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Marker Overview
| Name | Vu_UCR09-1_0945 |
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | G |
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| 5' Flanking Sequence | CTTGCACCGCAGGAACACACTCTGGGCACCACTATCCCACAACCATCGTCAAAAACACCG
AAAACAAACACAAGACACAGAACACTAAAACAAACCTTCTCTCTCTGTTTCTCCTCACAG
AA |
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| 3' Flanking Sequence | CAGAGAATGCAGCGCCTCACCGTCTCCACCCTTCTCCTTTCCCTAACTCTTCTCACCCTC
GCAGATGGGGGTTCCATTGGAGTTAACTACGGTCGCATAGCGAACAACCTTCCCTCCGCG
GTTAAGGTTGTTCATCTCCTCAAATCCCAGGGGCTGAACCGGGTCAAAGTCTACGACACC
GACCCGGCAGTGCTTCGGGCATTATCCGGATCCGGAATCAAAGTCACTGTTGATCTTCCA
AACATGCAACTCTTCGCAGCAGCGAAAGCACCCTCCTTTGCATCCTCCTGGGTCGAAAGA
AACGTCGTCGCTTACTACCCTCACACGCAAATCGAAGCCATTGCGGTTGGGAACGAGGTT
TTCGTAGACACACACAACACCACCAAGTTCCTGGTACCGGCCATGAAAAACATCCACCAA
GCGCTTGTGAAGCACAACCTCGACTCCGACATTAAGGTTTCCTCCCCCATTGCCCTCTCT
GCGTTGGCCAACTCGTACCCATCCTCGTCCGGATCGTTTCGACCCGATCTCGTTGAACCC
GTTTTCAAACCCATGCTGGAGTTCCTCCGCCAAACTGGGTCATACTTAATGGTGAACGTG
TACCCGTTCTTTGCGTACGAGTCCAACGCTGACGTCATCCCTTTGGACTACGCGCTTTTC
CGAGAGAACCCGGGCGTGGTGGATCCGGGTAACGGGTTGAGATACTATAACCTATTTGAC
GCCCAAATCGACGCCGTTTTCTCCGCATTGAGTGCTCTCAAATACGACGATGTTAACATT
GTAGTGACCGAAACAGGGTGGCCTTCCAAGGGGGATAGTAATGAGGTAGGTGCGAGCGTA
GAGAACGCCGCGGCATTCAACGGTAATCTCGTCCGTAAGATCTTAACCGGTGGCGGGACC
CCACTTCGACCCAAAGCCGATCTGACCGTCTATTTGTTCGCACTTTTTAATGAGAATCAG
AAGCCCGGACCCACCTCCGAGAGAAACTTTGGGCTTTTTAACCCTGACGAGACGAGGGTC
TACAATGTTCCGTTAACTCAGGATGAACTCAAGGACTACCACGACCATCCCTCACCGGTG
AAGGGTAGCAGTCCGAAACAGAACACCCCAGCGCCGGCACCTGTCGTGAGTGGCGGCGTG
TCGAAGAGCACCACCGGTAACACTTGGTGTGTTGCGAACCCGGATGCCGATAAAGTTAAG
CTGCAGGCCGCTCTAGATTTCGCTTGCGGCGAGGGAGGTGCTGACTGCGCTCCGATTCAG
CACGGTGCCACGTGTTATGATCCTAACACGGTTGTGGCCCACGCTTCGTTTGCCTTCAAT
AGTTACTACCAGAAGCAATCACGGAAGGGCGGAAGCTGCTACTTCGGGGGTACGTCCTAC
GTGGTCACGCAGGAGCCTAGGTATGGTAACTGCGTGTTTCCTACAGGATACTAAAAAGCT
CAAGAAGACTGACATATTCCCGCATGAGAATATGCATATGCCTGATTTTGCTTTGTGTAA
AGTATGTTATGAGAATGAATGTGTCTGGAAGTGAAACTAGGAAAAGGGGACTAAATTAGT
TTGAATATTTTTTTGGGGTTCTGATTATGTTAGTTAAATAATGTTGACTTTTTCACCCAG
TTGGTGGGAACTGGGAATGGAATGGGGTAGTTAAATTAATTTTACTTTGGGGACTAAAGT
AATTGTATCTAAGTTTAAGTTTTCACTTTGCAGTAGACATTATCTTTTGATTCCTCAGAC
ATTGTTCTCATGTTTCCTTGTATTCGAAACCAGGTTCCTTTTTTCTTAAAAAAAAAAAAA
AAAAA |
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| Species | Vigna unguiculata |
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| Publication | [view all] |
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| Contact | Timothy Close
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Publications
