Lens_culinaris_v1_Contig941

Contig Overview


Name	Lens_culinaris_v1_Contig941
Unique Name	Lens_culinaris_v1_Contig941
Type	contig
Organism	Lens culinaris (lentil)
Sequence length	745

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
GT626030	EST	GT626030:17..649 +	Lens culinaris unigene v1	n/a
GT624661	EST	GT624661:229..714 +	Lens culinaris unigene v1	n/a
GT618863	EST	GT618863:1..745 +	Lens culinaris unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GT626030	GT626030	Lens culinaris	EST
GT624661	GT624661	Lens culinaris	EST
GT618863	GT618863	Lens culinaris	EST

Homology

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BLAST of Lens_culinaris_v1_Contig941 vs. SwissProt
Match: RS3A_CICAR (40S ribosomal protein S3a OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 324.709 bits (831), Expect = 3.282e-88
Identity = 160/168 (95.24%), Postives = 165/168 (98.21%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKIERPADETVVEGTPEIVGA 506
            KN+LTNF+GMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRR+NQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKAT  IYPLQNVFIRKVKILK+PKFDLGKLMEVHGDYSEDVGTK+E PADETVVEGTPEIVGA
Sbjct:   94 KNVLTNFYGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKSPKFDLGKLMEVHGDYSEDVGTKVESPADETVVEGTPEIVGA 261

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BLAST of Lens_culinaris_v1_Contig941 vs. SwissProt
Match: RS3A1_VITVI (40S ribosomal protein S3a-1 OS=Vitis vinifera GN=GSVIVT00020038001 PE=3 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.744e-81
Identity = 145/168 (86.31%), Postives = 156/168 (92.86%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKIERPADETVVEGTPEIVGA 506
            +N+LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLR+FCI FTK+R NQ K+TCYAQSSQIRQIRRKMREIM N ATSCDLKELV+KFIPE IG+EIEKAT  IYPLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVGTK+ERPADE V EG  E++GA
Sbjct:   94 RNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREIMTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKLERPADEPVAEGVTEVIGA 261

[Close]

BLAST of Lens_culinaris_v1_Contig941 vs. SwissProt
Match: RS3A_DAUCA (40S ribosomal protein S3a OS=Daucus carota GN=cyc07 PE=2 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 1.632e-79
Identity = 145/168 (86.31%), Postives = 157/168 (93.45%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKIERPADETVVEGTPEIVGA 506
            KN+LTNF+GMDFTTDKLRSLVRKWQTLIEAHVDVKTTD+YTLRMFCIGFTK+RANQ KRTCYAQSSQIRQIRRKM EIM NQA+SCDLKELV KFIPE IG+EIEKAT  I+PLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVG K+ERP +ET+VEG  E+VGA
Sbjct:   94 KNVLTNFYGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLERPIEETMVEGETEVVGA 261

[Close]

BLAST of Lens_culinaris_v1_Contig941 vs. SwissProt
Match: RS3A_TOBAC (40S ribosomal protein S3a OS=Nicotiana tabacum GN=cyc07 PE=2 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 8.102e-79
Identity = 143/168 (85.12%), Postives = 154/168 (91.67%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKIERPADETVVEGTPEIVGA 506
            KN+LTNFWGMDFTTDKLRSLV+KWQTLIEAHVDVKTTD+YTLRMFCI FTK+R NQ KRTCYAQSSQIRQIRRKM EIM NQA+SCDLKELV KFIPE IG+EIEKAT  I+PLQNV+IRKVKILKAPKFD+GKLMEVHGDYSEDVG K++RPADETV E  PEI GA
Sbjct:   94 KNVLTNFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDSYTLRMFCIAFTKKRPNQQKRTCYAQSSQIRQIRRKMVEIMRNQASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVYIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLDRPADETVAEAEPEIPGA 261

[Close]

BLAST of Lens_culinaris_v1_Contig941 vs. SwissProt
Match: RS3A_CATRO (40S ribosomal protein S3a OS=Catharanthus roseus GN=RPS3A PE=2 SV=4)

