Pisum_sativum_v1_Contig1629

Contig Overview
NamePisum_sativum_v1_Contig1629
Unique NamePisum_sativum_v1_Contig1629
Typecontig
OrganismPisum sativum (pea)
Sequence length664
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
FG532035ESTFG532035:11..258 +
FG532056ESTFG532056:11..492 +
FG529533ESTFG529533:1..586 +
FG529250ESTFG529250:1..664 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
FG532035FG532035Pisum sativumEST
FG532056FG532056Pisum sativumEST
FG529533FG529533Pisum sativumEST
FG529250FG529250Pisum sativumEST


Homology
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BLAST of Pisum_sativum_v1_Contig1629 vs. TrEMBL
Match: C6TJQ9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.997e-47
Identity = 93/132 (70.45%), Postives = 108/132 (81.82%), Query Frame = 3 
Query:    3 PHRHKTTQPVSPNRVTTPRTTKQDLTVKVESPKKMEPID----CRTPLAKVVADCAKRWFQDTLKEAKGGDSTMQVLVGQMYYSGYGVPRDPQKGHAWINRASKSKNSVWKVSQKQPGYRASDSDSCDLENK 386
            P+R K   P SPNRV TPR+      VKVE  KKMEP++    CRTPLAKVV+DC+KRWFQDTLKEAK GD+TMQVLVGQMYYSGYGV RDPQKGHAWI++AS+++NSVWK+  K+PGYRASD DSC+LE K
Sbjct:   24 PNRPKRALPRSPNRVATPRSANP-FGVKVEPAKKMEPLEEEQQCRTPLAKVVSDCSKRWFQDTLKEAKAGDTTMQVLVGQMYYSGYGVARDPQKGHAWISKASRNRNSVWKLCGKRPGYRASDFDSCELEEK 154
[Close]
BLAST of Pisum_sativum_v1_Contig1629 vs. TrEMBL
Match: B9HYJ0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_833745 PE=4 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.645e-32
Identity = 71/125 (56.80%), Postives = 89/125 (71.20%), Query Frame = 3 
Query:    3 PHRHKTTQPVSPNRVTTPRTTKQDLTVK-VESPKKMEPIDCRTPLAKVVADCAKRWFQDTLKEAKGGDSTMQVLVGQMYYSGYGVPRDPQKGHAWINRASKSKNSVWKVSQKQPGYRASDSDSCD 374
            P   ++  PV P+R +  R   + L VK +E    +     R PL +VV+DCAKRWF+DTLKEAK GD +MQVLVGQMY++GYGVP+D +KG AWI+RASK + SVWKVS K+PGY  SDSDS D
Sbjct:   23 PRHKRSIVPVVPSRPSEVRVDSERLKVKKMEESSLILDGQKRVPLGQVVSDCAKRWFEDTLKEAKTGDISMQVLVGQMYFNGYGVPKDVEKGSAWISRASKRRASVWKVSNKRPGYNGSDSDSED 147
[Close]
BLAST of Pisum_sativum_v1_Contig1629 vs. TrEMBL
Match: B9S496_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0688340 PE=4 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.952e-30
Identity = 61/82 (74.39%), Postives = 71/82 (86.59%), Query Frame = 3 
Query:  123 RTPLAKVVADCAKRWFQDTLKEAKGGDSTMQVLVGQMYYSGYGVPRDPQKGHAWINRASKSKNSVWKVSQKQPGYRASDSDS 368
            R PL+ VV+DC +RWFQDTLKEAK GD +MQVLVGQMY++GYG+P+D QKG AWINRASKS+ S WKVS K+PGY ASDSDS
Sbjct:   67 RLPLSNVVSDCVRRWFQDTLKEAKAGDISMQVLVGQMYFNGYGIPKDSQKGRAWINRASKSRVSAWKVSDKRPGYAASDSDS 148
[Close]
BLAST of Pisum_sativum_v1_Contig1629 vs. TrEMBL
Match: B9HHW8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_564094 PE=4 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.679e-30
Identity = 62/87 (71.26%), Postives = 74/87 (85.06%), Query Frame = 3 
Query:  123 RTPLAKVVADCAKRWFQDTLKEAKGGDSTMQVLVGQMYYSGYGVPRDPQKGHAWINRASKSKNSVWKVSQKQPGYRASDSDSCDLEN 383
