Pisum_sativum_v1_Contig1639

Contig Overview
NamePisum_sativum_v1_Contig1639
Unique NamePisum_sativum_v1_Contig1639
Typecontig
OrganismPisum sativum (pea)
Sequence length388
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GH720491ESTGH720491:107..277 +Pisum sativum unigene v1n/a
FG529496ESTFG529496:1..388 +Pisum sativum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GH720491GH720491Pisum sativumEST
FG529496FG529496Pisum sativumEST


Homology
[Close]
BLAST of Pisum_sativum_v1_Contig1639 vs. TrEMBL
Match: B9GQS7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_816007 PE=4 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.028e-9
Identity = 30/31 (96.77%), Postives = 31/31 (100.00%), Query Frame = 3 
Query:    3 DVVSNKRINEKYHLIDSKNGRIQVELQWRTS 95
            DVV+NKRINEKYHLIDSKNGRIQVELQWRTS
Sbjct:  508 DVVNNKRINEKYHLIDSKNGRIQVELQWRTS 538
[Close]
BLAST of Pisum_sativum_v1_Contig1639 vs. TrEMBL
Match: A5CAU2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031706 PE=4 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.649e-9
Identity = 29/31 (93.55%), Postives = 31/31 (100.00%), Query Frame = 3 
Query:    3 DVVSNKRINEKYHLIDSKNGRIQVELQWRTS 95
            DVVSNKRINEKYHLIDSKNG+IQ+ELQWRTS
Sbjct:  508 DVVSNKRINEKYHLIDSKNGKIQIELQWRTS 538
[Close]
BLAST of Pisum_sativum_v1_Contig1639 vs. TrEMBL
Match: B9SXV3_RICCO (Calcium lipid binding protein, putative OS=Ricinus communis GN=RCOM_0491050 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.460e-9
Identity = 29/31 (93.55%), Postives = 31/31 (100.00%), Query Frame = 3 
Query:    3 DVVSNKRINEKYHLIDSKNGRIQVELQWRTS 95
            DVVSNKRINEK+HLIDSKNGRIQ+ELQWRTS
Sbjct:  413 DVVSNKRINEKFHLIDSKNGRIQIELQWRTS 443
[Close]
BLAST of Pisum_sativum_v1_Contig1639 vs. TrEMBL
Match: C5X6V5_SORBI (Putative uncharacterized protein Sb02g031220 OS=Sorghum bicolor GN=Sb02g031220 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.518e-9
Identity = 28/31 (90.32%), Postives = 31/31 (100.00%), Query Frame = 3 
Query:    3 DVVSNKRINEKYHLIDSKNGRIQVELQWRTS 95
            DV+SNKRINEKYHLIDSKNG+IQ+ELQWRTS
Sbjct:  509 DVISNKRINEKYHLIDSKNGQIQIELQWRTS 539
[Close]
BLAST of Pisum_sativum_v1_Contig1639 vs. TrEMBL
Match: C5WQN9_SORBI (Plant synaptotagmin OS=Sorghum bicolor GN=NTMC2T1.1 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.518e-9
Identity = 28/31 (90.32%), Postives = 31/31 (100.00%), Query Frame = 3 
Query:    3 DVVSNKRINEKYHLIDSKNGRIQVELQWRTS 95
            DV+SNKRINEKYHLIDSKNG+IQ+ELQWRTS
Sbjct:  509 DVISNKRINEKYHLIDSKNGQIQIELQWRTS 539
[Close]
BLAST of Pisum_sativum_v1_Contig1639 vs. TrEMBL
Match: C0HGK9_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.518e-9
Identity = 28/31 (90.32%), Postives = 31/31 (100.00%), Query Frame = 3 
Query:    3 DVVSNKRINEKYHLIDSKNGRIQVELQWRTS 95
            DV+SNKRINEKYHLIDSKNG+IQ+ELQWRTS
Sbjct:  273 DVISNKRINEKYHLIDSKNGQIQIELQWRTS 303
[Close]
BLAST of Pisum_sativum_v1_Contig1639 vs. TrEMBL
Match: B6TBV7_MAIZE (Calcium lipid binding protein-like OS=Zea mays PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.518e-9
Identity = 28/31 (90.32%), Postives = 31/31 (100.00%), Query Frame = 3 
Query:    3 DVVSNKRINEKYHLIDSKNGRIQVELQWRTS 95
            DV+SNKRINEKYHLIDSKNG+IQ+ELQWRTS
Sbjct:  509 DVISNKRINEKYHLIDSKNGQIQIELQWRTS 539
[Close]
BLAST of Pisum_sativum_v1_Contig1639 vs. TrEMBL
Match: Q6ETC4_ORYSJ (Os02g0448400 protein OS=Oryza sativa subsp. japonica GN=OJ1538_H05.7 PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.901e-9
Identity = 28/31 (90.32%), Postives = 31/31 (100.00%), Query Frame = 3 
Query:    3 DVVSNKRINEKYHLIDSKNGRIQVELQWRTS 95
            DV++NKRINEKYHLIDSKNGRIQ+ELQWRTS
Sbjct:  508 DVINNKRINEKYHLIDSKNGRIQLELQWRTS 538
[Close]
BLAST of Pisum_sativum_v1_Contig1639 vs. TrEMBL
Match: D7KI94_ARALY (Plant synaptotagmin OS=Arabidopsis lyrata subsp. lyrata GN=NTMC2T1.2 PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.901e-9
Identity = 28/31 (90.32%), Postives = 31/31 (100.00%), Query Frame = 3 
Query:    3 DVVSNKRINEKYHLIDSKNGRIQVELQWRTS 95
            DVVSN+RIN+KYHLIDSKNGRIQ+ELQWRTS
Sbjct:  506 DVVSNRRINDKYHLIDSKNGRIQIELQWRTS 536
[Close]
BLAST of Pisum_sativum_v1_Contig1639 vs. TrEMBL
Match: B9F5H7_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_06577 PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.901e-9
Identity = 28/31 (90.32%), Postives = 31/31 (100.00%), Query Frame = 3 
Query:    3 DVVSNKRINEKYHLIDSKNGRIQVELQWRTS 95
            DV++NKRINEKYHLIDSKNGRIQ+ELQWRTS
Sbjct:  534 DVINNKRINEKYHLIDSKNGRIQLELQWRTS 564
[Close]
BLAST of Pisum_sativum_v1_Contig1639 vs. TAIR peptide
Match: AT1G20080.1 (| Symbols: SYTB, ATSYTB, NTMC2TYPE1.2, NTMC2T1.2, SYT2 | Calcium-dependent lipid-binding (CaLB domain) family protein | chr1:6962236-6964912 FORWARD LENGTH=537)

