lentil-CassabxILL2024-F6 | PulseDB

Map Overview


Name	lentil-CassabxILL2024-F6
Species	Lens culinaris
Map type	genetic
Population type	F6-RIL
Map unit	cM
Maternal parent	Cassab
Paternal parent	ILL2024
Population size	126
Number of loci	297
Number of QTL	2
Number of linkage groups	10
Publication	[view all]
Contact	John W. Forster

Stock

Name

Type

Details

Cassab_×_ILL2024-F6-RIL

population

Origin detail:	Australia
Population size:	126

Contact

Name

Details

John W. Forster

First name:	John
Last name:	Forster
Institution:	La Trobe University Research and Development Park
Address:	Bundoora, VIC 3083, Australia
Country:	Australia
Email:	john.forster@depi.vic.gov.au

Publication


Year	Publications
2014	Kaur S, Cogan NOI, Stephens A, Noy D, Butsch M, Forster JW, Materne M. EST-SNP discovery and dense genetic mapping in lentil (Lens culinaris Medik.) enable candidate gene selection for boron tolerance. Theoretical and applied genetics. 2014; 127(3):703-713.

Map Loci

This map contains 297 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
lentil-CassabxILL2024-F6.LG5.1	SNP_20001530	SNP_20001530	marker_locus	0.8 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_20001014	SNP_20001014	marker_locus	3.4 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_20001471	SNP_20001471	marker_locus	7.5 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_20004981	SNP_20004981	marker_locus	8.8 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_20001472	SNP_20001472	marker_locus	13.3 cM
lentil-CassabxILL2024-F6.LG5.1	PBA_LC_0359	PBA_LC_0359	marker_locus	22.4 cM
lentil-CassabxILL2024-F6.LG5.1	PBA_LC_0203	PBA_LC_0203	marker_locus	25.8 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_20000662	SNP_20000662	marker_locus	26.6 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_20004080	SNP_20004080	marker_locus	26.6 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_20004077	SNP_20004077	marker_locus	30.6 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_20003768	SNP_20003768	marker_locus	39.8 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_60000259	SNP_60000259	marker_locus	51.4 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_60000263	SNP_60000263	marker_locus	51.4 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_20004634	SNP_20004634	marker_locus	58.1 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_20001151	SNP_20001151	marker_locus	80.1 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_20000674	SNP_20000674	marker_locus	103.4 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_20002151	SNP_20002151	marker_locus	103.4 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_20000672	SNP_20000672	marker_locus	107 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_20001958	SNP_20001958	marker_locus	118.2 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_20003933	SNP_20003933	marker_locus	143.4 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_20005831	SNP_20005831	marker_locus	146.4 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_20004962	SNP_20004962	marker_locus	146.8 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_20005830	SNP_20005830	marker_locus	148.5 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_20005832	SNP_20005832	marker_locus	151.5 cM
lentil-CassabxILL2024-F6.LG5.1	SNP_20003732	SNP_20003732	marker_locus	161.9 cM

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Map QTL

This map contains 2 QTL:

Download Table


Linkage Group	Name	Type	Start	Stop	Peak
lentil-CassabxILL2024-F6.LG4.2	qBTOL.Cassab/ILL2024.LG4-2.08	QTL	-	-	7.5 cM
lentil-CassabxILL2024-F6.LG4.2	qBTOL.Cassab/ILL2024.LG4-2.09	QTL	-	-	7.5 cM

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