            R PL  VV+DCAKRWFQDTLKEAK GD TMQVLVGQMY++GYGVP+D +KG  W++RASK + SVWKVS K+PGY ASDSDS ++E+
Sbjct:   13 RVPLGLVVSDCAKRWFQDTLKEAKTGDITMQVLVGQMYFNGYGVPKDVEKGSDWMSRASKRRMSVWKVSDKRPGYNASDSDSDEVED 99
[Close]
BLAST of Pisum_sativum_v1_Contig1629 vs. TrEMBL
Match: Q84W16_ARATH (Putative uncharacterized protein At5g05360 (Fragment) OS=Arabidopsis thaliana GN=At5g05360 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.807e-29
Identity = 61/89 (68.54%), Postives = 73/89 (82.02%), Query Frame = 3 
Query:  108 EPIDCRTPLAKVVADCAKRWFQDTLKEAKGGDSTMQVLVGQMYYSGYGVPRDPQKGHAWINRASKSKNSVWKVSQKQPGYRASDSDSCD 374
            +PI+ R PLA+VV DC +RWFQDTLKEAK GD  MQVLVGQMY SGYG+P+D  KG AWIN+AS++++S W+VS K PGY ASDSDS D
Sbjct:   67 DPIN-RVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPKDENKGRAWINKASRTRSSAWQVSDKPPGYNASDSDSND 154
[Close]
BLAST of Pisum_sativum_v1_Contig1629 vs. TrEMBL
Match: C6T5J9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.278e-29
Identity = 59/89 (66.29%), Postives = 70/89 (78.65%), Query Frame = 3 
Query:  123 RTPLAKVVADCAKRWFQDTLKEAKGGDSTMQVLVGQMYYSGYGVPRDPQKGHAWINRASKSKNSVWKVSQKQPGYRASDSDSCDLENKS 389
            R  L++VVADC KRWF+D LKEAK GD  MQVLVGQMYY GYGVPRD QKG  W+ +AS++++SVWKV  K PGY ASDSDS +L+  S
Sbjct:   12 RVALSEVVADCVKRWFRDALKEAKAGDINMQVLVGQMYYGGYGVPRDAQKGRVWLTKASRTRSSVWKVGDKHPGYNASDSDSDELKEDS 100
[Close]
BLAST of Pisum_sativum_v1_Contig1629 vs. TrEMBL
Match: C6T4R5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.200e-29
Identity = 61/99 (61.62%), Postives = 75/99 (75.76%), Query Frame = 3 
Query:   87 VESPKKMEPIDCRTPLAKVVADCAKRWFQDTLKEAKGGDSTMQVLVGQMYYSGYGVPRDPQKGHAWINRASKSKNSVWKVSQKQPGYRASDSDSCDLEN 383
            +ES   +E    R PL+ VVADC KRWF+DTLKEAK GD  MQVLVGQMYY GYGVPRD QKG  W+ +AS+ ++SVW+V  K+PGY ASDS+S + E+
Sbjct:    1 MESSSGIESTGGRAPLSGVVADCVKRWFKDTLKEAKAGDVNMQVLVGQMYYHGYGVPRDAQKGRIWLTKASRVRSSVWRVGGKRPGYNASDSESDEEED 99
[Close]
BLAST of Pisum_sativum_v1_Contig1629 vs. TrEMBL
Match: B9NFJ6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1120203 PE=4 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.071e-28
Identity = 59/82 (71.95%), Postives = 68/82 (82.93%), Query Frame = 3 
Query:  123 RTPLAKVVADCAKRWFQDTLKEAKGGDSTMQVLVGQMYYSGYGVPRDPQKGHAWINRASKSKNSVWKVSQKQPGYRASDSDS 368
            R PL+ VV+DC KRWF+DTLKEAK GD  MQVLV QMYYSGYGVP+D QKG  W+ RAS++++ VWKVS KQPGY ASDSDS
Sbjct:   23 RVPLSDVVSDCIKRWFKDTLKEAKAGDINMQVLVSQMYYSGYGVPKDEQKGRIWMTRASRTRSWVWKVSNKQPGYNASDSDS 104
[Close]
BLAST of Pisum_sativum_v1_Contig1629 vs. TrEMBL
Match: D7LLK4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_345628 PE=4 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.827e-28
Identity = 62/120 (51.67%), Postives = 85/120 (70.83%), Query Frame = 3 
Query:   15 KTTQPVSP--NRVTTPRTTKQDLTVKVESPKKMEPIDCRTPLAKVVADCAKRWFQDTLKEAKGGDSTMQVLVGQMYYSGYGVPRDPQKGHAWINRASKSKNSVWKVSQKQPGYRASDSDS 368