HSP 1 Score: 62.003 bits (149), Expect = 1.093e-10
Identity = 27/31 (87.10%), Postives = 30/31 (96.77%), Query Frame = 3 
Query:    3 DVVSNKRINEKYHLIDSKNGRIQVELQWRTS 95
            DVVSN+RIN+KYHLIDSKNGRIQ+ELQWR S
Sbjct:  506 DVVSNRRINDKYHLIDSKNGRIQIELQWRNS 536
[Close]
BLAST of Pisum_sativum_v1_Contig1639 vs. TAIR peptide
Match: AT2G20990.3 (| Symbols: SYTA | synaptotagmin A | chr2:9014827-9017829 FORWARD LENGTH=579)

HSP 1 Score: 57.7658 bits (138), Expect = 2.062e-9
Identity = 23/31 (74.19%), Postives = 31/31 (100.00%), Query Frame = 3 
Query:    3 DVVSNKRINEKYHLIDSKNGRIQVELQWRTS 95
            DVV+NKR+N+K+HLIDSKNG+IQ+EL+WRT+
Sbjct:  548 DVVNNKRMNQKFHLIDSKNGKIQIELEWRTA 578
[Close]
BLAST of Pisum_sativum_v1_Contig1639 vs. TAIR peptide
Match: AT2G20990.2 (| Symbols: SYTA | synaptotagmin A | chr2:9014827-9017829 FORWARD LENGTH=565)

HSP 1 Score: 57.7658 bits (138), Expect = 2.062e-9
Identity = 23/31 (74.19%), Postives = 31/31 (100.00%), Query Frame = 3 
Query:    3 DVVSNKRINEKYHLIDSKNGRIQVELQWRTS 95
            DVV+NKR+N+K+HLIDSKNG+IQ+EL+WRT+
Sbjct:  534 DVVNNKRMNQKFHLIDSKNGKIQIELEWRTA 564
[Close]
BLAST of Pisum_sativum_v1_Contig1639 vs. TAIR peptide
Match: AT2G20990.1 (| Symbols: SYTA, NTMC2TYPE1.1, ATSYTA, NTMC2T1.1, SYT1 | synaptotagmin A | chr2:9014827-9017829 FORWARD LENGTH=541)

