCTCCAGG
GGAGGATCTATTCATGCTAAGTGGTGTTTAGCTTATCATAAAGAGAATTTTGCTTATGAG
CACTGGGATGACATACTTGACATCTGCAATCAGTATGATGTGGCCCTATCCATTGGTGAC
GGTCTAAGACCTGGATCCATCTACGATGCAAATGACACAGCTCAATTTGCTGAACTCTTG
ACTCAAGGAGAACTGACCCGTAGGGCATGGGAAAAGGATGTGCAGGTGATGAATGAAGGA
CCTGGACATATCCCAATGCACAAGATTCCTGAAAACATGCAGAAACAGTTAGAATGGTGT
AATGAAGCACCTTTTTACACTCTTGGTCCTTTAACAACTGATATTGCTCCTGGCTATGAT
CACATTACCTCTGCAATCGGTGCTGCAAATATTGGGGCACTTGGTACAGCGCTTCTCTGT
TATGTGACTCCAAAAGAACACCTTGGGTTGCCAAACCGGGATGATGTTAAGGCTGGAGTG
ATAGCTTACAAGATAGCAGCTCATGCAGCTGATTTAGCCAAAGGTCACCCACATGCTCAG
GCCTGGGATGATGCATTAAGCAAGGCAAGATTTGAATTTCGATGGATGGACCAGTTTGCT
TTGTCGTTGGATCCAATGACAGCCATGTCCTTCCATGATGAAACCTTGCCATCAGATGGT
GCGAAAGTGGCCCATTTCTGTTCAATGTGTGGCCCTAAATTCTGCTCTATGAAGATAACA
GAAGATGTGAGAAAGTATGCTGAGAAATATGGATATGGAACTGCTGAGGAA |
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| 3' Flanking Sequence | CTTTGCTGCGTGGGATGGATGCTATGAGTGCTGAATTTCAAGCTGCCAAGAAAACTATCA
GTGGGGAGCAACATGGTGAAGCTGGTGGAGAGATTTACTTGCCAGAAGATTACGTAAACT
CCAAGGAGAGGACTGCATAAATGGAGTGAATCATTTGGAAGAACATGGAGCTAGCTTCCC
AGCTGGCATCTCAGGGTGGGAATGCATTTTCAAGCAGTAGGAGTAGGCGAATAAGTTCTG
TTTGTAGACAGCGTTTATGAACTTCATCTTTAGTCAACTTTTGTTTTGTTATCCAATTCT
CAGCAATGAATTTCTCTAGTATCTTGTTGAAAAAAAAAAAAAAAAAAAAAAA |
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| Species | Vigna unguiculata |
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| Publication | [view all] |
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| Contact | Timothy Close
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Publications
| Year | Publication |
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| 2009 | Muchero W, Diop NN, Bhat PR, Fenton RD, Wanamaker S, Pottorff M, Hearne S, Cisse N, Fatokun C, Ehlers JD, Roberts PA, Close TJ. A consensus genetic map of cowpea [Vigna unguiculata (L) Walp.] and synteny based on EST-derived SNPs. Proceedings of the National Academy of Sciences of the United States of America. 2009 Oct 27; 106(43):18159-64. |
Sequence
>Vu_UCR09-1_0010 ID=Vu_UCR09-1_0010; Name=Vu_UCR09-1_0010; organism=Vigna unguiculata; type=genetic_marker; length=2326bp
ACTCATCTCCCACTTTTGGTTCATGCAACCATTCTCCACTCTGTATAAAT
TCAACACTCTCCTACGCTTTTGTTCAACCATTCACTGCACAACTCATTCT
GCCATTCATTGCATTATTGCAGATAAGACCAACCCTTTTCCCTTCAGTTC
