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Marker Overview
| Name | Vu_UCR09-1_0512 |
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | C |
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| 5' Flanking Sequence | AAACAGACGCCGAAGCTCGCGCTTTCGCTTGGTCTTACTCAGCAAATGCCTGATATGATT
GAAGAGTTGATCAGCAAAGGGCAGCAGCTTGATGCAGTTCATTTTACATATGAAGTGGGT
CTTGTGGATAAGTTTCCTCCTGTTCCCTTGTTGAAGTCTTTTCTCAAGGATGCTAAGAAA
GTTGCGGCTTCTATTTTGGAAGATCCTAATAATGCAGGCCGAGCAGCGTTGGAAGATAAA
AAAGGGCCGGAAATGTACCTAGCTGCAAGGAAAGAGCAGTCTGCACTCAGGGCTGTGATT
AAATGCATCGAAGAATACAAACTTGAGGCTGATTTCCCTCCAGAAAATCTGAAGAAGCGA
CTTGAACAGTTGGAGAAGGTGAAGACAGTGAAGACCGAGAAAAGGAAACCGGCTGCTGTT
CCTGCCAATAAGAGAACTCGAGCAAGCAACAGCAATGGAGGTCCAATGCCACCAGCCAAA
GCTGGGCGTTTGACTAATGCGTATGTATCATCTTTCCCTGCTGCTCCTACATTTGTTAGG
TCTCCATCACACGGGCAATACCCAGCTGCTCTTCCACCATACCCTTCCCCACCCCACATG
TATGGCAGCAGAAGTCCCCCGGCAAATCCTTATGCTGCTTATTCGCCTGAGCCTGCACCA
GCTATTGCAGGATCTTACCCAGCGGCTCCCATGAACTATCCTGCATATGGTGGCTATGGA
AATGTCTTGGCACCCACTTATCAGCAGGCTTACTACCGATAGAAATGACAACCCTCGAAG
ATGGTAACCACTGATATGACGACCTTGATCAAATTTACTTTCGCAATGTTGTTTGTAATC
ACTAACCGTTTAACGGTAGCAGTTCTGTGTGTTAATTATAACTACTGTCCCACTTCCTGC
TCTGCGTGGGGATAAG |
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| 3' Flanking Sequence | TGTATTTCTAATGTTGATCCCATAGTACTAGGTGATTGTGGAAAGTAACTAGGACGGCCA
AGAAACATCAGAAACTCAACAACCACTGTTCGGTTTAGTTGTAGAAAGACTTACTGTGTT
TACATTATATGCTTATCTTGGGATCGAACTGAAGGAAAACAAAAAAGGAAAAAAGGTAAT
CTGTTTCTTGGCAGCTGTTGACTATGGTATAAAGACTATAAAGGAAATAATTTTGTCTGA
AAAAAAAAAAAAAAAAATTGATGAGGGGTTCTGATTTCGCATTACTGGACGATGATGTTT
CTTAGTATTGCATTCTTCCAAAGAATAGTTCTATTTAACCCCTTGGATGAAGTGCTGATG
TGTTTAAGATGTTAAGAATGTTTTTTTTATGCAATATATGTTTCTAAAAAAAAAAAAAAA
AA |
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| Species | Vigna unguiculata |
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| Publication | [view all] |
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| Contact | Timothy Close
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Publications
| Year | Publication |
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| 2009 | Muchero W, Diop NN, Bhat PR, Fenton RD, Wanamaker S, Pottorff M, Hearne S, Cisse N, Fatokun C, Ehlers JD, Roberts PA, Close TJ. A consensus genetic map of cowpea [Vigna unguiculata (L) Walp.] and synteny based on EST-derived SNPs. Proceedings of the National Academy of Sciences of the United States of America. 2009 Oct 27; 106(43):18159-64. |
Sequence
>Vu_UCR09-1_0512 ID=Vu_UCR09-1_0512; Name=Vu_UCR09-1_0512; organism=Vigna unguiculata; type=genetic_marker; length=1341bp
AAACAGACGCCGAAGCTCGCGCTTTCGCTTGGTCTTACTCAGCAAATGCC
TGATATGATTGAAGAGTTGATCAGCAAAGGGCAGCAGCTTGATGCAGTTC
ATTTTACATATGAAGTGGGTCTTGTGGATAAGTTTCCTCCTGTTCCCTTG
TTGAAGTCTTTTCTCAAGGATGCTAAGAAAGTTGCGGCTTCTATTTTGGA
AGATCCTAATAATGCAGGCCGAGCAGCGTTGGAAGATAAAAAAGGGCCGG
AAATGTACCTAGCTGCAAGGAAAGAGCAGTCTGCACTCAGGGCTGTGATT
AAATGCATCGAAGAATACAAACTTGAGGCTGATTTCCCTCCAGAAAATCT
GAAGAAGCGACTTGAACAGTTGGAGAAGGTGAAGACAGTGAAGACCGAGA
AAAGGAAACCGGCTGCTGTTCCTGCCAATAAGAGAACTCGAGCAAGCAAC
AGCAATGGAGGTCCAATGCCACCAGCCAAAGCTGGGCGTTTGACTAATGC
GTATGTATCATCTTTCCCTGCTGCTCCTACATTTGTTAGGTCTCCATCAC
ACGGGCAATACCCAGCTGCTCTTCCACCATACCCTTCCCCACCCCACATG
TATGGCAGCAGAAGTCCCCCGGCAAATCCTTATGCTGCTTATTCGCCTGA
GCCTGCACCAGCTATTGCAGGATCTTACCCAGCGGCTCCCATGAACTATC
CTGCATATGGTGGCTATGGAAATGTCTTGGCACCCACTTATCAGCAGGCT
TACTACCGATAGAAATGACAACCCTCGAAGATGGTAACCACTGATATGAC
GACCTTGATCAAATTTACTTTCGCAATGTTGTTTGTAATCACTAACCGTT
TAACGGTAGCAGTTCTGTGTGTTAATTATAACTACTGTCCCACTTCCTGC
TCTGCGTGGGGATAAG[C]TGTATTTCTAATGTTGATCCCATAGTACTAG
GTGATTGTGGAAAGTAACTAGGACGGCCAAGAAACATCAGAAACTCAACA
ACCACTGTTCGGTTTAGTTGTAGAAAGACTTACTGTGTTTACATTATATG
CTTATCTTGGGATCGAACTGAAGGAAAACAAAAAAGGAAAAAAGGTAATC
TGTTTCTTGGCAGCTGTTGACTATGGTATAAAGACTATAAAGGAAATAAT
TTTGTCTGAAAAAAAAAAAAAAAAAATTGATGAGGGGTTCTGATTTCGCA
TTACTGGACGATGATGTTTCTTAGTATTGCATTCTTCCAAAGAATAGTTC
TATTTAACCCCTTGGATGAAGTGCTGATGTGTTTAAGATGTTAAGAATGT
TTTTTTTATGCAATATATGTTTCTAAAAAAAAAAAAAAAAA
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