Pisum_sativum_v1_Contig2020

Contig Overview


Name	Pisum_sativum_v1_Contig2020
Unique Name	Pisum_sativum_v1_Contig2020
Type	contig
Organism	Pisum sativum (pea)
Sequence length	596

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
FG536967	EST	FG536967:2..476 +	Pisum sativum unigene v1	n/a
FG528822	EST	FG528822:1..596 +	Pisum sativum unigene v1	n/a
FG536596	EST	FG536596:2..596 +	Pisum sativum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
KEGG analysis for Pisum sativum unigene v1	2011-01-05
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
FG536967	FG536967	Pisum sativum	EST
FG528822	FG528822	Pisum sativum	EST
FG536596	FG536596	Pisum sativum	EST

Homology

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. SwissProt
Match: H2A1_PEA (Histone H2A.1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.526e-41
Identity = 86/109 (78.90%), Postives = 90/109 (82.57%), Query Frame = 1

Query:   58 SVTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNEN 384
            SVT+SVRAGLQFPVGR+GRFLKKGRYAQRVGTGAP+                 GNAARDNKKNRISPRHLLLAVRND ELGKLLAGVTIA+GGVLPNINPVLLPKR EN
Sbjct:   23 SVTRSVRAGLQFPVGRVGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDEELGKLLAGVTIAYGGVLPNINPVLLPKRKEN 131

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. SwissProt
Match: H2A2_PEA (Histone H2A.2 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.994e-41
Identity = 86/109 (78.90%), Postives = 91/109 (83.49%), Query Frame = 1

Query:   58 SVTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNEN 384
            +VT+SVRAGLQFPVGRIGRFLKKGRYAQRVGTGAP+                 GNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIA+GGVLPNINPVLLPKR E+
Sbjct:   23 AVTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAYGGVLPNINPVLLPKRTES 131

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. SwissProt
Match: H2A3_MEDTR (Probable histone H2A.3 OS=Medicago truncatula PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 4.910e-40
Identity = 82/108 (75.93%), Postives = 88/108 (81.48%), Query Frame = 1

Query:   58 SVTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 381
            SVT+S+RAGLQFPVGRIGR+LKKGRYAQRVGTGAP+                 GNAARDNKKNRI PRHLLLAVRND ELGKLLAGVTIAHGGVLPNINP+LLPK+ E
Sbjct:   24 SVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHLLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKTE 131

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. SwissProt
Match: H2A1_MEDTR (Probable histone H2A.1 OS=Medicago truncatula GN=MtrDRAFT_AC149210g1v1 PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 4.910e-40
Identity = 82/108 (75.93%), Postives = 88/108 (81.48%), Query Frame = 1

Query:   58 SVTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 381
            SVT+S RAGLQFPVGRIGR+LKKGRYAQRVGTGAP+                 GNAARDNKKNRI PRH+LLAVRND ELGKLLAGVTIAHGGVLPNINP+LLPK+NE
Sbjct:   22 SVTRSTRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKNE 129

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. SwissProt
Match: H2A2_MEDTR (Probable histone H2A.2 OS=Medicago truncatula GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 8.375e-40
Identity = 82/108 (75.93%), Postives = 88/108 (81.48%), Query Frame = 1

Query:   58 SVTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 381
            SVT+S+RAGLQFPVGRIGR+LKKGRYAQRVGTGAP+                 GNAARDNKKNRI PRH+LLAVRND ELGKLLAGVTIAHGGVLPNINPVLLPK+ E
Sbjct:   23 SVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTE 130

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. SwissProt
Match: H2A_EUPES (Histone H2A OS=Euphorbia esula PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.694e-38
Identity = 80/107 (74.77%), Postives = 87/107 (81.31%), Query Frame = 1

Query:   61 VTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 381
            V++SV+AGLQFPVGRIGRFLKKGRYAQRVG+GAP+                 GNAARDNKKNRI PRH+LLAVRND ELGKLLAGVTIAHGGVLPNINPVLLPK+ E
Sbjct:   24 VSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKAE 130

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. SwissProt
Match: H2A_PETCR (Histone H2A OS=Petroselinum crispum PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.519e-38
Identity = 80/106 (75.47%), Postives = 85/106 (80.19%), Query Frame = 1

Query:   58 SVTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 375
            SVT+SV+AGLQFPVGRIGR+LKKGRYAQRVGTGAP+                 GNAARDNKK RI PRHLLLAVRND ELGKLLAGVT AHGGVLPNINPVLLPK+
Sbjct:   22 SVTRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLLLAVRNDEELGKLLAGVTFAHGGVLPNINPVLLPKK 127

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. SwissProt
Match: H2A6_ORYSJ (Probable histone H2A.6 OS=Oryza sativa subsp. japonica GN=Os05g0113900 PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 6.002e-38
Identity = 78/105 (74.29%), Postives = 86/105 (81.90%), Query Frame = 1