TTTGTCAAGATGGCATCAGTGCATGCTAATGTGACATCACTTGTTTGCAA
GAATGGCAACCATGCTTCTCAATCGAAATTCCCAAGTTCTACATTCTTAC
CTGGATTTGATGTTGTTGGACGTGTTTCAAGTGCTTGGAAGAAGGAACTT
GTTCCATCTTCTATGACCTTGGTACCTAGAGCCACATTAACATTTGATCC
TCCAGCTACCAATGCAGACAAAACCAAACAAACGAAGCACACTATTGACC
CTGCTTCTCCTGATTTTCTTCCCCTTCCTTCCTTTGAACAGTGCTTTCCA
AAGAGCACTAAAGAACACAGGGAAGTCATTCATGAAGAAACTGGTCATGT
GCTCAAAGTTCCCTTTCGTAGAGTTCACCTCTCTGGGGAGGAAGGACACT
TTGATACCTATGACACTAGTGGTCCCCAAAATATCAACCCGAGGATAGGA
CTCCCAAAATTGCGTGAAGAGTGGGTTGATAGGAGGCAGAAAATAGGTCC
ACCAAGATTCACTCAGATGTACTATGCCAAGCAGGGAATTATCACTGAGG
AGATGCTTTATTGTGCTGCTCGTGAGAAGCTTGACCCAGAGTTTGTGAGG
TCAGAAGTTGCTCGTGGACGTGCTATCATTCCTTCCAACAAAAAACACTT
GGAGTTAGAGCCCATGATTGTTGGAAGAAACTTTTTGGTGAAAGTAAATG
CCAACATTGGAAATTCTGCGGTTGCAAGCTCCATAGAAGAGGAGGTTTAC
AAGGTTCAGTGGGCAACTATGTGGGGAGCTGATACAGTCATGGATCTCTC
AACTGGTCGCCACATCCACGAAACTCGAGAGTGGATCTTACGCAACTCCT
CTGTACCAGTTGGAACTGTACCTATTTATCAAGCACTTGAAAAGGTTAAT
GGAATTGCTGAAAATCTTACCTGGGAGGTTTTCAGGGAAACCCTGATTGA
ACAAGCTGAACAGGGTGTAGATTACTTCACCATCCATGCTGGAGTTCTTC
TGAGATATATTCCATTAACAGCAAAACGCATGACAGGAATTGTCTCCAGG
GGAGGATCTATTCATGCTAAGTGGTGTTTAGCTTATCATAAAGAGAATTT
TGCTTATGAGCACTGGGATGACATACTTGACATCTGCAATCAGTATGATG
TGGCCCTATCCATTGGTGACGGTCTAAGACCTGGATCCATCTACGATGCA
AATGACACAGCTCAATTTGCTGAACTCTTGACTCAAGGAGAACTGACCCG
TAGGGCATGGGAAAAGGATGTGCAGGTGATGAATGAAGGACCTGGACATA
TCCCAATGCACAAGATTCCTGAAAACATGCAGAAACAGTTAGAATGGTGT
AATGAAGCACCTTTTTACACTCTTGGTCCTTTAACAACTGATATTGCTCC
TGGCTATGATCACATTACCTCTGCAATCGGTGCTGCAAATATTGGGGCAC
TTGGTACAGCGCTTCTCTGTTATGTGACTCCAAAAGAACACCTTGGGTTG
CCAAACCGGGATGATGTTAAGGCTGGAGTGATAGCTTACAAGATAGCAGC
TCATGCAGCTGATTTAGCCAAAGGTCACCCACATGCTCAGGCCTGGGATG
ATGCATTAAGCAAGGCAAGATTTGAATTTCGATGGATGGACCAGTTTGCT
TTGTCGTTGGATCCAATGACAGCCATGTCCTTCCATGATGAAACCTTGCC
ATCAGATGGTGCGAAAGTGGCCCATTTCTGTTCAATGTGTGGCCCTAAAT
TCTGCTCTATGAAGATAACAGAAGATGTGAGAAAGTATGCTGAGAAATAT
GGATATGGAACTGCTGAGGAA[G]CTTTGCTGCGTGGGATGGATGCTATG
AGTGCTGAATTTCAAGCTGCCAAGAAAACTATCAGTGGGGAGCAACATGG
TGAAGCTGGTGGAGAGATTTACTTGCCAGAAGATTACGTAAACTCCAAGG
AGAGGACTGCATAAATGGAGTGAATCATTTGGAAGAACATGGAGCTAGCT
TCCCAGCTGGCATCTCAGGGTGGGAATGCATTTTCAAGCAGTAGGAGTAG
GCGAATAAGTTCTGTTTGTAGACAGCGTTTATGAACTTCATCTTTAGTCA
ACTTTTGTTTTGTTATCCAATTCTCAGCAATGAATTTCTCTAGTATCTTG
TTGAAAAAAAAAAAAAAAAAAAAAAA
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