Pisum_sativum_v1_Contig1974

Contig Overview
NamePisum_sativum_v1_Contig1974
Unique NamePisum_sativum_v1_Contig1974
Typecontig
OrganismPisum sativum (pea)
Sequence length926
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
FG536061ESTFG536061:1..335 +
GH720598ESTGH720598:278..807 -
EX569543ESTEX569543:260..876 +
EX569545ESTEX569545:358..876 +
EX569544ESTEX569544:358..876 +
FG528737ESTFG528737:453..926 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
FG536061FG536061Pisum sativumEST
GH720598GH720598Pisum sativumEST
EX569543EX569543Pisum sativumEST
EX569545EX569545Pisum sativumEST
EX569544EX569544Pisum sativumEST
FG528737FG528737Pisum sativumEST


Homology
[Close]
BLAST of Pisum_sativum_v1_Contig1974 vs. SwissProt
Match: SERIC_DICDI (Probable serine incorporator OS=Dictyostelium discoideum GN=serinc PE=3 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 6.877e-7
Identity = 27/70 (38.57%), Postives = 36/70 (51.43%), Query Frame = 3 
Query:  126 YGYGFFHFVFAVGAMYFAMLLVGW-----------NSHHSMKKWSLDVG*TSAWVRIVNEWLAVCVYCTT 302
            Y Y FFHF FA GAMY + LL  W           ++  S    S+D G  S WV++V+ W+ V +Y  T
Sbjct:  335 YNYSFFHFTFACGAMYLSALLTNWATMTSTDITSSSTSSSNSTISVDSGMVSVWVKVVSSWVVVLLYLWT 404
[Close]
BLAST of Pisum_sativum_v1_Contig1974 vs. TrEMBL
Match: C6T7Z4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 4.401e-39
Identity = 77/97 (79.38%), Postives = 87/97 (89.69%), Query Frame = 3 
Query:    3 NIISFVIGILAIVFATFSTGIDSKSFQLKKSEKATEENDVPYGYGFFHFVFAVGAMYFAMLLVGWNSHHSMKKWSLDVG*TSAWVRIVNEWLAVCVY 293
            +IISFV+ ILA+V ATFSTGIDSK FQ +KS+   E+ DVPYGYGFFHFVFA GAMYFAMLL+GWNSHHSM+KW++DVG TSAWVRIVNEWLAVCVY
Sbjct:  289 SIISFVVAILALVVATFSTGIDSKCFQFRKSDPPAED-DVPYGYGFFHFVFATGAMYFAMLLIGWNSHHSMRKWTIDVGWTSAWVRIVNEWLAVCVY 384
[Close]
BLAST of Pisum_sativum_v1_Contig1974 vs. TrEMBL
Match: B9RPB9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0926750 PE=4 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 8.300e-38
Identity = 73/96 (76.04%), Postives = 85/96 (88.54%), Query Frame = 3 
Query:    6 IISFVIGILAIVFATFSTGIDSKSFQLKKSEKATEENDVPYGYGFFHFVFAVGAMYFAMLLVGWNSHHSMKKWSLDVG*TSAWVRIVNEWLAVCVY 293
            IISFV+ +LAIV ATFSTGIDS+ FQ +K EK  E+ DVPYGYGFFHFVFA GAMYFAMLL+GWN+HH++KKW++DVG TS WVR+VNEWLAVCVY
Sbjct:  285 IISFVVALLAIVIATFSTGIDSQCFQFRKGEKEAED-DVPYGYGFFHFVFATGAMYFAMLLIGWNTHHAIKKWTIDVGWTSTWVRVVNEWLAVCVY 379
[Close]
BLAST of Pisum_sativum_v1_Contig1974 vs. TrEMBL
Match: Q8VZI4_ARATH (AT3g24470/MXP5_4 OS=Arabidopsis thaliana GN=At3g24460 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.849e-37