HSP 1 Score: 293.508 bits (750), Expect = 8.102e-79
Identity = 145/169 (85.80%), Postives = 159/169 (94.08%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGTKIERPADETVVEGTPEIVGA 506
            KN+LTNFWGMDFTTDKLRSLVRKWQ+LIEAHVDVKTTD+YTLRMFCIGFTK+RANQ KRTCYAQSSQIRQIRRKMREIMVNQA SCDLK+LV+KFIPE IG+EIEKAT  IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+E D+GTK++RPA+E V E T E++GA
Sbjct:   94 KNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQAQSCDLKDLVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNEDDIGTKLDRPAEEAVAEPT-EVIGA 261

[Close]

BLAST of Lens_culinaris_v1_Contig941 vs. SwissProt
Match: RS3A2_ARATH (40S ribosomal protein S3a-2 OS=Arabidopsis thaliana GN=RPS3AB PE=2 SV=3)

HSP 1 Score: 293.123 bits (749), Expect = 1.058e-78
Identity = 145/169 (85.80%), Postives = 156/169 (92.31%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGTKIERPADETVVEGTPEIVGA 506
            +N+LT FWGMDFTTDKLRSLV+KWQTLIEAHVDVKTTD YTLRMFCI FTKRRANQVKRTCYAQSSQIRQIRRKM EIMV +A+SCDLKELV KFIPE IG+EIEKAT GIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY +EDVG K++RPADET+VE   EI+GA
Sbjct:   94 RNVLTQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDGYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMSEIMVKEASSCDLKELVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDVGVKVDRPADETMVEEPTEIIGA 262

[Close]

BLAST of Lens_culinaris_v1_Contig941 vs. SwissProt
Match: RS3A_HELAN (40S ribosomal protein S3a OS=Helianthus annuus GN=RPS3A PE=2 SV=2)

HSP 1 Score: 290.812 bits (743), Expect = 5.251e-78
Identity = 141/168 (83.93%), Postives = 156/168 (92.86%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKIERPADETVVEGTPEIVGA 506
            KN+LTNFWGMD TTDKLRSLV+KWQ+LIEAHVDVKTTDN+TLRMFCIGFTK+RANQVKRTCYAQSSQI+QIRRKMREIMV QA +CDLKELV+KFIPE IG+EIEKAT  IYPLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVG K++RPA+E   E T E++GA
Sbjct:   94 KNVLTNFWGMDVTTDKLRSLVKKWQSLIEAHVDVKTTDNFTLRMFCIGFTKKRANQVKRTCYAQSSQIKQIRRKMREIMVTQAQTCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLDRPAEEAAPEAT-EVIGA 260

[Close]

BLAST of Lens_culinaris_v1_Contig941 vs. SwissProt
Match: RS3A1_ARATH (40S ribosomal protein S3a-1 OS=Arabidopsis thaliana GN=RPS3AA PE=1 SV=3)

HSP 1 Score: 287.345 bits (734), Expect = 5.806e-77
Identity = 141/169 (83.43%), Postives = 155/169 (91.72%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGTKIERPADETVVEGTPEIVGA 506
            +N+L  FWGMDFTTDKLRSLV+KWQTLIEAHVDVKTTD+YTLR+FCI FTKRRANQVKRTCYAQSSQIRQIRRKMR+IMV +A+SCDLK+LV KFIPE IG+EIEKAT GIYPLQNVFIRKVKILKAPKFDLGKLM+VHGDYS EDVG K++RPADE  VE   EI+GA
Sbjct:   94 RNVLCQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDSYTLRLFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMRDIMVREASSCDLKDLVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMDVHGDYSAEDVGVKVDRPADEMAVEEPTEIIGA 262

[Close]

