Pisum_sativum_v1_Contig1382

Contig Overview
NamePisum_sativum_v1_Contig1382
Unique NamePisum_sativum_v1_Contig1382
Typecontig
OrganismPisum sativum (pea)
Sequence length654
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CD860356ESTCD860356:44..418 -Pisum sativum unigene v1n/a
FG537037ESTFG537037:26..536 +Pisum sativum unigene v1n/a
FG537965ESTFG537965:1..612 +Pisum sativum unigene v1n/a
FG528868ESTFG528868:138..608 +Pisum sativum unigene v1n/a
FG534857ESTFG534857:169..654 +Pisum sativum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
CD860356CD860356Pisum sativumEST
FG537037FG537037Pisum sativumEST
FG537965FG537965Pisum sativumEST
FG528868FG528868Pisum sativumEST
FG534857FG534857Pisum sativumEST


Homology
BLAST of Pisum_sativum_v1_Contig1382 vs. TrEMBL
Match: C6SVU9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 9.472e-46
Identity = 95/127 (74.80%), Postives = 111/127 (87.40%), Query Frame = 3
Query:    6 ESERENLTSDGTSFNTNNQREILKAIEVVERDSLAIAQSFTSVFEALRLSLSQSTDTSIHHIQCFADAAGHLQESVLDAATKGNRYINSCLKLNEEMKNVDSLASQLKILRRHVDVLDSAVNKLLHV 386
            E+++E   SDG +FN  NQ  I +AIEVVERDSLAIAQSFTS+F +LRL+LS+ST TS+HH+QCF DA G LQESVLDAATKGNRYINSCL+LNEEMK+VD LASQLKILR+HVD LD+AVNKLLH+
Sbjct:   23 ETQKEIPISDGIAFN--NQSAIFQAIEVVERDSLAIAQSFTSLFASLRLALSESTSTSLHHMQCFTDATGRLQESVLDAATKGNRYINSCLRLNEEMKSVDGLASQLKILRKHVDALDAAVNKLLHI 147          
BLAST of Pisum_sativum_v1_Contig1382 vs. TrEMBL
Match: B9GKH3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_815084 PE=4 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.762e-37
Identity = 78/108 (72.22%), Postives = 94/108 (87.04%), Query Frame = 3
Query:   57 NQREILKAIEVVERDSLAIAQSFTSVFEALRLSLSQSTDTSIHHIQCFADAAGHLQESVLDAATKGNRYINSCLKLNEEMKNVDSLASQLKILRRHVDVLDSAVNKLL 380
            NQ EI KA+E++ERDSLAIA SFTS+F +LR +LS++T TS+ H+QCF DA   LQESVLDAATKGNRYINSC++LNEEMK +D+LA+QLK LRR+VDVLDSAV KLL
Sbjct:   44 NQGEIFKALEIIERDSLAIAGSFTSLFASLRFALSEATSTSVDHMQCFGDATARLQESVLDAATKGNRYINSCMRLNEEMKGIDTLATQLKNLRRNVDVLDSAVTKLL 151          
BLAST of Pisum_sativum_v1_Contig1382 vs. TrEMBL
Match: D7TVZ1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019751001 PE=4 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.516e-35
Identity = 75/104 (72.12%), Postives = 92/104 (88.46%), Query Frame = 3
Query:   66 EILKAIEVVERDSLAIAQSFTSVFEALRLSLSQSTDTSIHHIQCFADAAGHLQESVLDAATKGNRYINSCLKLNEEMKNVDSLASQLKILRRHVDVLDSAVNKL 377
            E+L+A+EVVERDS+AIA+SFTS+F +LRL+LS+ T +S+ H++CF DAAG LQES LDAAT+GNRYINSCL+LNEEMK VD LA QLKILRR+VD LDS VN+L
Sbjct:   42 ELLRALEVVERDSVAIAESFTSLFASLRLALSEVTSSSVDHMRCFNDAAGRLQESALDAATRGNRYINSCLRLNEEMKGVDGLAMQLKILRRNVDALDSGVNRL 145          