Identity = 74/99 (74.75%), Postives = 84/99 (84.85%), Query Frame = 3 
Query:    6 IISFVIGILAIVFATFSTGIDSKSFQLKKSEKATEE---NDVPYGYGFFHFVFAVGAMYFAMLLVGWNSHHSMKKWSLDVG*TSAWVRIVNEWLAVCVY 293
            IISFV+ +LA+V ATFSTGIDS+ FQ KK E   EE   +DVPYGYGFFHFVFA GAMYFAMLL+GWN+HH MKKW++DVG TS WVR+VNEWLAVCVY
Sbjct:  291 IISFVVALLAMVIATFSTGIDSQCFQFKKDENDQEEEAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNTHHPMKKWTIDVGWTSTWVRVVNEWLAVCVY 389
[Close]
BLAST of Pisum_sativum_v1_Contig1974 vs. TrEMBL
Match: D7L533_ARALY (TMS membrane family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479955 PE=4 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 7.026e-37
Identity = 73/99 (73.74%), Postives = 83/99 (83.84%), Query Frame = 3 
Query:    6 IISFVIGILAIVFATFSTGIDSKSFQLKKSEKATEEND---VPYGYGFFHFVFAVGAMYFAMLLVGWNSHHSMKKWSLDVG*TSAWVRIVNEWLAVCVY 293
            IISFV+ +LA+V ATFSTGIDS+ FQ KK E   EE +   VPYGYGFFHFVFA GAMYFAMLL+GWN+HH MKKW++DVG TS WVR+VNEWLAVCVY
Sbjct:  291 IISFVVALLAMVIATFSTGIDSQCFQFKKDENDQEEEEEDGVPYGYGFFHFVFATGAMYFAMLLIGWNTHHPMKKWTIDVGWTSTWVRVVNEWLAVCVY 389
[Close]
BLAST of Pisum_sativum_v1_Contig1974 vs. TrEMBL
Match: Q9LHF3_ARATH (Genomic DNA, chromosome 3, P1 clone: MXP5 OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.199e-36
Identity = 74/101 (73.27%), Postives = 85/101 (84.16%), Query Frame = 3 
Query:    3 NII-SFVIGILAIVFATFSTGIDSKSFQLKKSEKATEE---NDVPYGYGFFHFVFAVGAMYFAMLLVGWNSHHSMKKWSLDVG*TSAWVRIVNEWLAVCVY 293
            NI+ SFV+ +LA+V ATFSTGIDS+ FQ KK E   EE   +DVPYGYGFFHFVFA GAMYFAMLL+GWN+HH MKKW++DVG TS WVR+VNEWLAVCVY
Sbjct:  410 NIVQSFVVALLAMVIATFSTGIDSQCFQFKKDENDQEEEAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNTHHPMKKWTIDVGWTSTWVRVVNEWLAVCVY 510
[Close]
BLAST of Pisum_sativum_v1_Contig1974 vs. TrEMBL
Match: B9ILJ4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1106490 PE=4 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.199e-36
Identity = 71/96 (73.96%), Postives = 85/96 (88.54%), Query Frame = 3 
Query:    6 IISFVIGILAIVFATFSTGIDSKSFQLKKSEKATEENDVPYGYGFFHFVFAVGAMYFAMLLVGWNSHHSMKKWSLDVG*TSAWVRIVNEWLAVCVY 293
            IISF++ +LAIV ATFSTGIDS+ FQ +K +   +E+DVPYGYGFFHFVFA GAMYFAMLL+GWN+HH ++KW++DVG TSAWVRIVNEWLAVCVY
Sbjct:  285 IISFIVALLAIVIATFSTGIDSQCFQFRKGD-TQDEDDVPYGYGFFHFVFATGAMYFAMLLIGWNTHHIIQKWTIDVGWTSAWVRIVNEWLAVCVY 379
[Close]
BLAST of Pisum_sativum_v1_Contig1974 vs. TrEMBL
Match: D7TBR4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015418001 PE=4 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 4.554e-36
