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Marker Overview
| Name | Vu_UCR09-1_0292 |
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | A |
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| 5' Flanking Sequence | GACTAGTCCCAGCCCCTTCTGCCCTCCCCCCTAAAACTGAAAAAAACCTAAAAAACCAAA
AATAATATTTTTTTCAGTTTCTCCGCCGTCAACAACCACCACTACCACCGTTCTATTCTC
CGGCGACCCTATCACTATCCTTTATTCCTATCCCTTACTTACACGGAAGAAGAAGAAGCA
AAGCGAATTACGAAAAAAACTATTCCAAAAAAAAATTTCTGAAGCGGTTAGGGTTTAGTT
TTCTATCAGTTTTTTTCGTGTATCGATTTTGTCTGTTTGTGAGATGGCGCAGATTCAGGC
ACCGCAGCATCAGAGTCCAGTTTCGGCTCCCCCAAACGGCGTCGCACCAGCGCCAAACTC
GAACCAGTTCGTGACGACGTCGTTGTACGTAGGCGATCTTGACCAGAATGTCAACGACTC
GCAGCTCTACGATCTGTTCAACCAGGTCGGACAAGTCGTTTCGGTTCGTGTTTGCAGGGA
CTTGACAACGCGTCGTTCACTCGGCTATGGCTATGTCAATTACAGTAGTCCTCAGGATGC
GGCGAGGGCATTGGATGTACTGAATTTCACTCCACTGAACAACAAATCTATTAGGATCAT
GTATTCTCATCGGGATCCTAGTATTCGGAAGAGTGGTACTGCGAATATTTTTATCAAGAA
TTTGGATAAGGCTATTGACCACAAGGCCTTGCATGATACTTTTTCTTCTTTTGGACACAT
TCTTTCTTGCAAAATAGCAACTGATGGTTCTGGCCTGTCTAAAGGTTATGGATTTGTTCA
ATTTGACAATGAAGAGTCTGCACAGAATGCTATTGACAAGTTAAACGGCATGCTGATCAA
TGATAAGCAGGTCTATGTAGGTCCTTTCCTGCGAAAGCAAGATAGAGAGAATGCTCTCAG
TAAGACAAAATTCAATAATGTCTATGTGAAAAACCTATCAGATTCAACCACAGATGAAGA
GTTGAAGAAAATTTTTGGAGAATATGGTACCATTACTAGTGCTGTAGTAATGAGAGATGC
GGATGGTAAATCTAAGTGTTTTGGTTTCGTCAATTTTGAAAACCCAGACGATGCTGCCAA
AGCTGTTGAGGGGCTTAATGGGAAGAAATTTGATGAGAAGGATTGGTATGTTGGAAAAGC
CCAGAAAAAATCTGAGCGTGAACTTGAATTGAAAGGAAGGTTTGAGCAGAGTATAAAGGA
AGCTGCTGACAAATTTCAGGGTGTGAACCTGTATCTGAAGAACTTGGATGATACTATTAG
TGATGAAAATCTTAAAGAAATGTTTTCTGAGTTTGGGACAATATCTTCATACAAGGTAAT
GCGAGACCCGAATGGAATTAGTAGAGGATCCGGATTTGTTGCATTTTCAACTCCTGAAGA
AGCATCTCGTGCTCTTGCTGAGATGAATGGTAAAATGATTGCTGGAAAGCCTCTCTATGT
TGCCCTGGCACAGAGGAAAGAAGAGAGAAGAGCAAGGTTACAGGCACAATTTTCACAGAT
GAGGCCTGTTGCAATTACGCCATCTGTGGCACCTCGTATGCCTCTCTATCCTCCTGGTGC
TCCTGGACTAGGACAACAATTTTTGTATGGGCAAGGACCACCAGCCATGATTCCTCCCCA
AGCTGGATTTGGTTACCAGCAGCAGCTAGTTCCTGGAATGAGGCCTGGTGGCGGTCCAAT
GCCTAGCTTCTTTGTTCCTCTGGTTCAGCAGGGACAGCAAGGCCAGCGCCCTGGTGGTCG
CCGTGGAGCAGGTCCTGTTCAACAACCTCAACAGCCAGTGCCAATGATGCAGCAGCAGAT
GCTTCCAAGGGGACGAGTCTATCGTTACCCTCCTGGCCGCAACATGCAAGATGTCCCACT
CCCAGGTGTTGCTGGTGGG |