            K+++P+ P  + + +P       T   E+ ++        PL+ VV+DCAKRWF+DTL+EAK G+ TMQVL+GQMYYSGYGVP+D +KG  WI +AS+ ++SVWKV  K+PGY ASDSDS
Sbjct:   23 KSSKPIRPISSSMDSPDKDSSATTTTSETSRRF------VPLSSVVSDCAKRWFKDTLEEAKAGNITMQVLLGQMYYSGYGVPKDAKKGRLWITKASRVRSSVWKVKDKRPGYNASDSDS 136
[Close]
BLAST of Pisum_sativum_v1_Contig1629 vs. TrEMBL
Match: O80906_ARATH (At2g38450 OS=Arabidopsis thaliana GN=At2g38450 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.546e-27
Identity = 56/80 (70.00%), Postives = 69/80 (86.25%), Query Frame = 3 
Query:  129 PLAKVVADCAKRWFQDTLKEAKGGDSTMQVLVGQMYYSGYGVPRDPQKGHAWINRASKSKNSVWKVSQKQPGYRASDSDS 368
            PL+ VV+DCAKRWF+DTL+EAK G+ TMQVL+GQMYYSGYGVP+D +KG  WI +AS+ ++SVWKV  K+PGY ASDSDS
Sbjct:   23 PLSSVVSDCAKRWFKDTLEEAKAGNITMQVLLGQMYYSGYGVPKDARKGRLWITKASRVRSSVWKVIDKRPGYNASDSDS 102
[Close]
BLAST of Pisum_sativum_v1_Contig1629 vs. TAIR peptide
Match: AT5G05360.1 (| Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G38450.1); Has 84 Blast hits to 84 proteins in 24 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr5:1588356-1589178 FORWARD LENGTH=163)

HSP 1 Score: 131.724 bits (330), Expect = 3.397e-31
Identity = 61/89 (68.54%), Postives = 73/89 (82.02%), Query Frame = 3 
Query:  108 EPIDCRTPLAKVVADCAKRWFQDTLKEAKGGDSTMQVLVGQMYYSGYGVPRDPQKGHAWINRASKSKNSVWKVSQKQPGYRASDSDSCD 374
            +PI+ R PLA+VV DC +RWFQDTLKEAK GD  MQVLVGQMY SGYG+P+D  KG AWIN+AS++++S W+VS K PGY ASDSDS D
Sbjct:   73 DPIN-RVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPKDENKGRAWINKASRTRSSAWQVSDKPPGYNASDSDSND 160
[Close]
BLAST of Pisum_sativum_v1_Contig1629 vs. TAIR peptide
Match: AT2G38450.1 (| Symbols: | CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G05360.1); Has 88 Blast hits to 88 proteins in 25 species: Archae - 0; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr2:16102016-16102683 FORWARD LENGTH=138)

HSP 1 Score: 127.102 bits (318), Expect = 8.366e-30
Identity = 61/119 (51.26%), Postives = 84/119 (70.59%), Query Frame = 3 
Query:   15 KTTQPVSP-NRVTTPRTTKQDLTVKVESPKKMEPIDCRTPLAKVVADCAKRWFQDTLKEAKGGDSTMQVLVGQMYYSGYGVPRDPQKGHAWINRASKSKNSVWKVSQKQPGYRASDSDS 368
            K+++P+ P + + +        T   E+ ++        PL+ VV+DCAKRWF+DTL+EAK G+ TMQVL+GQMYYSGYGVP+D +KG  WI +AS+ ++SVWKV  K+PGY ASDSDS
Sbjct:   23 KSSKPIRPISSMDSSDKDSSSTTTTSETTRRF------VPLSSVVSDCAKRWFKDTLEEAKAGNITMQVLLGQMYYSGYGVPKDARKGRLWITKASRVRSSVWKVIDKRPGYNASDSDS 135
[Close]
BLAST of Pisum_sativum_v1_Contig1629 vs. TAIR peptide
Match: AT5G05360.2 (| Symbols: | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G38450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:1588356-1589044 FORWARD LENGTH=153)

HSP 1 Score: 117.087 bits (292), Expect = 8.658e-27
Identity = 53/79 (67.09%), Postives = 65/79 (82.28%), Query Frame = 3 
