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Marker Overview
| Name | Vu_UCR09-1_0492 |
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | T |
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| 5' Flanking Sequence | GAATCTCACCATTCTTCCTTTCTCTGCGAATTCGATTTACTTTCCAAATCACGAAACTCA
AAAATGGAGAAAGCGATCAACAGACAGAAGATTTTGCTTCATCATCTCAACCCTTCATCA
TCCACCCACGCCAATGAATCATCCTCTCTCTCTGCTTCAGCATGTGCGGCGGGGGATAGT
GCTGCTTATCACAGGACATCTACATTTGGGGACGATGTTGTGATCGTGGCTGCTTATCGA
ACTGCTCTTTGCAAATCTAAGCGTGGTGGTTTCAAAGACACTCATGCTGATGATCTACTG
GCTCCTGTTTTAAAGGCTGTAATTGAGAGAACCAATGTTAACCCAAGTGAAGTTGGGGAT
ATTGTTGTGGGTTCTGTATTGGCTCCTGGATCTCAAAGAGCTAGTGAATGCCGAATGGCT
GCATTTTATGCTGGTTTTCCTGAAACTGTACCTGTTAGGACTGTTAATAGGCAATGTTCG
TCTGGACTCCAGGCTGTTGCTGATGTAGCTGCTGCTATAAGGGCTGGATTCTATGACATT
GGCATTGGTGCTGGTTTGGAATCTATGACAGCGAATCCAATGGCATGGGAAGGATCAGTT
AATCCTAAAGTAAAAATGTTTGAGCAAGCTCAAAACTGTCTTCTTCCAATGGGTATTACC
TCTGAAAATGTTGCAAATCGCTTTGGTGTTTCAAGGAAGGAACAAGATCTGGCTGCAGTT
GAGTCTCATAGACGAGCTGCTGCAGCTACTGCTTCTGGTAGATTTAAAGATGAAATTATC
CCAGTTTCCACCAAGATTGTGGACCCTAAATCTGGTGAGGAGAAACCTGTCACCATTTCT
GTTGATGATGGAATTCGACCTGGGACAACAGTATCTGATCTAGGGAGGCTCAAACCTGTC
TTCAAGAAAGATGGAACCACTACTGCTGGTAATTCTAGCCAGGTGAGTGATGGAGCTGGA
GCTGTTCTGCTTATGAAAAGAAGTATTGCACAGCAAAAGGGCCTACCCATTCTTGGTGTA
TTCAGGACTTTCTCAGCAGTTGGTGTTGATCCTGCAATCATGGGTGTGGGCCCTGCTGCT
GCAATTCCTGTTGCTGTTAAGGCTGCAGGTCTAGAGCTTGATGATATTGATCTGTTTGAA
ATAAATGAGGCATTTGCTTCCCAGTTCGTGTATTGCCGAAACAAGCTAGGACTTGATCCA
GAAAAGATCAATGTTAATGGAGGTGCAATGGCAATTGGGCATCCTCTAGGTGCAACAGGT
GCTCGATGTGTTGCTACACTGTTGCATGAAATGAAGAAACGTGGCAGGGACTGTCGATTT
GGAGTTATA |
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| 3' Flanking Sequence | CTATGTGCATAGGTACTGGAATGGGAGCAGCTGCTGTTTTTGAGAGTGGTGATTGTGCTG
ATGAACTATGCAATGCCCGGAAAGTGGATAATCTTCTTCTATCCAAGGATGCTCGCTAGA
AATACCTTCCTCCTACTTACTAATCAAATAAAAACTACAATAAGGCTTTCTCCTATGCTA
GTGGAAATATCAACCACTGTTCAACAATTTTAAACTTTTCTATTCATAAACCAGAATTGT
TTTGTTATGTGTTTTGTTTAATTATACACACATATATTTTTTTTTTCTCTCCTCAAAAAA
AAAAAAAAAAATTTTACTCTCTCTTCTCTCCCCAATTAGAATGAACAATAATAAACAAGT
GGATCCCGTGTTTTCCCTGTTTAGAAAAGATGCAATGCAGAAGACCTAAACATGTCACAC
TACAAAAAAAAAAAAAAAAA |
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| Species | Vigna unguiculata |
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| Publication | [view all] |
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| Contact | Timothy Close
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Publications