BLAST of Lens_culinaris_v1_Contig941 vs. SwissProt
Match: RS3A_BRARA (40S ribosomal protein S3a OS=Brassica rapa GN=RPS3A PE=2 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 9.270e-75
Identity = 142/170 (83.53%), Postives = 155/170 (91.18%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMV-NQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGTKIERPADETVVEGTPEIVGA 506
            +N+LT FWGMDFTTDKLRSLV+KWQTLIE+HVDVKTTDNYTLR+FCI FTKRRANQVKRTCYAQSSQIRQIR KMREIM+  +A+SCDLKELV KFIPE IGK+IEKAT GIYPLQNVFIRKVKILKAPKFDL KLMEVHGDY +EDVG K++RPADE V E T EI+GA
Sbjct:   94 RNVLTQFWGMDFTTDKLRSLVKKWQTLIESHVDVKTTDNYTLRLFCIAFTKRRANQVKRTCYAQSSQIRQIRSKMREIMIKEEASSCDLKELVAKFIPESIGKDIEKATQGIYPLQNVFIRKVKILKAPKFDLRKLMEVHGDYTAEDVGVKVDRPADEVVEEPT-EIIGA 262

[Close]

BLAST of Lens_culinaris_v1_Contig941 vs. SwissProt
Match: RS3A_ORYSJ (40S ribosomal protein S3a OS=Oryza sativa subsp. japonica GN=RPS3A PE=2 SV=2)

HSP 1 Score: 277.33 bits (708), Expect = 6.008e-74
Identity = 134/162 (82.72%), Postives = 149/162 (91.98%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGTKIERPADETVVEG 485
            KN+LTNFWGM FTTDKLRSLV+KWQTLIEAHVDVKTTD Y LR+FCIGFTKRR NQVKRTCYAQ+SQIRQIRRKM EIM NQA+SCDLKELV KFIPE+IGKEIEKAT  I+PLQNVF+RKVKILKAPKFDLGKLMEVHGDY+ ED+GTK++RPA++  + G
Sbjct:   94 KNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRLFCIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMANQASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGDYAKEDIGTKLDRPAEDEAMAG 255

[Close]

BLAST of Lens_culinaris_v1_Contig941 vs. TrEMBL
Match: C6TLT3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 1.773e-84
Identity = 154/168 (91.67%), Postives = 161/168 (95.83%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKIERPADETVVEGTPEIVGA 506
            KN+LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRR+NQVKRTCYAQSSQIRQIRRKMREIMVNQAT+CDLKELVRKFIPEMIGKEIEKAT  IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG K++RPADET+ E   E+VGA
Sbjct:   94 KNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMVNQATACDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGAKVDRPADETLAEEATEVVGA 261

[Close]

BLAST of Lens_culinaris_v1_Contig941 vs. TrEMBL
Match: C6TLV6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 8.801e-84
Identity = 152/168 (90.48%), Postives = 160/168 (95.24%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKIERPADETVVEGTPEIVGA 506
            KN+LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRR+NQVKRTCYAQSSQ+RQIRRKMREIMVNQA +CDLKELVRKFIPEMIGKEIEKAT  IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG K++RPADET+ E   E+VGA
Sbjct:   94 KNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQVRQIRRKMREIMVNQAAACDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGAKVDRPADETLAEEATEVVGA 261

[Close]

BLAST of Lens_culinaris_v1_Contig941 vs. TrEMBL
Match: C6TI64_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 8.801e-84
Identity = 154/168 (91.67%), Postives = 159/168 (94.64%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKIERPADETVVEGTPEIVGA 506
            KN+LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIM NQATSCDLKELVRKFIPE+IGKEIEKAT  IYPLQNVF+RKVKILKAPKFDLGKLMEVHGDYSEDVG K++RPADE V E   EIVGA
Sbjct:   94 KNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMTNQATSCDLKELVRKFIPEIIGKEIEKATSSIYPLQNVFVRKVKILKAPKFDLGKLMEVHGDYSEDVGAKVDRPADEIVAEEPTEIVGA 261

[Close]