Query:  108 EPIDCRTPLAKVVADCAKRWFQDTLKEAKGGDSTMQVLVGQMYYSGYGVPRDPQKGHAWINRASKSKNSVWKVSQKQPG 344
            +PI+ R PLA+VV DC +RWFQDTLKEAK GD  MQVLVGQMY SGYG+P+D  KG AWIN+AS++++S W+VS K PG
Sbjct:   73 DPIN-RVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPKDENKGRAWINKASRTRSSAWQVSDKPPG 150
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig1629 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TJQ9_SOYBN2.997e-4770.45Putative uncharacterized protein OS=Glycine max PE... [more]
B9HYJ0_POPTR4.645e-3256.80Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9S496_RICCO1.952e-3074.39Putative uncharacterized protein OS=Ricinus commun... [more]
B9HHW8_POPTR5.679e-3071.26Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q84W16_ARATH4.807e-2968.54Putative uncharacterized protein At5g05360 (Fragme... [more]
C6T5J9_SOYBN6.278e-2966.29Putative uncharacterized protein OS=Glycine max PE... [more]
C6T4R5_SOYBN8.200e-2961.62Putative uncharacterized protein OS=Glycine max PE... [more]
B9NFJ6_POPTR1.071e-2871.95Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7LLK4_ARALY1.827e-2851.67Putative uncharacterized protein OS=Arabidopsis ly... [more]
O80906_ARATH1.546e-2770.00At2g38450 OS=Arabidopsis thaliana GN=At2g38450 PE=... [more]
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BLAST of Pisum_sativum_v1_Contig1629 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G05360.13.397e-3168.54| Symbols: | unknown protein; INVOLVED IN: biolog... [more]
AT2G38450.18.366e-3051.26| Symbols: | CONTAINS InterPro DOMAIN/s: Sel1-lik... [more]
AT5G05360.28.658e-2767.09| Symbols: | unknown protein; INVOLVED IN: biolog... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 27..38
score
NoneNo IPR availableSEGsegsegcoord: 7..18
score
IPR006597Sel1-likePFAMPF08238Sel1coord: 71..100
score: 2.4
IPR006597Sel1-likeSMARTSM00671no descriptioncoord: 68..103
score: 6.5
IPR011990Tetratricopeptide-like helicalGENE3D1.25.40.10no descriptioncoord: 61..103
score: 5.7

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig1629 ID=Pisum_sativum_v1_Contig1629; Name=Pisum_sativum_v1_Contig1629; organism=Pisum sativum; type=contig; length=664bp
GACCACACAGACACAAAACAACCCAACCCGTATCGCCGAACCGGGTCACC
ACTCCCCGAACCACAAAACAAGACCTCACTGTTAAGGTGGAATCGCCCAA
GAAGATGGAACCTATCGATTGTCGAACACCACTTGCCAAGGTGGTCGCCG
ATTGCGCCAAGCGGTGGTTCCAAGACACACTCAAGGAGGCCAAAGGTGGA
GATAGCACCATGCAAGTTCTGGTTGGTCAAATGTATTACTCTGGATATGG
TGTTCCTAGAGATCCTCAAAAGGGACATGCTTGGATTAATAGAGCCTCAA
AAAGTAAAAATTCAGTTTGGAAAGTAAGCCAAAAACAGCCGGGTTATAGA
GCAAGTGATTCTGACTCATGTGATTTGGAGAACAAATCTACTCCTTAGTT
TGCAAAAAAGTGTCCTTAACTCTCTTTTGACCTAATCTCAGACGGTACTG
CATTCGTTAGTCATTACTGCCTCGTCGATGAAGAGGAAGTGTTTGAAATC
CCTGTTTGAGTTTGCTGCATTGTGCAGCAAGTATTAGCATGCATGTCCCT
TTATACAAGACAACCATGTCTTCTTTCAATCTTTTAAAATAAACTTTTTG
TATTCTATCATATGTAACTACTGGTGTAGCCATACATATTTATTGTATCA
ATGTATCAAACGCT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf