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Marker Overview
| Name | Vu_UCR09-1_0182 |
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | C |
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| 5' Flanking Sequence | GTATCATAATGAGATATCAGAATACTGAGAAGGTCGAAGGTTGTGTTTGATATTCAGCGT
TCAAGGAAAAAAACAGAGAACCAAACAGAGAGCCATGTCAGGAACCTCGAGGCCTCAGTT
TGTTCTGTTTGGTTCTTCCATTGTTCAATTTGGTTTCTTCGGTGATGGTTGGGCTGCTAA
TCTCGCTCACTTGTACGCTCGCAAGGCTGATATAATCAACCGAGGATATGCTGGTTGGAA
TACAAGGCGAGCTCTGCAGGTTCTGGACAAAGTTTTTCCCAAGGATGCTCGTGTACAACC
CTCACTGGTTATTGTCTACTTTGGTGGCAATGATTCTTCGTTCCCTGACCCAACAGGATT
CGGTACTTCTGTGCCTCTCGAAGAGTATCTCGAGAACATGAAGAAGATCATTAACCATCT
CCAGAGCCTCTCGGACACCACTCGCATTATTGTACTCAGTGCTCCTCCCATCAATGATGA
AGCGCTTAACATACAATTTGCAAGAAGCAATGGGAAGCCATCGAGGACCAATGAGACCTG
T |
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| 3' Flanking Sequence | GAGTGTATTCAGAGGCGTGTTTGGAACTGTGTCAGGACATGAACATTAAGGCCGTTGATC
TATGGACTGCTCTTCAGAAAGTGGAAAAATGGCAAGATGCTTGTTTTATCGATGGAATTC
ATTTGTCACCGGTGGGAAACAAGGTGGTGTTCAAAGAGGTGTTGAAGGTGCTGAAAGAGG
CAGATTGGAAGCCTAGTTTGTATTGGAGATCGATGAAAAATGAGTTCGACGAAGATTCGC
CGTATGATCCATTTTTTGATGATGGAAGACCGTACAATAATCTTTCGAACTGGGTCCTCC
CTGACAACGACTACTGGGATTAGAATCATGTATCGTAATTTAGTGAATTGTTTGCAGAAG
CCTTGAAAATAAAGTGCCATCGTAGTTTCCTTGTGTACCATCGTAGAATGGAGGTGGAGT
TCTCTGTGGTTTCTTAGTGTATGAATGTAATGAAGTGTTGCTTGAAGTTTTGCTCTGTTC
TTTAATAAGTGGCTTTAAATAAAGTTGTGTATCTTCTTCCATCAAAAAAAAAAAAAAAAA
ACTGTTGTTTTACCAAGTAAAAAAAAAAAAAAAAA |
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| Species | Vigna unguiculata |
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| Publication | [view all] |
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| Contact | Timothy Close
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Publications
| Year | Publication |
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| 2009 | Muchero W, Diop NN, Bhat PR, Fenton RD, Wanamaker S, Pottorff M, Hearne S, Cisse N, Fatokun C, Ehlers JD, Roberts PA, Close TJ. A consensus genetic map of cowpea [Vigna unguiculata (L) Walp.] and synteny based on EST-derived SNPs. Proceedings of the National Academy of Sciences of the United States of America. 2009 Oct 27; 106(43):18159-64. |
Sequence
>Vu_UCR09-1_0182 ID=Vu_UCR09-1_0182; Name=Vu_UCR09-1_0182; organism=Vigna unguiculata; type=genetic_marker; length=1119bp
GTATCATAATGAGATATCAGAATACTGAGAAGGTCGAAGGTTGTGTTTGA
TATTCAGCGTTCAAGGAAAAAAACAGAGAACCAAACAGAGAGCCATGTCA
GGAACCTCGAGGCCTCAGTTTGTTCTGTTTGGTTCTTCCATTGTTCAATT
TGGTTTCTTCGGTGATGGTTGGGCTGCTAATCTCGCTCACTTGTACGCTC
GCAAGGCTGATATAATCAACCGAGGATATGCTGGTTGGAATACAAGGCGA
GCTCTGCAGGTTCTGGACAAAGTTTTTCCCAAGGATGCTCGTGTACAACC
CTCACTGGTTATTGTCTACTTTGGTGGCAATGATTCTTCGTTCCCTGACC
CAACAGGATTCGGTACTTCTGTGCCTCTCGAAGAGTATCTCGAGAACATG
AAGAAGATCATTAACCATCTCCAGAGCCTCTCGGACACCACTCGCATTAT
TGTACTCAGTGCTCCTCCCATCAATGATGAAGCGCTTAACATACAATTTG
CAAGAAGCAATGGGAAGCCATCGAGGACCAATGAGACCTGT[C]GAGTGT
ATTCAGAGGCGTGTTTGGAACTGTGTCAGGACATGAACATTAAGGCCGTT
GATCTATGGACTGCTCTTCAGAAAGTGGAAAAATGGCAAGATGCTTGTTT
TATCGATGGAATTCATTTGTCACCGGTGGGAAACAAGGTGGTGTTCAAAG
AGGTGTTGAAGGTGCTGAAAGAGGCAGATTGGAAGCCTAGTTTGTATTGG
AGATCGATGAAAAATGAGTTCGACGAAGATTCGCCGTATGATCCATTTTT
TGATGATGGAAGACCGTACAATAATCTTTCGAACTGGGTCCTCCCTGACA
ACGACTACTGGGATTAGAATCATGTATCGTAATTTAGTGAATTGTTTGCA
GAAGCCTTGAAAATAAAGTGCCATCGTAGTTTCCTTGTGTACCATCGTAG
AATGGAGGTGGAGTTCTCTGTGGTTTCTTAGTGTATGAATGTAATGAAGT
GTTGCTTGAAGTTTTGCTCTGTTCTTTAATAAGTGGCTTTAAATAAAGTT
GTGTATCTTCTTCCATCAAAAAAAAAAAAAAAAAACTGTTGTTTTACCAA
GTAAAAAAAAAAAAAAAAA
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