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Marker Overview
| Name | Vu_UCR09-1_0578 |
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | T |
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| 5' Flanking Sequence | GATGGCTTCTTCTCATATTGAATCATTGGTTGTGTTTGTGGTCATTGGCATGGTGACATT
AATCATCCCTGTCAATGCAAACCTCTCTCCTCATTTCTATGATAAAGTTTGCCCTAAAGC
ATTACCTGTCATAAGGTCAGTGGTTCAAAGAGCAATTAACAGAGAACCACGCATTGGAGC
TTCTCTTCTGCGCTTGCATTTCCATGACTGCTTCGTCAATGGGTGTGATGGATCCATTTT
GCTAGATGACACCAGAAACTTCATTGG |
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| 3' Flanking Sequence | GAGAAGACAGCTTTTCCAAATAATAATTCAGCAAGAGGCTTTTCTGTGGTTGATGAAATC
AAAGCAGCAGTTGACAAGGCCTGTAAACGGCCAGTGGTGTCGTGTGCAGATATCTTAGCC
ATAGCAGCTCGTGATTCCGTAGCCATTTATGGGGGTAAAGACTTTTGGTACCAAGTGTTG
TTGGGAAGAAGAGATGCAAGAACGGCAAGCAGGGATGCTGCAAATTCAAATCTTCCTCCA
CCAACCTTCAGCTTCTCTCAGCTTGTTTCCAACTTCAAAAATCAGGGATTGAATGTGAGG
GACCTTGTGGCTCTCTCTGGAGGCCACACCATTGGCTTTGCAAGGTGCACTACGTTCAGA
AACAGAATCTACAATGAATCCAACATTGACACCAAGTTTGCAGCATCTTTGAGGAACATA
TGTCCTCGACGTGGTGGAGACAACAACTTAGAAAAATTGGATGCTACTCCTGCAAGAGCT
GATTCCACGTACTTCACCGATTTGCTGCACAAAAAGGGTCTCCTCCATTCTGATCAAGAA
CTGTTCAAGGGAGAAGGCAGAGAAAGTGACAAGCTGGTGCAGCTATACAGTAGAAGCACT
TTGGCTTTTGCTAGAGATTTCAAAGCTTCAATGATCAAAATGGGTAACTTGAAGCCTCTT
ACTGGGAATCAGGGAGAGATCAGATGCCATTGCAGAAGGGTCAATTAGAATCGGAAATTA
CTAGGTCTGAGTTTCAATAATGGTATGCAGAGGAAAGAATAAGAAGCTGTATGTATTGTT
GTACCATATTGTATTATATGCTTGGTCATGTCAATTTTAGACGTGACTGTGTATTGTTCA
ACGAAACATTTTGCGTGTTGTATGTGTTGTTTTAAGCAACTTCAAATGATCAATAGTTGA
ACTCAAATGGTAATCTAAAAAAAAAAAAAAA |
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| Species | Vigna unguiculata |
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| Publication | [view all] |
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| Contact | Timothy Close
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Publications
| Year | Publication |
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| 2009 | Muchero W, Diop NN, Bhat PR, Fenton RD, Wanamaker S, Pottorff M, Hearne S, Cisse N, Fatokun C, Ehlers JD, Roberts PA, Close TJ. A consensus genetic map of cowpea [Vigna unguiculata (L) Walp.] and synteny based on EST-derived SNPs. Proceedings of the National Academy of Sciences of the United States of America. 2009 Oct 27; 106(43):18159-64. |
Sequence
>Vu_UCR09-1_0578 ID=Vu_UCR09-1_0578; Name=Vu_UCR09-1_0578; organism=Vigna unguiculata; type=genetic_marker; length=1201bp
GATGGCTTCTTCTCATATTGAATCATTGGTTGTGTTTGTGGTCATTGGCA
TGGTGACATTAATCATCCCTGTCAATGCAAACCTCTCTCCTCATTTCTAT
GATAAAGTTTGCCCTAAAGCATTACCTGTCATAAGGTCAGTGGTTCAAAG
AGCAATTAACAGAGAACCACGCATTGGAGCTTCTCTTCTGCGCTTGCATT
TCCATGACTGCTTCGTCAATGGGTGTGATGGATCCATTTTGCTAGATGAC
ACCAGAAACTTCATTGG[T]GAGAAGACAGCTTTTCCAAATAATAATTCA
GCAAGAGGCTTTTCTGTGGTTGATGAAATCAAAGCAGCAGTTGACAAGGC
CTGTAAACGGCCAGTGGTGTCGTGTGCAGATATCTTAGCCATAGCAGCTC
GTGATTCCGTAGCCATTTATGGGGGTAAAGACTTTTGGTACCAAGTGTTG
TTGGGAAGAAGAGATGCAAGAACGGCAAGCAGGGATGCTGCAAATTCAAA
TCTTCCTCCACCAACCTTCAGCTTCTCTCAGCTTGTTTCCAACTTCAAAA
ATCAGGGATTGAATGTGAGGGACCTTGTGGCTCTCTCTGGAGGCCACACC
ATTGGCTTTGCAAGGTGCACTACGTTCAGAAACAGAATCTACAATGAATC
CAACATTGACACCAAGTTTGCAGCATCTTTGAGGAACATATGTCCTCGAC
GTGGTGGAGACAACAACTTAGAAAAATTGGATGCTACTCCTGCAAGAGCT
GATTCCACGTACTTCACCGATTTGCTGCACAAAAAGGGTCTCCTCCATTC
TGATCAAGAACTGTTCAAGGGAGAAGGCAGAGAAAGTGACAAGCTGGTGC
AGCTATACAGTAGAAGCACTTTGGCTTTTGCTAGAGATTTCAAAGCTTCA
ATGATCAAAATGGGTAACTTGAAGCCTCTTACTGGGAATCAGGGAGAGAT
CAGATGCCATTGCAGAAGGGTCAATTAGAATCGGAAATTACTAGGTCTGA
GTTTCAATAATGGTATGCAGAGGAAAGAATAAGAAGCTGTATGTATTGTT
GTACCATATTGTATTATATGCTTGGTCATGTCAATTTTAGACGTGACTGT
GTATTGTTCAACGAAACATTTTGCGTGTTGTATGTGTTGTTTTAAGCAAC
TTCAAATGATCAATAGTTGAACTCAAATGGTAATCTAAAAAAAAAAAAAA
A
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