Pisum_sativum_v1_Contig142

Contig Overview
NamePisum_sativum_v1_Contig142
Unique NamePisum_sativum_v1_Contig142
Typecontig
OrganismPisum sativum (pea)
Sequence length646
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
FG531496ESTFG531496:1..393 +
FG531866ESTFG531866:52..520 +
FG537704ESTFG537704:1..648 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
KEGG analysis for Pisum sativum unigene v12011-01-05
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
FG531496FG531496Pisum sativumEST
FG531866FG531866Pisum sativumEST
FG537704FG537704Pisum sativumEST


Homology
[Close]
BLAST of Pisum_sativum_v1_Contig142 vs. SwissProt
Match: MCM3_ARATH (DNA replication licensing factor MCM3 homolog OS=Arabidopsis thaliana GN=MCM3 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.616e-18
Identity = 49/103 (47.57%), Postives = 68/103 (66.02%), Query Frame = 3 
Query:    6 NGPDRGSKSKRDSTSDAMEVDDTSAAQPAVGLTPERIEAFNSLFGQHMRANRLDQISIADIEDVINRG--ADSTYSSADILLLLEKLQEDNRLMIVAGMVHMI 308
            +G +  + +    T+D MEVD+ S  Q +  ++  RIE F  +FGQHMR +RLD ISIADIE V+N      S YS+ +I+ LLEKLQ+DN++MI  G VH+I
Sbjct:  674 DGAENDTANVDSETADPMEVDEPSVEQFSGTVSAARIETFERVFGQHMRTHRLDDISIADIETVVNNNGVGASRYSADEIMALLEKLQDDNKVMISDGKVHII 776
[Close]
BLAST of Pisum_sativum_v1_Contig142 vs. SwissProt
Match: MCM32_MAIZE (DNA replication licensing factor MCM3 homolog 2 OS=Zea mays GN=ROA2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.574e-13
Identity = 39/89 (43.82%), Postives = 61/89 (68.54%), Query Frame = 3 
Query:   42 STSDAMEVDDTSAAQPAVGLTPERIEAFNSLFGQHMRANRLDQISIADIEDVINRGADSTYSSADILLLLEKLQEDNRLMIVAGMVHMI 308
            S +D M+VD  S  Q    ++ ERIEAF +L GQH+ AN +DQ+SI DIE ++NR + + Y+ + +  +LE++Q+ NR+MI  G+V +I
Sbjct:  683 SGNDPMDVDVGSNDQ---NVSAERIEAFEALLGQHVLANHIDQMSIDDIEQMVNRESTAPYTRSQVEFILERMQDANRVMIRDGVVRII 768
[Close]
BLAST of Pisum_sativum_v1_Contig142 vs. SwissProt
Match: MCM31_MAIZE (DNA replication licensing factor MCM3 homolog 1 OS=Zea mays GN=ROA1 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.331e-12
Identity = 38/89 (42.70%), Postives = 61/89 (68.54%), Query Frame = 3 
Query:   42 STSDAMEVDDTSAAQPAVGLTPERIEAFNSLFGQHMRANRLDQISIADIEDVINRGADSTYSSADILLLLEKLQEDNRLMIVAGMVHMI 308
            S +D M+VD  S  Q    ++ ERIEAF +L GQH+ AN +DQ+SI +IE ++NR + + Y+ + +  +LE++Q+ NR+MI  G+V +I
Sbjct:  683 SGNDPMDVDVGSNDQ---NVSAERIEAFEALLGQHVLANHIDQMSIDEIEQMVNRESTAPYTRSQVEFILERMQDANRVMIRDGVVRII 768
[Close]
BLAST of Pisum_sativum_v1_Contig142 vs. SwissProt
Match: MCM33_MAIZE (DNA replication licensing factor MCM3 homolog 3 OS=Zea mays GN=ROA3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.965e-12
Identity = 37/89 (41.57%), Postives = 61/89 (68.54%), Query Frame = 3 
Query:   42 STSDAMEVDDTSAAQPAVGLTPERIEAFNSLFGQHMRANRLDQISIADIEDVINRGADSTYSSADILLLLEKLQEDNRLMIVAGMVHMI 308
            S +D M+VD  S  Q    ++ ERI+AF +L GQH+ AN +DQ+SI +IE ++NR + + Y+ + +  +LE++Q+ NR+MI  G+V +I
Sbjct:  683 SGNDPMDVDVGSNDQ---NVSAERIQAFEALLGQHVLANHIDQMSIDEIEQMVNRESTAPYTRSQVEFILERMQDANRVMIRDGVVRII 768
[Close]
BLAST of Pisum_sativum_v1_Contig142 vs. TrEMBL