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| 3' Flanking Sequence | TGATGTCTGTCCCTTACGACATGGGTGGTCTTCCAATCCGTGATGCTGTGGGACAGCCAA
TGCCTATTCAAGCTCTGGCTACGGCCCTTGCAAATGCCCCACCTGAACAGCAGAGGACTA
TGCTGGGTGAAGCTTTATATCCTCTGGTTGATCAGCTGGAACATGACGCTGCAGCAAAGG
TTACTGGCATGCTTTTGGAGATGGACCAGCCTGAAGTGCTTCATCTGATCGAGTCACCGG
ATGCTCTGAAGGCGAAAGTTGCTGAAGCCATGGATGTGTTGAGAAATGTTACTCAGCAGC
AGACCAACCCTGCTGATCAACTTGCCTCACTCTCTCTCAATGACAATCTTGTCTCTTAGA
TTCCGTTGGTCCTTTGACAGGAATCTGCACTTCATTTATTCCTAGCCAGCCACTTTATTT
TCAGCTCTTTAGATATTTCCTTTTAGTCGTTTTCTCTGCTACTTTTTGTTTCTGTTTTTC
CACCATCTCGATTGCTAGGAGTAGAATAACTTGTTGGATTTCTTAGTTTATGCATTTATG
CTTTTTTGCTCGTTTGCATTAAAAAAAAAAAAAAAAATTTCTTTACTCTTTAATTCTTCT
AATCCACTATTTGTTGTCCTCGATATTAAAGGCTAAATAATCTTGGAATTAAAACCAAGA
ACACCAAGACAATTATTGTTTTATAAGAATTGAATTGAACTTTTAAAAAAAAAAAAAAA |
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| Species | Vigna unguiculata |
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| Publication | [view all] |
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| Contact | Timothy Close
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Publications
| Year | Publication |
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| 2009 | Muchero W, Diop NN, Bhat PR, Fenton RD, Wanamaker S, Pottorff M, Hearne S, Cisse N, Fatokun C, Ehlers JD, Roberts PA, Close TJ. A consensus genetic map of cowpea [Vigna unguiculata (L) Walp.] and synteny based on EST-derived SNPs. Proceedings of the National Academy of Sciences of the United States of America. 2009 Oct 27; 106(43):18159-64. |
Sequence
>Vu_UCR09-1_0292 ID=Vu_UCR09-1_0292; Name=Vu_UCR09-1_0292; organism=Vigna unguiculata; type=genetic_marker; length=2601bp
GACTAGTCCCAGCCCCTTCTGCCCTCCCCCCTAAAACTGAAAAAAACCTA
AAAAACCAAAAATAATATTTTTTTCAGTTTCTCCGCCGTCAACAACCACC
ACTACCACCGTTCTATTCTCCGGCGACCCTATCACTATCCTTTATTCCTA
TCCCTTACTTACACGGAAGAAGAAGAAGCAAAGCGAATTACGAAAAAAAC
TATTCCAAAAAAAAATTTCTGAAGCGGTTAGGGTTTAGTTTTCTATCAGT
TTTTTTCGTGTATCGATTTTGTCTGTTTGTGAGATGGCGCAGATTCAGGC
ACCGCAGCATCAGAGTCCAGTTTCGGCTCCCCCAAACGGCGTCGCACCAG
CGCCAAACTCGAACCAGTTCGTGACGACGTCGTTGTACGTAGGCGATCTT
GACCAGAATGTCAACGACTCGCAGCTCTACGATCTGTTCAACCAGGTCGG
ACAAGTCGTTTCGGTTCGTGTTTGCAGGGACTTGACAACGCGTCGTTCAC