Query:   61 VTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 375
            V++SV+AGLQFPVGRIGR+LKKGRYAQRVGTGAP+                 GNAARDNKKNRI PRH+LLA+RND ELGKLLAGVTIAHGGVLPNINPVLLPK+
Sbjct:   26 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 130

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. SwissProt
Match: H2A6_ORYSI (Probable histone H2A.6 OS=Oryza sativa subsp. indica GN=OsI_017523 PE=3 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 6.002e-38
Identity = 78/105 (74.29%), Postives = 86/105 (81.90%), Query Frame = 1

Query:   61 VTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 375
            V++SV+AGLQFPVGRIGR+LKKGRYAQRVGTGAP+                 GNAARDNKKNRI PRH+LLA+RND ELGKLLAGVTIAHGGVLPNINPVLLPK+
Sbjct:   26 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 130

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. SwissProt
Match: H2A5_ORYSJ (Probable histone H2A.5 OS=Oryza sativa subsp. japonica GN=Os01g0502700 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 6.002e-38
Identity = 77/106 (72.64%), Postives = 87/106 (82.08%), Query Frame = 1

Query:   58 SVTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 375
            +V++SV+AGLQFPVGRIGR+LKKGRYAQR+GTGAP+                 GNAARDNKKNRI PRH+LLA+RND ELGKLLAGVTIAHGGVLPNINPVLLPK+
Sbjct:   28 AVSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 133

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. TrEMBL
Match: B9T4D5_RICCO (Histone H2A OS=Ricinus communis GN=RCOM_0390300 PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.594e-38
Identity = 82/107 (76.64%), Postives = 87/107 (81.31%), Query Frame = 1

Query:   61 VTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 381
            VT+SVRAGLQFPVGRIGR+LKKGRYAQRVGTGAP+                 GNAARDNKKNRI PRH+LLAVRND ELGKLLAGVTIAHGGVLPNINPVLLPK+ E
Sbjct:   24 VTRSVRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTE 130

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. TrEMBL
Match: B9T4D3_RICCO (Histone H2A OS=Ricinus communis GN=RCOM_0390180 PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.594e-38
Identity = 82/107 (76.64%), Postives = 87/107 (81.31%), Query Frame = 1

Query:   61 VTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 381
            VT+SVRAGLQFPVGRIGR+LKKGRYAQRVGTGAP+                 GNAARDNKKNRI PRH+LLAVRND ELGKLLAGVTIAHGGVLPNINPVLLPK+ E
Sbjct:   24 VTRSVRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTE 130

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. TrEMBL
Match: C6SZZ2_SOYBN (Histone H2A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.681e-37
Identity = 80/107 (74.77%), Postives = 87/107 (81.31%), Query Frame = 1

Query:   61 VTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 381
            V++SV+AGLQFPVGRIGR+LKKGRYAQRVGTGAP+                 GNAARDNKKNRI PRH+LLAVRND ELGKLLAGVTIAHGGVLPNINPVLLPK+ E
Sbjct:   24 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTE 130

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. TrEMBL
Match: C6SWA6_SOYBN (Histone H2A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.681e-37
Identity = 80/107 (74.77%), Postives = 87/107 (81.31%), Query Frame = 1

Query:   61 VTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 381
            V++SV+AGLQFPVGRIGR+LKKGRYAQRVGTGAP+                 GNAARDNKKNRI PRH+LLAVRND ELGKLLAGVTIAHGGVLPNINPVLLPK+ E
Sbjct:   24 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTE 130

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. TrEMBL
Match: C6TG01_SOYBN (Histone H2A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.868e-37
Identity = 79/107 (73.83%), Postives = 88/107 (82.24%), Query Frame = 1

Query:   61 VTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 381
            V++SV+AGLQFPVGRIGR+LK+GRYAQRVGTGAP+                 GNAARDNKKNRI PRH+LLAVRND ELGKLLAGVTIAHGGVLPNINPVLLPK++E
Sbjct:   24 VSRSVKAGLQFPVGRIGRYLKRGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKSE 130

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. TrEMBL
Match: Q677E7_HYAOR (Histone H2A OS=Hyacinthus orientalis PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.745e-37
Identity = 79/106 (74.53%), Postives = 87/106 (82.08%), Query Frame = 1

Query:   58 SVTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 375
            SV++SV+AGLQFPVGR+GR+LKKGRYAQRVGTGAP+                 GNAARDNKKNRI PRH+LLAVRND ELGKLLAGVTIAHGGVLPNINPVLLPK+
Sbjct:   23 SVSRSVKAGLQFPVGRLGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 128