HSP 1 Score: 57.7658 bits (138), Expect = 2.062e-9
Identity = 23/31 (74.19%), Postives = 31/31 (100.00%), Query Frame = 3 
Query:    3 DVVSNKRINEKYHLIDSKNGRIQVELQWRTS 95
            DVV+NKR+N+K+HLIDSKNG+IQ+EL+WRT+
Sbjct:  510 DVVNNKRMNQKFHLIDSKNGKIQIELEWRTA 540
[Close]
BLAST of Pisum_sativum_v1_Contig1639 vs. TAIR peptide
Match: AT2G21010.1 (| Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr2:9020944-9021870 FORWARD LENGTH=256)

HSP 1 Score: 55.4546 bits (132), Expect = 1.023e-8
Identity = 22/31 (70.97%), Postives = 30/31 (96.77%), Query Frame = 3 
Query:    3 DVVSNKRINEKYHLIDSKNGRIQVELQWRTS 95
            DVV+NKR+N+K+HLIDSKNG+IQ+EL W+T+
Sbjct:  225 DVVNNKRMNQKFHLIDSKNGKIQIELDWQTA 255
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig1639 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9GQS7_POPTR2.028e-996.77Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5CAU2_VITVI2.649e-993.55Putative uncharacterized protein OS=Vitis vinifera... [more]
B9SXV3_RICCO3.460e-993.55Calcium lipid binding protein, putative OS=Ricinus... [more]
C5X6V5_SORBI4.518e-990.32Putative uncharacterized protein Sb02g031220 OS=So... [more]
C5WQN9_SORBI4.518e-990.32Plant synaptotagmin OS=Sorghum bicolor GN=NTMC2T1.... [more]
C0HGK9_MAIZE4.518e-990.32Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
B6TBV7_MAIZE4.518e-990.32Calcium lipid binding protein-like OS=Zea mays PE=... [more]
Q6ETC4_ORYSJ5.901e-990.32Os02g0448400 protein OS=Oryza sativa subsp. japoni... [more]
D7KI94_ARALY5.901e-990.32Plant synaptotagmin OS=Arabidopsis lyrata subsp. l... [more]
B9F5H7_ORYSJ5.901e-990.32Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of Pisum_sativum_v1_Contig1639 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G20080.11.093e-1087.10| Symbols: SYTB, ATSYTB, NTMC2TYPE1.2, NTMC2T1.2, ... [more]
AT2G20990.32.062e-974.19| Symbols: SYTA | synaptotagmin A | chr2:9014827-9... [more]
AT2G20990.22.062e-974.19| Symbols: SYTA | synaptotagmin A | chr2:9014827-9... [more]
AT2G20990.12.062e-974.19| Symbols: SYTA, NTMC2TYPE1.1, ATSYTA, NTMC2T1.1, ... [more]
AT2G21010.11.023e-870.97| Symbols: | Calcium-dependent lipid-binding (CaL... [more]
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Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig1639 ID=Pisum_sativum_v1_Contig1639; Name=Pisum_sativum_v1_Contig1639; organism=Pisum sativum; type=contig; length=388bp
GGGACGTCGTTTCTAACAAGAGAATCAATGAGAAATACCATCTTATAGAT
TCCAAGAATGGTCGCATCCAGGTAGAGTTGCAGTGGAGAACTTCATAAGC
ACGACTCGACAAAATTCTCCATAGATATGTACTTCTAATTCCACCCCACC
CCCAAAACCATATGTTAAAATTTAGTCTTCCATGCAGTGTAAGGAAACAG
TGAGAAGAACCTTTCTTGTATTCTTGTGAGTTAGACTGATTTTATTTGTC
GATCATGTACATACCTATGATAAAAAAAAGGTTTGTTTGAAATAGCAGAA
GCACACACATTAGGTGATTTGGATATAAACCATCTATATGACATGATCAA
AGACAGCCTATAAGTATAAGGGTTCTGGTCCTGTGGAT
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