TCGGCTATGGCTATGTCAATTACAGTAGTCCTCAGGATGCGGCGAGGGCA
TTGGATGTACTGAATTTCACTCCACTGAACAACAAATCTATTAGGATCAT
GTATTCTCATCGGGATCCTAGTATTCGGAAGAGTGGTACTGCGAATATTT
TTATCAAGAATTTGGATAAGGCTATTGACCACAAGGCCTTGCATGATACT
TTTTCTTCTTTTGGACACATTCTTTCTTGCAAAATAGCAACTGATGGTTC
TGGCCTGTCTAAAGGTTATGGATTTGTTCAATTTGACAATGAAGAGTCTG
CACAGAATGCTATTGACAAGTTAAACGGCATGCTGATCAATGATAAGCAG
GTCTATGTAGGTCCTTTCCTGCGAAAGCAAGATAGAGAGAATGCTCTCAG
TAAGACAAAATTCAATAATGTCTATGTGAAAAACCTATCAGATTCAACCA
CAGATGAAGAGTTGAAGAAAATTTTTGGAGAATATGGTACCATTACTAGT
GCTGTAGTAATGAGAGATGCGGATGGTAAATCTAAGTGTTTTGGTTTCGT
CAATTTTGAAAACCCAGACGATGCTGCCAAAGCTGTTGAGGGGCTTAATG
GGAAGAAATTTGATGAGAAGGATTGGTATGTTGGAAAAGCCCAGAAAAAA
TCTGAGCGTGAACTTGAATTGAAAGGAAGGTTTGAGCAGAGTATAAAGGA
AGCTGCTGACAAATTTCAGGGTGTGAACCTGTATCTGAAGAACTTGGATG
ATACTATTAGTGATGAAAATCTTAAAGAAATGTTTTCTGAGTTTGGGACA
ATATCTTCATACAAGGTAATGCGAGACCCGAATGGAATTAGTAGAGGATC
CGGATTTGTTGCATTTTCAACTCCTGAAGAAGCATCTCGTGCTCTTGCTG
AGATGAATGGTAAAATGATTGCTGGAAAGCCTCTCTATGTTGCCCTGGCA
CAGAGGAAAGAAGAGAGAAGAGCAAGGTTACAGGCACAATTTTCACAGAT
GAGGCCTGTTGCAATTACGCCATCTGTGGCACCTCGTATGCCTCTCTATC
CTCCTGGTGCTCCTGGACTAGGACAACAATTTTTGTATGGGCAAGGACCA
CCAGCCATGATTCCTCCCCAAGCTGGATTTGGTTACCAGCAGCAGCTAGT
TCCTGGAATGAGGCCTGGTGGCGGTCCAATGCCTAGCTTCTTTGTTCCTC
TGGTTCAGCAGGGACAGCAAGGCCAGCGCCCTGGTGGTCGCCGTGGAGCA
GGTCCTGTTCAACAACCTCAACAGCCAGTGCCAATGATGCAGCAGCAGAT
GCTTCCAAGGGGACGAGTCTATCGTTACCCTCCTGGCCGCAACATGCAAG
ATGTCCCACTCCCAGGTGTTGCTGGTGGG[A]TGATGTCTGTCCCTTACG
ACATGGGTGGTCTTCCAATCCGTGATGCTGTGGGACAGCCAATGCCTATT
CAAGCTCTGGCTACGGCCCTTGCAAATGCCCCACCTGAACAGCAGAGGAC
TATGCTGGGTGAAGCTTTATATCCTCTGGTTGATCAGCTGGAACATGACG
CTGCAGCAAAGGTTACTGGCATGCTTTTGGAGATGGACCAGCCTGAAGTG
CTTCATCTGATCGAGTCACCGGATGCTCTGAAGGCGAAAGTTGCTGAAGC
CATGGATGTGTTGAGAAATGTTACTCAGCAGCAGACCAACCCTGCTGATC
AACTTGCCTCACTCTCTCTCAATGACAATCTTGTCTCTTAGATTCCGTTG
GTCCTTTGACAGGAATCTGCACTTCATTTATTCCTAGCCAGCCACTTTAT
TTTCAGCTCTTTAGATATTTCCTTTTAGTCGTTTTCTCTGCTACTTTTTG
TTTCTGTTTTTCCACCATCTCGATTGCTAGGAGTAGAATAACTTGTTGGA
TTTCTTAGTTTATGCATTTATGCTTTTTTGCTCGTTTGCATTAAAAAAAA
AAAAAAAAATTTCTTTACTCTTTAATTCTTCTAATCCACTATTTGTTGTC
CTCGATATTAAAGGCTAAATAATCTTGGAATTAAAACCAAGAACACCAAG
ACAATTATTGTTTTATAAGAATTGAATTGAACTTTTAAAAAAAAAAAAAA
A
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