BLAST of Lens_culinaris_v1_Contig941 vs. TrEMBL
Match: C6TIB6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.961e-83
Identity = 153/168 (91.07%), Postives = 159/168 (94.64%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKIERPADETVVEGTPEIVGA 506
            KN+LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIM NQAT+CDLKELVRKFIPE+IGKEIEKAT  IYPLQNVF+RKVKILKAPKFDLGKLMEVHGDYSEDVG K++RPADE V E   EIVGA
Sbjct:   94 KNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMTNQATACDLKELVRKFIPEIIGKEIEKATSSIYPLQNVFVRKVKILKAPKFDLGKLMEVHGDYSEDVGAKVDRPADEIVAEEPTEIVGA 261

[Close]

BLAST of Lens_culinaris_v1_Contig941 vs. TrEMBL
Match: C6T8X0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 4.368e-83
Identity = 151/168 (89.88%), Postives = 159/168 (94.64%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKIERPADETVVEGTPEIVGA 506
            KN+LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIG TKRR+NQVKRTCYAQSSQ+RQIRRKMREIMVNQA +CDLKELVRKFIPEMIGKEIEKAT  IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG K++RPADET+ E   E+VGA
Sbjct:   94 KNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGLTKRRSNQVKRTCYAQSSQVRQIRRKMREIMVNQAAACDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGAKVDRPADETLAEEATEVVGA 261

[Close]

BLAST of Lens_culinaris_v1_Contig941 vs. TrEMBL
Match: B9MZF6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_922444 PE=3 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 1.271e-82
Identity = 150/168 (89.29%), Postives = 160/168 (95.24%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKIERPADETVVEGTPEIVGA 506
            +N+LTNFWGM FTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI FTKRR NQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCDLK+LV+KFIPE+IGKEIEKAT GIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS+D+G KI+RPADETV EG  E+VGA
Sbjct:   98 RNVLTNFWGMSFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIAFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKDLVQKFIPEVIGKEIEKATTGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSQDIGVKIDRPADETVAEGETEVVGA 265

[Close]

BLAST of Lens_culinaris_v1_Contig941 vs. TrEMBL
Match: B7FLW8_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 2.831e-82
Identity = 153/168 (91.07%), Postives = 158/168 (94.05%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKIERPADETVVEGTPEIVGA 506
            KNLLTNFWGM+FTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKM EIM+NQA+SCDLK LV KFIPEMIGKEIEKAT  IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+EDVGTK+ERPADE V E   EIVGA
Sbjct:   94 KNLLTNFWGMNFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMVEIMINQASSCDLKGLVHKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNEDVGTKVERPADEMVTEEPTEIVGA 261

[Close]

BLAST of Lens_culinaris_v1_Contig941 vs. TrEMBL
Match: A9PAJ6_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 1.076e-81
Identity = 149/168 (88.69%), Postives = 159/168 (94.64%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKIERPADETVVEGTPEIVGA 506
            +N+LTNFWGM FTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCI FTKR  NQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCDLK+LV+KFIPE+IGKEIEKAT GIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS+D+G KI+RPADETV EG  E+VGA
Sbjct:   94 RNVLTNFWGMSFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIAFTKRCPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKDLVQKFIPEVIGKEIEKATTGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSQDIGVKIDRPADETVAEGETEVVGA 261

[Close]

BLAST of Lens_culinaris_v1_Contig941 vs. TrEMBL
Match: D7T724_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_20.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018024001 PE=4 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 2.650e-80
Identity = 145/168 (86.31%), Postives = 156/168 (92.86%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKIERPADETVVEGTPEIVGA 506
            +N+LTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLR+FCI FTK+R NQ K+TCYAQSSQIRQIRRKMREIM N ATSCDLKELV+KFIPE IG+EIEKAT  IYPLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVGTK+ERPADE V EG  E++GA
Sbjct:   94 RNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREIMTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKLERPADEPVAEGVTEVIGA 261

[Close]

BLAST of Lens_culinaris_v1_Contig941 vs. TrEMBL
Match: A0N0S0_9ASPA (RPS3 OS=Cymbidium hybrid cultivar PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 7.710e-80
Identity = 144/168 (85.71%), Postives = 156/168 (92.86%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKIERPADETVVEGTPEIVGA 506
            KN+LTNFWGMDFTTDKLRSLVRKWQTLIEAH+DVKTTDNYTLR+FCIGFTKRR NQVKRTCYAQ+SQIRQIRRKMREIM NQA+SCDLKELV+KFIPE+IGKEIEKAT  IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY ED G K++RP ++  VEG  E+VGA
Sbjct:   94 KNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHIDVKTTDNYTLRLFCIGFTKRRPNQVKRTCYAQTSQIRQIRRKMREIMTNQASSCDLKELVQKFIPEVIGKEIEKATTSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYKEDFGVKLDRPGEDVPVEGEAEVVGA 261

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BLAST of Lens_culinaris_v1_Contig941 vs. TAIR peptide
Match: AT4G34670.1 (| Symbols: | Ribosomal protein S3Ae | chr4:16548724-16550222 FORWARD LENGTH=262)

HSP 1 Score: 293.123 bits (749), Expect = 1.052e-79
Identity = 145/169 (85.80%), Postives = 156/169 (92.31%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGTKIERPADETVVEGTPEIVGA 506
            +N+LT FWGMDFTTDKLRSLV+KWQTLIEAHVDVKTTD YTLRMFCI FTKRRANQVKRTCYAQSSQIRQIRRKM EIMV +A+SCDLKELV KFIPE IG+EIEKAT GIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY +EDVG K++RPADET+VE   EI+GA
Sbjct:   94 RNVLTQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDGYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMSEIMVKEASSCDLKELVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDVGVKVDRPADETMVEEPTEIIGA 262

[Close]

BLAST of Lens_culinaris_v1_Contig941 vs. TAIR peptide
Match: AT3G04840.1 (| Symbols: | Ribosomal protein S3Ae | chr3:1329751-1331418 FORWARD LENGTH=262)

HSP 1 Score: 287.345 bits (734), Expect = 5.775e-78
Identity = 141/169 (83.43%), Postives = 155/169 (91.72%), Query Frame = 3

Query:    3 KNLLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATCGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGTKIERPADETVVEGTPEIVGA 506
            +N+L  FWGMDFTTDKLRSLV+KWQTLIEAHVDVKTTD+YTLR+FCI FTKRRANQVKRTCYAQSSQIRQIRRKMR+IMV +A+SCDLK+LV KFIPE IG+EIEKAT GIYPLQNVFIRKVKILKAPKFDLGKLM+VHGDYS EDVG K++RPADE  VE   EI+GA
Sbjct:   94 RNVLCQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDSYTLRLFCIAFTKRRANQVKRTCYAQSSQIRQIRRKMRDIMVREASSCDLKDLVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMDVHGDYSAEDVGVKVDRPADEMAVEEPTEIIGA 262

The following BLAST results are available for this feature:

BLAST of Lens_culinaris_v1_Contig941 vs. SwissProt
BLAST of Lens_culinaris_v1_Contig941 vs. TrEMBL
BLAST of Lens_culinaris_v1_Contig941 vs. TAIR peptide

BLAST of Lens_culinaris_v1_Contig941 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RS3A_CICAR	3.282e-88	95.24	40S ribosomal protein S3a OS=Cicer arietinum PE=2 ...	[more]
RS3A1_VITVI	1.744e-81	86.31	40S ribosomal protein S3a-1 OS=Vitis vinifera GN=G...	[more]
RS3A_DAUCA	1.632e-79	86.31	40S ribosomal protein S3a OS=Daucus carota GN=cyc0...	[more]
RS3A_TOBAC	8.102e-79	85.12	40S ribosomal protein S3a OS=Nicotiana tabacum GN=...	[more]
RS3A_CATRO	8.102e-79	85.80	40S ribosomal protein S3a OS=Catharanthus roseus G...	[more]
RS3A2_ARATH	1.058e-78	85.80	40S ribosomal protein S3a-2 OS=Arabidopsis thalian...	[more]
RS3A_HELAN	5.251e-78	83.93	40S ribosomal protein S3a OS=Helianthus annuus GN=...	[more]
RS3A1_ARATH	5.806e-77	83.43	40S ribosomal protein S3a-1 OS=Arabidopsis thalian...	[more]
RS3A_BRARA	9.270e-75	83.53	40S ribosomal protein S3a OS=Brassica rapa GN=RPS3...	[more]
RS3A_ORYSJ	6.008e-74	82.72	40S ribosomal protein S3a OS=Oryza sativa subsp. j...	[more]

BLAST of Lens_culinaris_v1_Contig941 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TLT3_SOYBN	1.773e-84	91.67	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TLV6_SOYBN	8.801e-84	90.48	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TI64_SOYBN	8.801e-84	91.67	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TIB6_SOYBN	1.961e-83	91.07	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6T8X0_SOYBN	4.368e-83	89.88	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9MZF6_POPTR	1.271e-82	89.29	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B7FLW8_MEDTR	2.831e-82	91.07	Putative uncharacterized protein OS=Medicago trunc...	[more]
A9PAJ6_POPTR	1.076e-81	88.69	Putative uncharacterized protein OS=Populus tricho...	[more]
D7T724_VITVI	2.650e-80	86.31	Whole genome shotgun sequence of line PN40024, sca...	[more]
A0N0S0_9ASPA	7.710e-80	85.71	RPS3 OS=Cymbidium hybrid cultivar PE=2 SV=1	[more]

BLAST of Lens_culinaris_v1_Contig941 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT4G34670.1	1.052e-79	85.80	\| Symbols: \| Ribosomal protein S3Ae \| chr4:165487...	[more]
AT3G04840.1	5.775e-78	83.43	\| Symbols: \| Ribosomal protein S3Ae \| chr3:132975...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001593	Ribosomal protein S3Ae	PANTHER	PTHR11830	40S RIBOSOMAL PROTEIN S3A	coord: 1..168 score: 5.4e
IPR001593	Ribosomal protein S3Ae	PFAM	PF01015	Ribosomal_S3Ae	coord: 1..129 score: 2.2

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Lens_culinaris_v1_Contig941 ID=Lens_culinaris_v1_Contig941; Name=Lens_culinaris_v1_Contig941; organism=Lens culinaris; type=contig; length=745bp
GGAAAAACCTCTTGACCAACTTCTGGGGTATGGATTTCACAACTGACAAG
CTCAGGTCATTGGTTCGCAAGTGGCAAACTCTTATTGAAGCCCATGTCGA
TGTGAAAACCACCGATAATTACACTCTTAGGATGTTTTGCATTGGATTCA
CAAAGAGGCGTGCAAACCAAGTTAAGAGGACTTGTTATGCCCAATCTAGC
CAGATCAGACAGATCCGTAGGAAGATGAGGGAGATAATGGTCAACCAAGC
AACATCCTGTGACTTGAAAGAGCTTGTGCGTAAATTTATCCCTGAGATGA
TTGGAAAGGAGATTGAGAAGGCCACTTGTGGCATCTACCCGCTTCAGAAT
GTTTTCATTCGTAAAGTCAAGATCCTGAAAGCTCCTAAGTTTGATCTTGG
GAAACTGATGGAGGTTCATGGTGATTACTCAGAAGATGTTGGCACCAAGA
TAGAAAGACCTGCTGATGAGACAGTGGTAGAGGGTACACCCGAAATTGTT
GGAGCTTGATCCAACTAATTATGAATTTTTGTTTGTTTAGGATGTATGTG
CTGCTGTTTTCACCCAGTTTTGTTGACTAAAGTTTTTACTTATAAATTAT
TTCTGAATCTTTTTGTAATTCATTTTCAAGAATTGGTACATTTTTGGACC
TAAGCTTCAGCCTTACCCTACCATTCCCCTAAATTGTCTGTTGAGTTTTA
CTTATTGGTAACTTTATTTGATGATCATGCCTCTAAGTTGTTGAA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR001593	Ribosomal_eS1

Search form

Lens_culinaris_v1_Contig941