BLAST of Pisum_sativum_v1_Contig1382 vs. TrEMBL
Match: C5X8K7_SORBI (Putative uncharacterized protein Sb02g033360 OS=Sorghum bicolor GN=Sb02g033360 PE=4 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.591e-27
Identity = 60/108 (55.56%), Postives = 85/108 (78.70%), Query Frame = 3
Query:   63 REILKAIEVVERDSLAIAQSFTSVFEALRLSLSQSTDTSIHHIQCFADAAGHLQESVLDAATKGNRYINSCLKLNEEMKNVDSLASQLKILRRHVDVLDSAVNKLLHV 386
            RE+  A+E VERD+ AIA+S+ S+F +LR++LS  T TS  +++C  D  G LQES L+A++KGN+YINSCL+LNEEM+ ++SLA QLKILR++VD LD  V++LL +
Sbjct:   54 REVAAAMEAVERDAAAIAESYASLFASLRVALSNVTSTSAENMECLGDVVGRLQESALEASSKGNKYINSCLRLNEEMRGLESLAMQLKILRKNVDSLDLVVSQLLRL 161          
BLAST of Pisum_sativum_v1_Contig1382 vs. TrEMBL
Match: Q7EYI3_ORYSJ (Os07g0483400 protein OS=Oryza sativa subsp. japonica GN=OJ1136_F08.108 PE=4 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.773e-27
Identity = 60/108 (55.56%), Postives = 84/108 (77.78%), Query Frame = 3
Query:   63 REILKAIEVVERDSLAIAQSFTSVFEALRLSLSQSTDTSIHHIQCFADAAGHLQESVLDAATKGNRYINSCLKLNEEMKNVDSLASQLKILRRHVDVLDSAVNKLLHV 386
            RE+  A+E VERD  AI+ S+ S+F +LR++L+  T TS  +++C  D  G LQES L+A++KGN+YINSCL+LNEEM+ ++SLA QLKILR++VD LD AVN+LL +
Sbjct:   37 RELAAAMEAVERDVAAISDSYASLFASLRVALANVTSTSAENMECLGDVVGRLQESALEASSKGNKYINSCLRLNEEMRGLESLAMQLKILRKNVDSLDLAVNQLLRL 144          
BLAST of Pisum_sativum_v1_Contig1382 vs. TrEMBL
Match: A9NTE6_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.336e-26
Identity = 56/105 (53.33%), Postives = 82/105 (78.10%), Query Frame = 3
Query:   66 EILKAIEVVERDSLAIAQSFTSVFEALRLSLSQSTDTSIHHIQCFADAAGHLQESVLDAATKGNRYINSCLKLNEEMKNVDSLASQLKILRRHVDVLDSAVNKLL 380
            +++ A+E+VE+D+  +A S TS+  +LRL+LSQ T +S+ H++C+ D AG +QES LDA +KGNR+IN+C++LNEEMK + SLA+QLK+LRR  D LDS V + L
Sbjct:   47 DLVMALEIVEKDACEVAGSLTSLLSSLRLALSQVTGSSVEHMRCYNDVAGQVQESALDATSKGNRFINACMRLNEEMKGMGSLAAQLKLLRRTADNLDSLVTRYL 151          
BLAST of Pisum_sativum_v1_Contig1382 vs. TrEMBL
Match: B9RCC4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1686860 PE=4 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.204e-24
Identity = 55/75 (73.33%), Postives = 69/75 (92.00%), Query Frame = 3
Query:   57 NQREILKAIEVVERDSLAIAQSFTSVFEALRLSLSQSTDTSIHHIQCFADAAGHLQESVLDAATKGNRYINSCLK 281
            NQ+EI +A+EVVERDS+AIA+SFT++F +LRL+LS+ T+TS+ H+QCF DAAG LQESVLDAATKGNRYINSCL+
Sbjct:   32 NQKEIFRAVEVVERDSVAIAESFTALFASLRLALSEVTNTSLDHMQCFGDAAGRLQESVLDAATKGNRYINSCLR 106          
BLAST of Pisum_sativum_v1_Contig1382 vs. TrEMBL
Match: B6TR44_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.007e-20
Identity = 47/86 (54.65%), Postives = 67/86 (77.91%), Query Frame = 3
