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Marker Overview
| Name | Vu_UCR09-1_0085 |
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | A |
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| 5' Flanking Sequence | GTACCACTCTCTCTCTCATTTCCCCTCATCACTAGCTCTGCATTTTCTCTCGCTCTTTGC
CTTCCATCACCCTCGCCATTTCCCTTCCCAAGAAATTAGAAGATGGCAGACGCTGAGGAT
ATTCAACCTCTTGTTTGTGACAACGG |
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| 3' Flanking Sequence | ACAGGAATGGTTAAGGCTGGATTTGCTGGAGATGATGCACCACGTGCTGTGTTTCCCAGC
ATTGTCGGTCGTCCTCGTCACACCGGTGTGATGGTTGGCATGGGTCAAAAAGATGCATAC
GTTGGTGATGAGGCTCAGTCCAAGAGGGGTATTTTGACTCTAAAGTACCCAATTGAACAT
GGAATTGTGAGCAATTGGGATGATATGGAAAAGATTTGGCATCATACCTTCTATAACGAG
CTTCGTGTTGCCCCTGAAGAGCATCCAGTTCTGTTGACAGAGGCTCCACTCAACCCAAAG
GCTAACCGTGAGAAGATGACCCAGATCATGTTTGAGACCTTCAACACCCCTGCCATGTAT
GTTGCCATCCAGGCCGTTCTTTCACTGTATGCAAGTGGTCGTACAACTGGTATTGTGTTG
GATTCTGGTGATGGTGTCAGCCACACTGTCCCCATCTATGAGGGTTATGCTCTCCCACAT
GCCATCCTTCGTCTTGATCTGGCCGGTCGCGACCTCACCGATTTCTTGATGAAAATTTTG
ACCGAACGTGGTTATTCTTTCACCACCTCAGCAGAGCGGGAAATTGTAAGGGATGTCAAG
GAAAAGCTGTCCTACATTGCCCTTGACTATGAACAAGAACTGGAGACAGCCAGGACCAGC
TCCTCTGTGGAGAAGAGCTATGAGTTGCCTGATGGACAGATCATCACCATTGGCGATGAG
CGTTTCAGATGTCCAGAGGTTCTCTTCCAACCATCAATGATCGGAATGGAAGCTGCTGGC
ATTCACGAGACAACATACAACTCCATAATGAAGTGCGATGTTGATATCAGGAAGGACCTG
TATGGTAACATTGTTCTCTCAGGAGGAACAACCATGTTCCCTGGCATTGCTGACAGAATG
AGCAAGGAAATTTCTGCATTGGCACCCAGCAGCATGAAGATCAAGGTTGTAGCACCACCT
GAGAGGAAGTACAGTGTCTGGATTGGTGGTTCCATCTTGGCATCTCTCAGCACATTCCAG
CAGATGTGGATTGCAAAGGCAGAATATGATGAGTCTGGTCCATCAATTGTTCACAGAAAG
TGCTTCTAAGGTGTTTTGAGAAATAGGTTTATTGAAGGGAAAGACTACTATGTTGATTTG
TAATCCTTTCATTCTAGCTTTTGTTATCTGTTCATGTTTTTCTCTTTGTTGGAGTGATCA
TTTATTTGCAGAAGGTGAGGAGAGTTGTTTTTGAAAATGGTCCAGTTCTTTTCATGTACT
TTGACAAGTTTTTGACTGGTTCATTCTGCCTTATGAGTTAGCTGGATTATTAAACTACGC
TTGTACCCGTTGTATGCATAATTATAATCCATCATCTTTTCAACTACAAAAAAAAAAAAA
AAAAAAAAAA |
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| Species | Vigna unguiculata |
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| Publication | [view all] |
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| Contact | Timothy Close
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Publications
| Year | Publication |
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| 2009 | Muchero W, Diop NN, Bhat PR, Fenton RD, Wanamaker S, Pottorff M, Hearne S, Cisse N, Fatokun C, Ehlers JD, Roberts PA, Close TJ. A consensus genetic map of cowpea [Vigna unguiculata (L) Walp.] and synteny based on EST-derived SNPs. Proceedings of the National Academy of Sciences of the United States of America. 2009 Oct 27; 106(43):18159-64. |
Sequence
>Vu_UCR09-1_0085 ID=Vu_UCR09-1_0085; Name=Vu_UCR09-1_0085; organism=Vigna unguiculata; type=genetic_marker; length=1539bp
GTACCACTCTCTCTCTCATTTCCCCTCATCACTAGCTCTGCATTTTCTCT
CGCTCTTTGCCTTCCATCACCCTCGCCATTTCCCTTCCCAAGAAATTAGA
AGATGGCAGACGCTGAGGATATTCAACCTCTTGTTTGTGACAACGG[A]A
CAGGAATGGTTAAGGCTGGATTTGCTGGAGATGATGCACCACGTGCTGTG
TTTCCCAGCATTGTCGGTCGTCCTCGTCACACCGGTGTGATGGTTGGCAT
GGGTCAAAAAGATGCATACGTTGGTGATGAGGCTCAGTCCAAGAGGGGTA
TTTTGACTCTAAAGTACCCAATTGAACATGGAATTGTGAGCAATTGGGAT
GATATGGAAAAGATTTGGCATCATACCTTCTATAACGAGCTTCGTGTTGC
CCCTGAAGAGCATCCAGTTCTGTTGACAGAGGCTCCACTCAACCCAAAGG
CTAACCGTGAGAAGATGACCCAGATCATGTTTGAGACCTTCAACACCCCT
GCCATGTATGTTGCCATCCAGGCCGTTCTTTCACTGTATGCAAGTGGTCG
TACAACTGGTATTGTGTTGGATTCTGGTGATGGTGTCAGCCACACTGTCC
CCATCTATGAGGGTTATGCTCTCCCACATGCCATCCTTCGTCTTGATCTG
GCCGGTCGCGACCTCACCGATTTCTTGATGAAAATTTTGACCGAACGTGG
TTATTCTTTCACCACCTCAGCAGAGCGGGAAATTGTAAGGGATGTCAAGG
AAAAGCTGTCCTACATTGCCCTTGACTATGAACAAGAACTGGAGACAGCC
AGGACCAGCTCCTCTGTGGAGAAGAGCTATGAGTTGCCTGATGGACAGAT
CATCACCATTGGCGATGAGCGTTTCAGATGTCCAGAGGTTCTCTTCCAAC
CATCAATGATCGGAATGGAAGCTGCTGGCATTCACGAGACAACATACAAC
TCCATAATGAAGTGCGATGTTGATATCAGGAAGGACCTGTATGGTAACAT
TGTTCTCTCAGGAGGAACAACCATGTTCCCTGGCATTGCTGACAGAATGA
GCAAGGAAATTTCTGCATTGGCACCCAGCAGCATGAAGATCAAGGTTGTA
GCACCACCTGAGAGGAAGTACAGTGTCTGGATTGGTGGTTCCATCTTGGC
ATCTCTCAGCACATTCCAGCAGATGTGGATTGCAAAGGCAGAATATGATG
AGTCTGGTCCATCAATTGTTCACAGAAAGTGCTTCTAAGGTGTTTTGAGA
AATAGGTTTATTGAAGGGAAAGACTACTATGTTGATTTGTAATCCTTTCA
TTCTAGCTTTTGTTATCTGTTCATGTTTTTCTCTTTGTTGGAGTGATCAT
TTATTTGCAGAAGGTGAGGAGAGTTGTTTTTGAAAATGGTCCAGTTCTTT
TCATGTACTTTGACAAGTTTTTGACTGGTTCATTCTGCCTTATGAGTTAG
CTGGATTATTAAACTACGCTTGTACCCGTTGTATGCATAATTATAATCCA
TCATCTTTTCAACTACAAAAAAAAAAAAAAAAAAAAAAA
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