Identity = 69/96 (71.88%), Postives = 83/96 (86.46%), Query Frame = 3 
Query:    6 IISFVIGILAIVFATFSTGIDSKSFQLKKSEKATEENDVPYGYGFFHFVFAVGAMYFAMLLVGWNSHHSMKKWSLDVG*TSAWVRIVNEWLAVCVY 293
            IISF++ +LA+V ATFSTGIDSK FQ +K +   E+ DVPYGYGFFHFVFA GAMYF+MLL+GWN+HHS++KW++DVG TS WVRIVNEWLA CVY
Sbjct:  284 IISFIVALLAMVIATFSTGIDSKCFQFRKDDTQAED-DVPYGYGFFHFVFATGAMYFSMLLIGWNTHHSIRKWTIDVGWTSTWVRIVNEWLAACVY 378
[Close]
BLAST of Pisum_sativum_v1_Contig1974 vs. TrEMBL
Match: A5BSH2_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_041932 PE=4 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.731e-35
Identity = 68/96 (70.83%), Postives = 82/96 (85.42%), Query Frame = 3 
Query:    6 IISFVIGILAIVFATFSTGIDSKSFQLKKSEKATEENDVPYGYGFFHFVFAVGAMYFAMLLVGWNSHHSMKKWSLDVG*TSAWVRIVNEWLAVCVY 293
            IISF++ + A+V ATFSTGIDSK FQ +K +   E+ DVPYGYGFFHFVFA GAMYF+MLL+GWN+HHS++KW++DVG TS WVRIVNEWLA CVY
Sbjct:  284 IISFIVALXAMVIATFSTGIDSKCFQFRKDDTQAED-DVPYGYGFFHFVFATGAMYFSMLLIGWNTHHSIRKWTIDVGWTSTWVRIVNEWLAACVY 378
[Close]
BLAST of Pisum_sativum_v1_Contig1974 vs. TrEMBL
Match: Q93YS8_ARATH (Putative uncharacterized protein At4g13345 OS=Arabidopsis thaliana GN=At4g13345 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.260e-35
Identity = 72/96 (75.00%), Postives = 82/96 (85.42%), Query Frame = 3 
Query:    6 IISFVIGILAIVFATFSTGIDSKSFQLKKSEKATEENDVPYGYGFFHFVFAVGAMYFAMLLVGWNSHHSMKKWSLDVG*TSAWVRIVNEWLAVCVY 293
            IISFV+ +LA+V ATFSTG+DS+ FQ +K E   EE+ +PYGYGFFHFVFA GAMYFAMLLVGWN HHSMKKW++DVG TS WVRIVNEWLAV VY
Sbjct:  284 IISFVVALLAMVIATFSTGVDSQCFQFRKDENH-EEDAIPYGYGFFHFVFATGAMYFAMLLVGWNIHHSMKKWTIDVGWTSTWVRIVNEWLAVGVY 378
[Close]
BLAST of Pisum_sativum_v1_Contig1974 vs. TrEMBL
Match: Q3EA43_ARATH (Putative uncharacterized protein At4g13345.2 OS=Arabidopsis thaliana GN=At4g13345 PE=4 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.260e-35
Identity = 72/96 (75.00%), Postives = 82/96 (85.42%), Query Frame = 3 
Query:    6 IISFVIGILAIVFATFSTGIDSKSFQLKKSEKATEENDVPYGYGFFHFVFAVGAMYFAMLLVGWNSHHSMKKWSLDVG*TSAWVRIVNEWLAVCVY 293
            IISFV+ +LA+V ATFSTG+DS+ FQ +K E   EE+ +PYGYGFFHFVFA GAMYFAMLLVGWN HHSMKKW++DVG TS WVRIVNEWLAV VY
Sbjct:  284 IISFVVALLAMVIATFSTGVDSQCFQFRKDENH-EEDAIPYGYGFFHFVFATGAMYFAMLLVGWNIHHSMKKWTIDVGWTSTWVRIVNEWLAVGVY 378
[Close]
BLAST of Pisum_sativum_v1_Contig1974 vs. TAIR peptide
Match: AT3G24460.1 (| Symbols: | Serinc-domain containing serine and sphingolipid biosynthesis protein | chr3:8886160-8889717 REVERSE LENGTH=409)

HSP 1 Score: 160.614 bits (405), Expect = 1.131e-39
Identity = 74/99 (74.75%), Postives = 84/99 (84.85%), Query Frame = 3 