| Year | Publication |
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| 2009 | Muchero W, Diop NN, Bhat PR, Fenton RD, Wanamaker S, Pottorff M, Hearne S, Cisse N, Fatokun C, Ehlers JD, Roberts PA, Close TJ. A consensus genetic map of cowpea [Vigna unguiculata (L) Walp.] and synteny based on EST-derived SNPs. Proceedings of the National Academy of Sciences of the United States of America. 2009 Oct 27; 106(43):18159-64. |
Sequence
>Vu_UCR09-1_0945 ID=Vu_UCR09-1_0945; Name=Vu_UCR09-1_0945; organism=Vigna unguiculata; type=genetic_marker; length=1930bp
CTTGCACCGCAGGAACACACTCTGGGCACCACTATCCCACAACCATCGTC
AAAAACACCGAAAACAAACACAAGACACAGAACACTAAAACAAACCTTCT
CTCTCTGTTTCTCCTCACAGAA[G]CAGAGAATGCAGCGCCTCACCGTCT
CCACCCTTCTCCTTTCCCTAACTCTTCTCACCCTCGCAGATGGGGGTTCC
ATTGGAGTTAACTACGGTCGCATAGCGAACAACCTTCCCTCCGCGGTTAA
GGTTGTTCATCTCCTCAAATCCCAGGGGCTGAACCGGGTCAAAGTCTACG
ACACCGACCCGGCAGTGCTTCGGGCATTATCCGGATCCGGAATCAAAGTC
ACTGTTGATCTTCCAAACATGCAACTCTTCGCAGCAGCGAAAGCACCCTC
CTTTGCATCCTCCTGGGTCGAAAGAAACGTCGTCGCTTACTACCCTCACA
CGCAAATCGAAGCCATTGCGGTTGGGAACGAGGTTTTCGTAGACACACAC
AACACCACCAAGTTCCTGGTACCGGCCATGAAAAACATCCACCAAGCGCT
TGTGAAGCACAACCTCGACTCCGACATTAAGGTTTCCTCCCCCATTGCCC
TCTCTGCGTTGGCCAACTCGTACCCATCCTCGTCCGGATCGTTTCGACCC
GATCTCGTTGAACCCGTTTTCAAACCCATGCTGGAGTTCCTCCGCCAAAC
TGGGTCATACTTAATGGTGAACGTGTACCCGTTCTTTGCGTACGAGTCCA
ACGCTGACGTCATCCCTTTGGACTACGCGCTTTTCCGAGAGAACCCGGGC
GTGGTGGATCCGGGTAACGGGTTGAGATACTATAACCTATTTGACGCCCA
AATCGACGCCGTTTTCTCCGCATTGAGTGCTCTCAAATACGACGATGTTA
ACATTGTAGTGACCGAAACAGGGTGGCCTTCCAAGGGGGATAGTAATGAG
GTAGGTGCGAGCGTAGAGAACGCCGCGGCATTCAACGGTAATCTCGTCCG
TAAGATCTTAACCGGTGGCGGGACCCCACTTCGACCCAAAGCCGATCTGA
CCGTCTATTTGTTCGCACTTTTTAATGAGAATCAGAAGCCCGGACCCACC
TCCGAGAGAAACTTTGGGCTTTTTAACCCTGACGAGACGAGGGTCTACAA
TGTTCCGTTAACTCAGGATGAACTCAAGGACTACCACGACCATCCCTCAC
CGGTGAAGGGTAGCAGTCCGAAACAGAACACCCCAGCGCCGGCACCTGTC
GTGAGTGGCGGCGTGTCGAAGAGCACCACCGGTAACACTTGGTGTGTTGC
GAACCCGGATGCCGATAAAGTTAAGCTGCAGGCCGCTCTAGATTTCGCTT
GCGGCGAGGGAGGTGCTGACTGCGCTCCGATTCAGCACGGTGCCACGTGT
TATGATCCTAACACGGTTGTGGCCCACGCTTCGTTTGCCTTCAATAGTTA
CTACCAGAAGCAATCACGGAAGGGCGGAAGCTGCTACTTCGGGGGTACGT
CCTACGTGGTCACGCAGGAGCCTAGGTATGGTAACTGCGTGTTTCCTACA
GGATACTAAAAAGCTCAAGAAGACTGACATATTCCCGCATGAGAATATGC
ATATGCCTGATTTTGCTTTGTGTAAAGTATGTTATGAGAATGAATGTGTC
TGGAAGTGAAACTAGGAAAAGGGGACTAAATTAGTTTGAATATTTTTTTG
GGGTTCTGATTATGTTAGTTAAATAATGTTGACTTTTTCACCCAGTTGGT
GGGAACTGGGAATGGAATGGGGTAGTTAAATTAATTTTACTTTGGGGACT
AAAGTAATTGTATCTAAGTTTAAGTTTTCACTTTGCAGTAGACATTATCT
TTTGATTCCTCAGACATTGTTCTCATGTTTCCTTGTATTCGAAACCAGGT
TCCTTTTTTCTTAAAAAAAAAAAAAAAAAA
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