Match: Q9ZRV3_PEA (MCM3 protein (Fragment) OS=Pisum sativum GN=MCM3 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.767e-48
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 3 
Query:    3 NNGPDRGSKSKRDSTSDAMEVDDTSAAQPAVGLTPERIEAFNSLFGQHMRANRLDQISIADIEDVINRGADSTYSSADILLLLEKLQEDNRLMIVAGMVHMIS 311
            NNGPDRGSKSKRDSTS+AME+DDTSAA PAVGLTPERIEAFNSLFGQHMRAN LDQISIADIEDVINRGADSTYSSADILLLLEKLQEDNRLMIVAGMVHMIS
Sbjct:  554 NNGPDRGSKSKRDSTSEAMELDDTSAAPPAVGLTPERIEAFNSLFGQHMRANPLDQISIADIEDVINRGADSTYSSADILLLLEKLQEDNRLMIVAGMVHMIS 656
[Close]
BLAST of Pisum_sativum_v1_Contig142 vs. TrEMBL
Match: Q8H1A2_PEA (Mini-chromosome maintenance protein MCM3 OS=Pisum sativum GN=mcm3 PE=2 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 9.767e-48
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 3 
Query:    3 NNGPDRGSKSKRDSTSDAMEVDDTSAAQPAVGLTPERIEAFNSLFGQHMRANRLDQISIADIEDVINRGADSTYSSADILLLLEKLQEDNRLMIVAGMVHMIS 311
            NNGPDRGSKSKRDSTS+AME+DDTSAA PAVGLTPERIEAFNSLFGQHMRAN LDQISIADIEDVINRGADSTYSSADILLLLEKLQEDNRLMIVAGMVHMIS
Sbjct:  608 NNGPDRGSKSKRDSTSEAMELDDTSAAPPAVGLTPERIEAFNSLFGQHMRANPLDQISIADIEDVINRGADSTYSSADILLLLEKLQEDNRLMIVAGMVHMIS 710
[Close]
BLAST of Pisum_sativum_v1_Contig142 vs. TrEMBL
Match: D7TK30_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021426001 PE=4 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.625e-18
Identity = 51/99 (51.52%), Postives = 72/99 (72.73%), Query Frame = 3 
Query:   15 DRGSKSKRDSTSDAMEVDDTSAAQPAVGLTPERIEAFNSLFGQHMRANRLDQISIADIEDVINRGADSTYSSADILLLLEKLQEDNRLMIVAG-MVHMI 308
            D  S  +  +T+DAMEVD + AA  +  ++ ER+EAF+S+FGQH+RAN +D ISIAD+E V+N GA   YS A+IL LL++L++ NRLMI    +VH+I
Sbjct:  678 DHDSADREGATADAMEVDASPAAPFSGNISSERVEAFDSVFGQHIRANHVDLISIADVEKVVNSGAPVQYSRAEILFLLKRLEDVNRLMIDDNDVVHII 776
[Close]
BLAST of Pisum_sativum_v1_Contig142 vs. TrEMBL
Match: Q84VV9_ARATH (At5g46280 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.227e-17
Identity = 49/103 (47.57%), Postives = 68/103 (66.02%), Query Frame = 3 
Query:    6 NGPDRGSKSKRDSTSDAMEVDDTSAAQPAVGLTPERIEAFNSLFGQHMRANRLDQISIADIEDVINRG--ADSTYSSADILLLLEKLQEDNRLMIVAGMVHMI 308
            +G +  + +    T+D MEVD+ S  Q +  ++  RIE F  +FGQHMR +RLD ISIADIE V+N      S YS+ +I+ LLEKLQ+DN++MI  G VH+I
Sbjct:   45 DGAENDTANVDSETADPMEVDEPSVEQFSGTVSAARIETFERVFGQHMRTHRLDDISIADIETVVNNNGVGASRYSADEIMALLEKLQDDNKVMISDGKVHII 147
[Close]
BLAST of Pisum_sativum_v1_Contig142 vs. TrEMBL
Match: Q0WSU1_ARATH (MCM3 homolog (Fragment) OS=Arabidopsis thaliana GN=At5g46280 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.227e-17
Identity = 49/103 (47.57%), Postives = 68/103 (66.02%), Query Frame = 3 
Query:    6 NGPDRGSKSKRDSTSDAMEVDDTSAAQPAVGLTPERIEAFNSLFGQHMRANRLDQISIADIEDVINRG--ADSTYSSADILLLLEKLQEDNRLMIVAGMVHMI 308
            +G +  + +    T+D MEVD+ S  Q +  ++  RIE F  +FGQHMR +RLD ISIADIE V+N      S YS+ +I+ LLEKLQ+DN++MI  G VH+I
Sbjct:   46 DGAENDTANVDSETADPMEVDEPSVEQFSGTVSAARIETFERVFGQHMRTHRLDDISIADIETVVNNNGVGASRYSADEIMALLEKLQDDNKVMISDGKVHII 148
[Close]
BLAST of Pisum_sativum_v1_Contig142 vs. TrEMBL
Match: D7MRY9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_494345 PE=4 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.521e-16
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 3 
Query:    6 NGPDRGSKSKRDSTSDAMEVDDTSAAQPAVGLTPERIEAFNSLFGQHMRANRLDQISIADIEDVINRG--ADSTYSSADILLLLEKLQEDNRLMIVAGMVHMI 308
            NG +  + +    T+D MEVD+    Q +  ++  RIE F  +FGQHMR +RLD ISIADIE V+N      S +S+ +I+ LLEKLQ+DN++MI  G VH+I
Sbjct:  674 NGEENDAANVDSETADPMEVDEPPVEQFSGTVSAARIETFERVFGQHMRTHRLDDISIADIETVVNNNGVGASRFSADEIMALLEKLQDDNKVMISDGKVHII 776
[Close]
BLAST of Pisum_sativum_v1_Contig142 vs. TrEMBL
Match: B9S137_RICCO (DNA replication licensing factor MCM3, putative OS=Ricinus communis GN=RCOM_0633290 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.388e-16
Identity = 50/106 (47.17%), Postives = 67/106 (63.21%), Query Frame = 3 
Query:   18 RGSKSKRDS---------TSDAMEVDDTSAAQPAVGLTPERIEAFNSLFGQHMRANRLDQISIADIEDVINRGADSTYSSADILLLLEKLQEDNRLMIVAGMVHMI 308
            R  +S RD          T+DAMEVDD  A Q    L+PER+EAFNS F +HMR   LD I+I D+E+ IN G  + YS  +I+ LL+KL ++N++MI  G VHM+
Sbjct:  665 RSDRSDRDGHTDVEMGGPTADAMEVDDPPAEQATTELSPERVEAFNSAFREHMR--YLDSITIDDLENAIN-GGGTQYSREEIMFLLQKLHDENKVMIANGKVHMV 767
[Close]
BLAST of Pisum_sativum_v1_Contig142 vs. TrEMBL
Match: B9H3Z8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1076201 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.196e-15
Identity = 49/103 (47.57%), Postives = 68/103 (66.02%), Query Frame = 3 
Query:    3 NNGPDRGSKSKRDSTSDAMEVDDTSAAQPAVG-LTPERIEAFNSLFGQHMRANRLDQISIADIEDVINRGADSTYSSADILLLLEKLQEDNRLMIVAGMVHMI 308
            N+  D  +  +  ST+DAMEVDD   A+ A   L+ ERIEAFNS F +HMR   +D I+I D+E V+N G    YS  +I+LLL+KL ++N++MI  G VHM+
Sbjct:  660 NDADDHTTADRDGSTTDAMEVDDHPPAEQATAELSLERIEAFNSAFREHMRY--MDSITIDDLEKVVNTGG-VPYSREEIMLLLQKLHDENKVMIADGKVHMV 759
[Close]
BLAST of Pisum_sativum_v1_Contig142 vs. TrEMBL
Match: Q0DHC4_ORYSJ (Os05g0476200 protein OS=Oryza sativa subsp. japonica GN=Os05g0476200 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.876e-12
Identity = 40/91 (43.96%), Postives = 60/91 (65.93%), Query Frame = 3 
Query:   36 RDSTSDAMEVDDTSAAQPAVGLTPERIEAFNSLFGQHMRANRLDQISIADIEDVINRGADSTYSSADILLLLEKLQEDNRLMIVAGMVHMI 308
            R S +D M+VD  +A+     +  ERIEAF ++ GQH+ AN LDQISI +IE  +NR A + Y+   +  +LE++Q+ NR+MI  G+V +I
Sbjct:  681 RSSGNDPMDVDVGNASNDQ-DVPAERIEAFEAILGQHVLANHLDQISIDEIEQTVNREAAAPYNRRQVEFILERMQDANRIMIRDGIVRII 770
[Close]
BLAST of Pisum_sativum_v1_Contig142 vs. TrEMBL
Match: B9FKR8_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_18914 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.876e-12
Identity = 40/91 (43.96%), Postives = 60/91 (65.93%), Query Frame = 3 
Query:   36 RDSTSDAMEVDDTSAAQPAVGLTPERIEAFNSLFGQHMRANRLDQISIADIEDVINRGADSTYSSADILLLLEKLQEDNRLMIVAGMVHMI 308
            R S +D M+VD  +A+     +  ERIEAF ++ GQH+ AN LDQISI +IE  +NR A + Y+   +  +LE++Q+ NR+MI  G+V +I
Sbjct:  697 RSSGNDPMDVDVGNASNDQ-DVPAERIEAFEAILGQHVLANHLDQISIDEIEQTVNREAAAPYNRRQVEFILERMQDANRIMIRDGIVRII 786
[Close]
BLAST of Pisum_sativum_v1_Contig142 vs. TAIR peptide
Match: AT5G46280.1 (| Symbols: MCM3 | Minichromosome maintenance (MCM2/3/5) family protein | chr5:18769902-18773606 REVERSE LENGTH=776)