Query:    6 IISFVIGILAIVFATFSTGIDSKSFQLKKSEKATEE---NDVPYGYGFFHFVFAVGAMYFAMLLVGWNSHHSMKKWSLDVG*TSAWVRIVNEWLAVCVY 293
            IISFV+ +LA+V ATFSTGIDS+ FQ KK E   EE   +DVPYGYGFFHFVFA GAMYFAMLL+GWN+HH MKKW++DVG TS WVR+VNEWLAVCVY
Sbjct:  291 IISFVVALLAMVIATFSTGIDSQCFQFKKDENDQEEEAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNTHHPMKKWTIDVGWTSTWVRVVNEWLAVCVY 389
[Close]
BLAST of Pisum_sativum_v1_Contig1974 vs. TAIR peptide
Match: AT4G13345.2 (| Symbols: MEE55 | Serinc-domain containing serine and sphingolipid biosynthesis protein | chr4:7767292-7769426 FORWARD LENGTH=394)

HSP 1 Score: 153.68 bits (387), Expect = 1.382e-37
Identity = 72/96 (75.00%), Postives = 82/96 (85.42%), Query Frame = 3 
Query:    6 IISFVIGILAIVFATFSTGIDSKSFQLKKSEKATEENDVPYGYGFFHFVFAVGAMYFAMLLVGWNSHHSMKKWSLDVG*TSAWVRIVNEWLAVCVY 293
            IISFV+ +LA+V ATFSTG+DS+ FQ +K E   EE+ +PYGYGFFHFVFA GAMYFAMLLVGWN HHSMKKW++DVG TS WVRIVNEWLAV VY
Sbjct:  284 IISFVVALLAMVIATFSTGVDSQCFQFRKDENH-EEDAIPYGYGFFHFVFATGAMYFAMLLVGWNIHHSMKKWTIDVGWTSTWVRIVNEWLAVGVY 378
[Close]
BLAST of Pisum_sativum_v1_Contig1974 vs. TAIR peptide
Match: AT4G13345.1 (| Symbols: MEE55 | Serinc-domain containing serine and sphingolipid biosynthesis protein | chr4:7767292-7769426 FORWARD LENGTH=394)

HSP 1 Score: 153.68 bits (387), Expect = 1.382e-37
Identity = 72/96 (75.00%), Postives = 82/96 (85.42%), Query Frame = 3 
Query:    6 IISFVIGILAIVFATFSTGIDSKSFQLKKSEKATEENDVPYGYGFFHFVFAVGAMYFAMLLVGWNSHHSMKKWSLDVG*TSAWVRIVNEWLAVCVY 293
            IISFV+ +LA+V ATFSTG+DS+ FQ +K E   EE+ +PYGYGFFHFVFA GAMYFAMLLVGWN HHSMKKW++DVG TS WVRIVNEWLAV VY
Sbjct:  284 IISFVVALLAMVIATFSTGVDSQCFQFRKDENH-EEDAIPYGYGFFHFVFATGAMYFAMLLVGWNIHHSMKKWTIDVGWTSTWVRIVNEWLAVGVY 378
[Close]
BLAST of Pisum_sativum_v1_Contig1974 vs. TAIR peptide
Match: AT2G33205.1 (| Symbols: | Serinc-domain containing serine and sphingolipid biosynthesis protein | chr2:14070987-14073211 REVERSE LENGTH=422)

HSP 1 Score: 137.502 bits (345), Expect = 1.025e-32
Identity = 63/96 (65.62%), Postives = 77/96 (80.21%), Query Frame = 3 
Query:    6 IISFVIGILAIVFATFSTGIDSKSFQLKKSEKATEENDVPYGYGFFHFVFAVGAMYFAMLLVGWNSHHSMKKWSLDVG*TSAWVRIVNEWLAVCVY 293
            I+SF+I I AIV ATFSTGIDS+SF+ +K E A EE+D+PY YGFFH VF++GAMYFAML + WN  HS +KWS+DVG TS WV+IVNEW A  +Y
Sbjct:  301 ILSFLIAIGAIVMATFSTGIDSESFRFRKDE-AKEEDDIPYSYGFFHLVFSLGAMYFAMLFISWNLSHSTEKWSIDVGWTSTWVKIVNEWFAAAIY 395
[Close]
BLAST of Pisum_sativum_v1_Contig1974 vs. TAIR peptide
Match: AT1G16180.2 (| Symbols: | Serinc-domain containing serine and sphingolipid biosynthesis protein | chr1:5540905-5542670 FORWARD LENGTH=412)

HSP 1 Score: 61.6178 bits (148), Expect = 7.148e-10
Identity = 29/65 (44.62%), Postives = 38/65 (58.46%), Query Frame = 3 
Query:   87 KKSEKATEENDVP--YGYGFFHFVFAVGAMYFAMLLVGWNSHHSMKKWSLDVG*TSAWVRIVNEW 275
            K  EK  +EN  P  Y Y FFH +F++ +MY AMLL GW++        +DVG  S WVR+V  W
Sbjct:  327 KAEEKEEKENKKPVSYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRVVTSW 391
[Close]
BLAST of Pisum_sativum_v1_Contig1974 vs. TAIR peptide
Match: AT1G16180.1 (| Symbols: | Serinc-domain containing serine and sphingolipid biosynthesis protein | chr1:5540905-5542670 FORWARD LENGTH=412)

HSP 1 Score: 61.6178 bits (148), Expect = 7.148e-10
Identity = 29/65 (44.62%), Postives = 38/65 (58.46%), Query Frame = 3 
Query:   87 KKSEKATEENDVP--YGYGFFHFVFAVGAMYFAMLLVGWNSHHSMKKWSLDVG*TSAWVRIVNEW 275
            K  EK  +EN  P  Y Y FFH +F++ +MY AMLL GW++        +DVG  S WVR+V  W
Sbjct:  327 KAEEKEEKENKKPVSYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRVVTSW 391
[Close]
BLAST of Pisum_sativum_v1_Contig1974 vs. TAIR peptide
Match: AT3G06170.1 (| Symbols: | Serinc-domain containing serine and sphingolipid biosynthesis protein | chr3:1867520-1869738 FORWARD LENGTH=409)

HSP 1 Score: 60.8474 bits (146), Expect = 1.219e-9
Identity = 33/72 (45.83%), Postives = 42/72 (58.33%), Query Frame = 3 
Query:   87 KKSEKATEENDVPYGYGFFHFVFAVGAMYFAMLLVGWNSHHSMKKWSLDVG*TSAWVRIVNEWLAVCVYCTT 302
            KKS +A E   V Y Y FFH +FA+ +MY AMLL GW +  S     +DVG TS WV+I   W+   +Y  T
Sbjct:  327 KKSGEA-EARPVSYSYSFFHIIFALASMYAAMLLSGW-TDSSESATLIDVGWTSVWVKICTGWVTAGLYIWT 396
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig1974 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
SERIC_DICDI6.877e-738.57Probable serine incorporator OS=Dictyostelium disc... [more]
back to top
BLAST of Pisum_sativum_v1_Contig1974 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6T7Z4_SOYBN4.401e-3979.38Putative uncharacterized protein OS=Glycine max PE... [more]
B9RPB9_RICCO8.300e-3876.04Putative uncharacterized protein OS=Ricinus commun... [more]
Q8VZI4_ARATH1.849e-3774.75AT3g24470/MXP5_4 OS=Arabidopsis thaliana GN=At3g24... [more]
D7L533_ARALY7.026e-3773.74TMS membrane family protein OS=Arabidopsis lyrata ... [more]
Q9LHF3_ARATH1.199e-3673.27Genomic DNA, chromosome 3, P1 clone: MXP5 OS=Arabi... [more]
B9ILJ4_POPTR1.199e-3673.96Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TBR4_VITVI4.554e-3671.88Whole genome shotgun sequence of line PN40024, sca... [more]
A5BSH2_VITVI1.731e-3570.83Putative uncharacterized protein (Fragment) OS=Vit... [more]
Q93YS8_ARATH2.260e-3575.00Putative uncharacterized protein At4g13345 OS=Arab... [more]
Q3EA43_ARATH2.260e-3575.00Putative uncharacterized protein At4g13345.2 OS=Ar... [more]
back to top
BLAST of Pisum_sativum_v1_Contig1974 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 7
Match NameE-valueIdentityDescription
AT3G24460.11.131e-3974.75| Symbols: | Serinc-domain containing serine and ... [more]
AT4G13345.21.382e-3775.00| Symbols: MEE55 | Serinc-domain containing serine... [more]
AT4G13345.11.382e-3775.00| Symbols: MEE55 | Serinc-domain containing serine... [more]
AT2G33205.11.025e-3265.63| Symbols: | Serinc-domain containing serine and ... [more]
AT1G16180.27.148e-1044.62| Symbols: | Serinc-domain containing serine and ... [more]
AT1G16180.17.148e-1044.62| Symbols: | Serinc-domain containing serine and ... [more]
AT3G06170.11.219e-945.83| Symbols: | Serinc-domain containing serine and ... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005016TMS membrane protein/tumour differentially expressed proteinPANTHERPTHR10383TUMOR DIFFERENTIALLY EXPRESSED PROTEIN-RELATEDcoord: 2..79
score: 1.6
IPR005016TMS membrane protein/tumour differentially expressed proteinPFAMPF03348Serinccoord: 24..70
score: 2.7
NoneNo IPR availablePANTHERPTHR10383:SF2UNCHARACTERIZEDcoord: 2..79
score: 1.6

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig1974 ID=Pisum_sativum_v1_Contig1974; Name=Pisum_sativum_v1_Contig1974; organism=Pisum sativum; type=contig; length=926bp
AAAACATCATTAGTTTTGTTATTGGAATACTAGCAATAGTTTTTGCAACA
TTTTCAACAGGCATAGATTCTAAATCCTTTCAGTTAAAGAAGAGTGAGAA
GGCAACAGAAGAAAATGATGTTCCATATGGTTATGGCTTCTTTCATTTTG
TTTTTGCCGTAGGAGCTATGTACTTTGCAATGCTATTGGTTGGATGGAAT
AGTCATCACTCTATGAAAAAATGGTCACTTGATGTGGGCTGAACCAGTGC
TTGGGTCAGAATAGTAAATGAATGGTTGGCAGTCTGTGTATACTGTACCA
CACCTTTGGTTTGTCATGTTATGCTCATGAGTATGATGAAACAGAAAGGA
AATGCAACATCTTAAAAGCATGGTAGGAAGTTTACCTTTGATTTGAGCTG
CTGGCCATGCTTAACAGTCCGGTCTTCAACCGAGCTGAGTGAATGAGACT
CATTGGCATGGGGGGCCTTCTGAAACATTGGAAATGGGCAGAGGCTGAAA
ACTTTGGGTGTCAGGCTGTGTTTGAAGTGGGGAGTTATGCCTCAAGTATA
AATTCTGGTGTCAGGCTGTGTTTGAAGTGGGGAGTCATGCCTCAAATATA
AATTCTGGTGTCCCTAGTGAAAGTTGAAGCAAAACATTGAAAATTTGAGT
TGTTCTTCATAATGCCTATTAAGCTCACCAGATCTTGCGAAAGAAATGGG
AGAAGGTGTGTAGAGAAAATAAAAGGCGGGGAGGGGACTGGGTATATAAA
ATTTGAGAGCTTTCAACTTAGCTTTGGTTTGGTACTGGCTCTTGAGGTTG
CATGTAGAAAAACAAAGTCAGTTTTTGAAAACCAGAATTTCATGTATATG
GACCCAACATATTATTCAAAAAAAGTTTATTTGACAGTAATATATAAGAC
AACTATTGCCCTTTTGTANNANANAN
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR005016TDE1/TMS