CcM00698

Name	CcM00698
Genbank ID	FI208758
Type	SSR
Species	Cajanus cajan
Repeat Motif	(AAT)17
Primer 1	CcM00698.Forward: CTCTTCTTGTTGTCCCTCGC
Primer 2	CcM00698.Reverse: GCAGTTCTGGAATACCTCGC
Product Length	188
Publication	[view all]
Contact	Douglas Cook

Name	Details
Douglas Cook	First name: Douglas Last name: Cook Institution: University of California, Davis Country: United States Email: drcook@ucdavis.edu Last update: Mar 2011

Database	Accession
DB:genbank	FI208758

Feature Name	Type	Location	Analysis	Reference
Chr_3-CM003605.1	supercontig	Chr_3-CM003605.1:16108275..16108462 .	Cajanus cajan Asha genome v1.0	PCD marker alignment to genome using primer sequences

Year	Publication
2011	Bohra A, Dubey A, Saxena RK, Penmetsa RV, Poornima KN, Kumar N, Farmer AD, Srivani G, Upadhyaya HD, Gothalwal R, Ramesh S, Singh D, Saxena K, Kishor PBK, Singh NK, Town CD, May GD, Cook DR, Varshney RK. Analysis of BAC-end sequences (BESs) and development of BES-SSR markers for genetic mapping and hybrid purity assessment in pigeonpea (Cajanus spp.). BMC Plant Biology. 2011; 11:56.

#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Pigeon_pea-ICP_28/ICPW_94-F2	LG09	N/A	38.6	CcM0698	View
2	Pigeon_pea-ICRISAT_consensus_map-2012	LG09	N/A	48.39	CcM0698	View