| Year | Publication |
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| 2009 | Muchero W, Diop NN, Bhat PR, Fenton RD, Wanamaker S, Pottorff M, Hearne S, Cisse N, Fatokun C, Ehlers JD, Roberts PA, Close TJ. A consensus genetic map of cowpea [Vigna unguiculata (L) Walp.] and synteny based on EST-derived SNPs. Proceedings of the National Academy of Sciences of the United States of America. 2009 Oct 27; 106(43):18159-64. |
Sequence
>Vu_UCR09-1_0492 ID=Vu_UCR09-1_0492; Name=Vu_UCR09-1_0492; organism=Vigna unguiculata; type=genetic_marker; length=1772bp
GAATCTCACCATTCTTCCTTTCTCTGCGAATTCGATTTACTTTCCAAATC
ACGAAACTCAAAAATGGAGAAAGCGATCAACAGACAGAAGATTTTGCTTC
ATCATCTCAACCCTTCATCATCCACCCACGCCAATGAATCATCCTCTCTC
TCTGCTTCAGCATGTGCGGCGGGGGATAGTGCTGCTTATCACAGGACATC
TACATTTGGGGACGATGTTGTGATCGTGGCTGCTTATCGAACTGCTCTTT
GCAAATCTAAGCGTGGTGGTTTCAAAGACACTCATGCTGATGATCTACTG
GCTCCTGTTTTAAAGGCTGTAATTGAGAGAACCAATGTTAACCCAAGTGA
AGTTGGGGATATTGTTGTGGGTTCTGTATTGGCTCCTGGATCTCAAAGAG
CTAGTGAATGCCGAATGGCTGCATTTTATGCTGGTTTTCCTGAAACTGTA
CCTGTTAGGACTGTTAATAGGCAATGTTCGTCTGGACTCCAGGCTGTTGC
TGATGTAGCTGCTGCTATAAGGGCTGGATTCTATGACATTGGCATTGGTG
CTGGTTTGGAATCTATGACAGCGAATCCAATGGCATGGGAAGGATCAGTT
AATCCTAAAGTAAAAATGTTTGAGCAAGCTCAAAACTGTCTTCTTCCAAT
GGGTATTACCTCTGAAAATGTTGCAAATCGCTTTGGTGTTTCAAGGAAGG
AACAAGATCTGGCTGCAGTTGAGTCTCATAGACGAGCTGCTGCAGCTACT
GCTTCTGGTAGATTTAAAGATGAAATTATCCCAGTTTCCACCAAGATTGT
GGACCCTAAATCTGGTGAGGAGAAACCTGTCACCATTTCTGTTGATGATG
GAATTCGACCTGGGACAACAGTATCTGATCTAGGGAGGCTCAAACCTGTC
TTCAAGAAAGATGGAACCACTACTGCTGGTAATTCTAGCCAGGTGAGTGA
TGGAGCTGGAGCTGTTCTGCTTATGAAAAGAAGTATTGCACAGCAAAAGG
GCCTACCCATTCTTGGTGTATTCAGGACTTTCTCAGCAGTTGGTGTTGAT
CCTGCAATCATGGGTGTGGGCCCTGCTGCTGCAATTCCTGTTGCTGTTAA
GGCTGCAGGTCTAGAGCTTGATGATATTGATCTGTTTGAAATAAATGAGG
CATTTGCTTCCCAGTTCGTGTATTGCCGAAACAAGCTAGGACTTGATCCA
GAAAAGATCAATGTTAATGGAGGTGCAATGGCAATTGGGCATCCTCTAGG
TGCAACAGGTGCTCGATGTGTTGCTACACTGTTGCATGAAATGAAGAAAC
GTGGCAGGGACTGTCGATTTGGAGTTATA[T]CTATGTGCATAGGTACTG
GAATGGGAGCAGCTGCTGTTTTTGAGAGTGGTGATTGTGCTGATGAACTA
TGCAATGCCCGGAAAGTGGATAATCTTCTTCTATCCAAGGATGCTCGCTA
GAAATACCTTCCTCCTACTTACTAATCAAATAAAAACTACAATAAGGCTT
TCTCCTATGCTAGTGGAAATATCAACCACTGTTCAACAATTTTAAACTTT
TCTATTCATAAACCAGAATTGTTTTGTTATGTGTTTTGTTTAATTATACA
CACATATATTTTTTTTTTCTCTCCTCAAAAAAAAAAAAAAAAATTTTACT
CTCTCTTCTCTCCCCAATTAGAATGAACAATAATAAACAAGTGGATCCCG
TGTTTTCCCTGTTTAGAAAAGATGCAATGCAGAAGACCTAAACATGTCAC
ACTACAAAAAAAAAAAAAAAAA
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