|
|
Marker Overview
| Name | Vu_UCR09-1_0333 |
|---|
| dbSNP ID | N/A |
|---|
| Type | SNP |
|---|
| SNP Alleles | T |
|---|
| 5' Flanking Sequence | AACATCAAAAACTAACCAAACCAAACCCAATTCACCGTTATTCTTCTCCAATCCCAACAA
AAATGACTGCCACCACAATCCCCCAAGTCACTCTCCACTCTTCCTCCGGCCACCGCAAGA
TGCCGGTCATCGGCCTCGGCACCGCGCCGGAAGCCACCAGCACCGTCACCACAAAAGATG
CTGTTCTCGAGGCCATCAAGCAGGGCTACCGACACTTCGACGCTGCTTCTGCTTATGGCG
TCGAACAGTCCGTCGGAGAAGCCATAGCAGAAGCTCTTAAACTTGGACTCATCGAATCCA
GAGACCAACTCTTCATCACTTCCAAATTGTGGGTCACCGATAACCATGCACAAACCATTG
TTCCAGCTCTCCAGAAATCTCTCAGGACTCTTCAACTGGAGTACTTGGATCTGTATCTGA
TCCACTGGCCCATTGCTACGAAGCCTGGGAAAGTTGTGTACCCGATTGAAGTATCAGAGA
TAGTGGAGTTTGACATGAAGGGTGTGTGGGAATCCATGGAAGAATGCCAGAGACTTGGTC
TCACCAAAGCCATTGGAGTCAGCAACTTCTCCATCAGCAAGCTTGAAAGAT |
|---|
| 3' Flanking Sequence | GCTCTCTTTTGCTACCATTCCTCCTGCAGTGAACCAAGTTGAAGTTAACCTCGGGTGGCA
GCAGCAGCAACTGAGAGAATTCTGCAAGGAAAAGGGTATCACTGTGACTGCTTTTTCACC
CCTGAGAAAGGGTGCTAGCAGAGGTGCTAATCTTGTGATGGATAATGATGTACTTAAAGA
ATTGTCTGATGCTCATGGAAAAACTGTTGCTCAGATTTGTCTTCGATGGCTGTATGAAGA
AGGATTAACCTTTGTGGTGAAGAGCTATGACAAAGATAGGATGAAGCAGAACTTGGGGAT
TTTCGATTGGTCCTTGACTGAAGATGATTACAAGAAGATAGCTGAAATCCATCAAGACAG
GCTCATCAAAGGACCAACCAAGCCTCTTCTTGATGATCTTTGGGAATGAACAATCAATCA
CTTGTTTTCACAGTTTGTGTGTTTGCTTGTTACTTTCTCTCGGAAAAAATAAAGCAAGTA
TCATCATTCTGTCGATGTTGATGATAATAATTAGTCAACCTCTTGTATTCATGAACTGTG
CCAATTTTCTTATAGAGCATATCTACGTTTCATTTCGAATTTCTATAATAAATAAAGCCC
TAAACTTTATCTTAAAAAAAAAAAAAAAAGAATTAAAAAAAAAAAAAAAAA |
|---|
| Species | Vigna unguiculata |
|---|
| Publication | [view all] |
|---|
| Contact | Timothy Close
|
|---|
Publications
| Year | Publication |
|---|
| 2009 | Muchero W, Diop NN, Bhat PR, Fenton RD, Wanamaker S, Pottorff M, Hearne S, Cisse N, Fatokun C, Ehlers JD, Roberts PA, Close TJ. A consensus genetic map of cowpea [Vigna unguiculata (L) Walp.] and synteny based on EST-derived SNPs. Proceedings of the National Academy of Sciences of the United States of America. 2009 Oct 27; 106(43):18159-64. |
Sequence
>Vu_UCR09-1_0333 ID=Vu_UCR09-1_0333; Name=Vu_UCR09-1_0333; organism=Vigna unguiculata; type=genetic_marker; length=1245bp
AACATCAAAAACTAACCAAACCAAACCCAATTCACCGTTATTCTTCTCCA
ATCCCAACAAAAATGACTGCCACCACAATCCCCCAAGTCACTCTCCACTC
TTCCTCCGGCCACCGCAAGATGCCGGTCATCGGCCTCGGCACCGCGCCGG
AAGCCACCAGCACCGTCACCACAAAAGATGCTGTTCTCGAGGCCATCAAG
CAGGGCTACCGACACTTCGACGCTGCTTCTGCTTATGGCGTCGAACAGTC
CGTCGGAGAAGCCATAGCAGAAGCTCTTAAACTTGGACTCATCGAATCCA
GAGACCAACTCTTCATCACTTCCAAATTGTGGGTCACCGATAACCATGCA
CAAACCATTGTTCCAGCTCTCCAGAAATCTCTCAGGACTCTTCAACTGGA
GTACTTGGATCTGTATCTGATCCACTGGCCCATTGCTACGAAGCCTGGGA
AAGTTGTGTACCCGATTGAAGTATCAGAGATAGTGGAGTTTGACATGAAG
GGTGTGTGGGAATCCATGGAAGAATGCCAGAGACTTGGTCTCACCAAAGC
CATTGGAGTCAGCAACTTCTCCATCAGCAAGCTTGAAAGAT[T]GCTCTC
TTTTGCTACCATTCCTCCTGCAGTGAACCAAGTTGAAGTTAACCTCGGGT
GGCAGCAGCAGCAACTGAGAGAATTCTGCAAGGAAAAGGGTATCACTGTG
ACTGCTTTTTCACCCCTGAGAAAGGGTGCTAGCAGAGGTGCTAATCTTGT
GATGGATAATGATGTACTTAAAGAATTGTCTGATGCTCATGGAAAAACTG
TTGCTCAGATTTGTCTTCGATGGCTGTATGAAGAAGGATTAACCTTTGTG
GTGAAGAGCTATGACAAAGATAGGATGAAGCAGAACTTGGGGATTTTCGA
TTGGTCCTTGACTGAAGATGATTACAAGAAGATAGCTGAAATCCATCAAG
ACAGGCTCATCAAAGGACCAACCAAGCCTCTTCTTGATGATCTTTGGGAA
TGAACAATCAATCACTTGTTTTCACAGTTTGTGTGTTTGCTTGTTACTTT
CTCTCGGAAAAAATAAAGCAAGTATCATCATTCTGTCGATGTTGATGATA
ATAATTAGTCAACCTCTTGTATTCATGAACTGTGCCAATTTTCTTATAGA
GCATATCTACGTTTCATTTCGAATTTCTATAATAAATAAAGCCCTAAACT
TTATCTTAAAAAAAAAAAAAAAAGAATTAAAAAAAAAAAAAAAAA
|