HSP 1 Score: 91.6633 bits (226), Expect = 3.707e-19
Identity = 49/103 (47.57%), Postives = 68/103 (66.02%), Query Frame = 3 
Query:    6 NGPDRGSKSKRDSTSDAMEVDDTSAAQPAVGLTPERIEAFNSLFGQHMRANRLDQISIADIEDVINRG--ADSTYSSADILLLLEKLQEDNRLMIVAGMVHMI 308
            +G +  + +    T+D MEVD+ S  Q +  ++  RIE F  +FGQHMR +RLD ISIADIE V+N      S YS+ +I+ LLEKLQ+DN++MI  G VH+I
Sbjct:  674 DGAENDTANVDSETADPMEVDEPSVEQFSGTVSAARIETFERVFGQHMRTHRLDDISIADIETVVNNNGVGASRYSADEIMALLEKLQDDNKVMISDGKVHII 776
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig142 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
MCM3_ARATH3.616e-1847.57DNA replication licensing factor MCM3 homolog OS=A... [more]
MCM32_MAIZE4.574e-1343.82DNA replication licensing factor MCM3 homolog 2 OS... [more]
MCM31_MAIZE1.331e-1242.70DNA replication licensing factor MCM3 homolog 1 OS... [more]
MCM33_MAIZE2.965e-1241.57DNA replication licensing factor MCM3 homolog 3 OS... [more]
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BLAST of Pisum_sativum_v1_Contig142 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q9ZRV3_PEA9.767e-4896.12MCM3 protein (Fragment) OS=Pisum sativum GN=MCM3 P... [more]
Q8H1A2_PEA9.767e-4896.12Mini-chromosome maintenance protein MCM3 OS=Pisum ... [more]
D7TK30_VITVI1.625e-1851.52Whole genome shotgun sequence of line PN40024, sca... [more]
Q84VV9_ARATH5.227e-1747.57At5g46280 OS=Arabidopsis thaliana PE=2 SV=1[more]
Q0WSU1_ARATH5.227e-1747.57MCM3 homolog (Fragment) OS=Arabidopsis thaliana GN... [more]
D7MRY9_ARALY1.521e-1646.60Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9S137_RICCO3.388e-1647.17DNA replication licensing factor MCM3, putative OS... [more]
B9H3Z8_POPTR2.196e-1547.57Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q0DHC4_ORYSJ3.876e-1243.96Os05g0476200 protein OS=Oryza sativa subsp. japoni... [more]
B9FKR8_ORYSJ3.876e-1243.96Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of Pisum_sativum_v1_Contig142 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G46280.13.707e-1947.57| Symbols: MCM3 | Minichromosome maintenance (MCM2... [more]
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Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig142 ID=Pisum_sativum_v1_Contig142; Name=Pisum_sativum_v1_Contig142; organism=Pisum sativum; type=contig; length=646bp
AAAACAATGGTCCTGATCGTGGTTCTAAAAGCAAAAGAGACTCAACATCC
GATGCCATGGAAGTAGATGATACCTCAGCAGCCCAACCAGCTGTTGGTCT
CACTCCTGAAAGAATTGAAGCATTCAATTCCCTATTTGGTCAGCATATGC
GTGCCAATCGCTTGGATCAAATATCTATTGCTGACATAGAAGATGTTATC
AATAGAGGGGCTGATTCTACTTACAGCTCGGCAGATATATTGCTCCTGTT
AGAGAAATTGCAAGAAGACAATAGATTAATGATAGTTGCTGGAATGGTGC
ATATGATATCATAAATGTAAGATCAGCACAATATCTCAAACACAGATTCT
GAGGGAGCAAACTTTTCCGGTAGGGTAGTAAGCAGTTTACATTGGTGGGA
GACTTGACAGAGATTTCTGATTTTCAATGTTAATTTGTTCACTTGGGAGA
GAGCTATCGGCTAAGACATCAACAAATACATAACAAATGCTATGGTGTTG
ACATATTTATAACTGAATTATTTGGGTCATAAGAACCTCTGATCCCCTCA
AAATTTATTGGTTGTCTATACTTGGCACTCCCTACCTTTATGCATTTTAG
TGTTGCTAACCCTCATCTATTCATGTGTAAACCATGTTTCTAGAAT
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