Query:   69 ILKAIEVVERDSLAIAQSFTSVFEALRLSLSQSTDTSIHHIQCFADAAGHLQESVLDAATKGNRYINSCLKLNEEMKNVDSLASQL 326
            +  A+E VERD+ AIA+S+ S+F +LR++LS  T TS  +++C  D  G LQES L+A++KGN+YINSCL+LNEEM+ ++SLA QL
Sbjct:   55 VAAAMEAVERDAAAIAESYASLFASLRVALSNVTSTSAENMECLGDVVGRLQESALEASSKGNKYINSCLRLNEEMRGLESLAMQL 140          
BLAST of Pisum_sativum_v1_Contig1382 vs. TrEMBL
Match: O65484_ARATH (Putative uncharacterized protein AT4g23330 OS=Arabidopsis thaliana GN=F21P8.220 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.835e-20
Identity = 48/76 (63.16%), Postives = 63/76 (82.89%), Query Frame = 3
Query:   57 NQREILKAIEVVERDSLAIAQSFTSVFEALRLSLSQSTDTSIHHIQCFADAAGHLQESVLDAATKGNRYINSCLKL 284
            NQ EILK +  VE+DS AIA+SF+S+F +LR +LS++T +S+ H+ CF +AAG LQE+ LDAATKGNRYINSCL+L
Sbjct:   37 NQGEILKTLATVEKDSQAIAESFSSLFVSLRSTLSEATGSSVDHMACFGEAAGRLQENALDAATKGNRYINSCLRL 112          
BLAST of Pisum_sativum_v1_Contig1382 vs. TrEMBL
Match: A9S0G9_PHYPA (Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_49259 PE=4 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.872e-18
Identity = 45/90 (50.00%), Postives = 70/90 (77.78%), Query Frame = 3
Query:   81 IEVVERDSLAIAQSFTSVFEALRLSLSQSTDTSIHHIQCFADAAGHLQESVLDAATKGNRYINSCLKLNEEMKNVDSLASQLKILRRHVD 350
            ++ VE D+ A+A S   +F +L+ +LS+ T +S+ H++C ++AAG LQ++ +DAA KG R+IN+CL+LNEEMK+V +LA+QLK LR+ VD
Sbjct:    1 VKAVEDDAKAVAGSLVGLFSSLQSALSEVTGSSVDHMKCHSEAAGLLQDASIDAAAKGQRFINACLRLNEEMKSVGNLAAQLKALRQVVD 90          
BLAST of Pisum_sativum_v1_Contig1382 vs. TAIR peptide
Match: AT4G23330.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2365 (InterPro:IPR019314). | chr4:12192136-12193383 FORWARD LENGTH=147)

HSP 1 Score: 143.28 bits (360), Expect = 1.101e-34
Identity = 70/108 (64.81%), Postives = 93/108 (86.11%), Query Frame = 3
Query:   57 NQREILKAIEVVERDSLAIAQSFTSVFEALRLSLSQSTDTSIHHIQCFADAAGHLQESVLDAATKGNRYINSCLKLNEEMKNVDSLASQLKILRRHVDVLDSAVNKLL 380
            NQ EILK +  VE+DS AIA+SF+S+F +LR +LS++T +S+ H+ CF +AAG LQE+ LDAATKGNRYINSCL+LNEE+K V++LA++LK LR++VDVLD+AVNKLL
Sbjct:   37 NQGEILKTLATVEKDSQAIAESFSSLFVSLRSTLSEATGSSVDHMACFGEAAGRLQENALDAATKGNRYINSCLRLNEEIKGVENLAARLKHLRKNVDVLDTAVNKLL 144          
BLAST of Pisum_sativum_v1_Contig1382 vs. TAIR peptide
Match: AT4G23330.1 (| Symbols: | BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1); Has 63 Blast hits to 55 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:12192136-12194745 FORWARD LENGTH=270)

HSP 1 Score: 101.293 bits (251), Expect = 4.797e-22
Identity = 48/76 (63.16%), Postives = 63/76 (82.89%), Query Frame = 3
Query:   57 NQREILKAIEVVERDSLAIAQSFTSVFEALRLSLSQSTDTSIHHIQCFADAAGHLQESVLDAATKGNRYINSCLKL 284
