CcM01947 | PulseDB

Marker Overview

Marker Overview


Name	CcM01947
Genbank ID	FI243367
Type	SSR
Species	Cajanus cajan
Repeat Motif	(TC)7(TA)5
Primer 1	CcM01947.Forward: TAATCCGGTTTCGTCAAAGC
Primer 2	CcM01947.Reverse: GGCAATCTTTCACCGTTTTC
Product Length	259
Publication	[view all]
Contact	Douglas Cook

Contact

Name

Details

Douglas Cook

First name:	Douglas
Last name:	Cook
Institution:	University of California, Davis
Country:	United States
Email:	drcook@ucdavis.edu
Last update:	Mar 2011

References

External references for this genetic_marker


Database	Accession
DB:genbank	FI243367

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Scaffold132083-KQ483711.1	supercontig	Scaffold132083-KQ483711.1:81790..82048 .

Publications


Year	Publication
2011	Bohra A, Dubey A, Saxena RK, Penmetsa RV, Poornima KN, Kumar N, Farmer AD, Srivani G, Upadhyaya HD, Gothalwal R, Ramesh S, Singh D, Saxena K, Kishor PBK, Singh NK, Town CD, May GD, Cook DR, Varshney RK. Analysis of BAC-end sequences (BESs) and development of BES-SSR markers for genetic mapping and hybrid purity assessment in pigeonpea (Cajanus spp.). BMC Plant Biology. 2011; 11:56.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Pigeon_pea-ICRISAT_consensus_map-2012	LG01	N/A	29.02	CcM1947	View