            NQ EILK +  VE+DS AIA+SF+S+F +LR +LS++T +S+ H+ CF +AAG LQE+ LDAATKGNRYINSCL+L
Sbjct:   37 NQGEILKTLATVEKDSQAIAESFSSLFVSLRSTLSEATGSSVDHMACFGEAAGRLQENALDAATKGNRYINSCLRL 112          
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig1382 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6SVU9_SOYBN9.472e-4674.80Putative uncharacterized protein OS=Glycine max PE... [more]
B9GKH3_POPTR2.762e-3772.22Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TVZ1_VITVI1.516e-3572.12Whole genome shotgun sequence of line PN40024, sca... [more]
C5X8K7_SORBI2.591e-2755.56Putative uncharacterized protein Sb02g033360 OS=So... [more]
Q7EYI3_ORYSJ5.773e-2755.56Os07g0483400 protein OS=Oryza sativa subsp. japoni... [more]
A9NTE6_PICSI8.336e-2653.33Putative uncharacterized protein OS=Picea sitchens... [more]
B9RCC4_RICCO1.204e-2473.33Putative uncharacterized protein OS=Ricinus commun... [more]
B6TR44_MAIZE4.007e-2054.65Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
O65484_ARATH6.835e-2063.16Putative uncharacterized protein AT4g23330 OS=Arab... [more]
A9S0G9_PHYPA2.872e-1850.00Predicted protein (Fragment) OS=Physcomitrella pat... [more]
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BLAST of Pisum_sativum_v1_Contig1382 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G23330.21.101e-3464.81| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT4G23330.14.797e-2263.16| Symbols: | BEST Arabidopsis thaliana protein ma... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 10..21
score
NoneNo IPR availableSEGsegsegcoord: 27..41
score
NoneNo IPR availableSEGsegsegcoord: 61..77
score
IPR019314Protein of unknown function DUF2365PFAMPF10157DUF2365coord: 29..121
score: 9.5

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig1382 ID=Pisum_sativum_v1_Contig1382; Name=Pisum_sativum_v1_Contig1382; organism=Pisum sativum; type=contig; length=654bp
AATCAGAATCAGAAAGAGAAAACCTAACATCAGATGGTACCTCCTTCAAT
ACCAACAATCAGAGAGAAATATTGAAAGCAATCGAAGTTGTCGAACGAGA
TTCCCTCGCCATTGCTCAGAGCTTCACTTCCGTCTTCGAAGCACTCCGAT
TGTCCCTCTCTCAATCCACCGACACCTCAATTCATCATATTCAATGCTTC
GCCGATGCCGCCGGTCATCTTCAAGAATCCGTGCTTGATGCAGCGACTAA
GGGGAATCGGTATATAAATTCGTGTCTCAAATTGAATGAGGAGATGAAGA
ACGTTGATAGTCTAGCATCACAATTAAAAATCCTGAGAAGGCATGTAGAT
GTTCTAGACTCGGCTGTTAACAAGCTTCTTCATGTCTCTTGACACCTGGG
AATGAGATTCAGTCCTGTACAAGGTTTCTTTCTATATATCCCATAGCAAC
CTTTTAGATGAAGAATTTGAAAAATGTATGCATCTGTATGTATTTGTCAT
TTCATATATTGTGCTGGTTAGTGTTGTGCTAACAGAGCAACATTATTTGG
ACAAGTAATATAAGGGCAGAGAATATTGTGCTTGTGATTTAAATTGTTAG
GCGCTTGTTTCCAAGTTACTATGTGTGGGAATAGTAAGTCAAAACTAATT
ATAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR019314BORCS6