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. TrEMBL
Match: Q677E4_HYAOR (Histone H2A OS=Hyacinthus orientalis PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.745e-37
Identity = 79/106 (74.53%), Postives = 87/106 (82.08%), Query Frame = 1

Query:   58 SVTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 375
            SV++SV+AGLQFPVGR+GR+LKKGRYAQRVGTGAP+                 GNAARDNKKNRI PRH+LLAVRND ELGKLLAGVTIAHGGVLPNINPVLLPK+
Sbjct:   23 SVSRSVKAGLQFPVGRLGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 128

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. TrEMBL
Match: C6TMV8_SOYBN (Histone H2A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.745e-37
Identity = 79/107 (73.83%), Postives = 87/107 (81.31%), Query Frame = 1

Query:   61 VTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 381
            V++SV+AGLQFPVGRIGR+LKKGRYAQRVGTGAP+                 GNAARDNKKNRI PRH+LLAVRND ELGKLLAGVTIAHGGVLPNINPVLLPK+ +
Sbjct:   24 VSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTQ 130

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. TrEMBL
Match: B6T3J3_MAIZE (Histone H2A OS=Zea mays PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.388e-37
Identity = 78/106 (73.58%), Postives = 87/106 (82.08%), Query Frame = 1

Query:   58 SVTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 375
            SV++SV+AGLQFPVGRIGR+LKKGRYAQRVGTGAP+                 GNAA+DNKK RI PRHLLLA+RNDVELGKLL+GVTIAHGGVLPNINPVLLPK+
Sbjct:   26 SVSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIVPRHLLLAIRNDVELGKLLSGVTIAHGGVLPNINPVLLPKK 131

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. TrEMBL
Match: B6T101_MAIZE (Histone H2A OS=Zea mays PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.388e-37
Identity = 78/106 (73.58%), Postives = 87/106 (82.08%), Query Frame = 1

Query:   58 SVTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 375
            SV++SV+AGLQFPVGRIGR+LKKGRYAQRVGTGAP+                 GNAA+DNKK RI PRH+LLA+RNDVELGKLLAGVTIAHGGVLPNINPVLLPK+
Sbjct:   26 SVSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIVPRHVLLAIRNDVELGKLLAGVTIAHGGVLPNINPVLLPKK 131

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. TAIR peptide
Match: AT5G02560.1 (| Symbols: HTA12 | histone H2A 12 | chr5:575437-576456 FORWARD LENGTH=153)

HSP 1 Score: 151.369 bits (381), Expect = 3.452e-37
Identity = 74/107 (69.16%), Postives = 86/107 (80.37%), Query Frame = 1

Query:   61 VTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 381
            V++SV++GLQFPVGRIGR+LKKGRY++RVGTGAP+                 GNAARDNKKNRI PRH+LLAVRND ELG LL GVTIAHGGVLPNINP+LLPK++E
Sbjct:   25 VSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSE 131

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. TAIR peptide
Match: AT5G59870.1 (| Symbols: HTA6 | histone H2A 6 | chr5:24115605-24116144 REVERSE LENGTH=150)

HSP 1 Score: 148.288 bits (373), Expect = 2.922e-36
Identity = 75/107 (70.09%), Postives = 85/107 (79.44%), Query Frame = 1

Query:   58 SVTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRN 378
            SV+KS++AGLQFPVGRI RFLKKGRYAQR+G GAP+                 GNAARDNKK+RI PRHLLLA+RND ELGKLL+GVTIAHGGVLPNIN VLLPK++
Sbjct:   24 SVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKKS 130

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. TAIR peptide
Match: AT5G27670.1 (| Symbols: HTA7 | histone H2A 7 | chr5:9792807-9793365 REVERSE LENGTH=150)

HSP 1 Score: 145.206 bits (365), Expect = 2.474e-35
Identity = 73/107 (68.22%), Postives = 83/107 (77.57%), Query Frame = 1

Query:   58 SVTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRN 378
            SV+KSV+AGLQFPVGRI R+LKKGRYA R G+GAP+                 GNAARDNKKNRI+PRHL LA+RND ELG+LL GVTIA GGVLPNINPVLLPK++
Sbjct:   25 SVSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKKS 131

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. TAIR peptide
Match: AT5G02560.2 (| Symbols: HTA12 | histone H2A 12 | chr5:575437-576456 FORWARD LENGTH=177)

HSP 1 Score: 137.887 bits (346), Expect = 3.949e-33
Identity = 74/131 (56.49%), Postives = 86/131 (65.65%), Query Frame = 1

Query:   61 VTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXX------------------------GNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKRNE 381
            V++SV++GLQFPVGRIGR+LKKGRY++RVGTGAP+                                         GNAARDNKKNRI PRH+LLAVRND ELG LL GVTIAHGGVLPNINP+LLPK++E
Sbjct:   25 VSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAENSCGFCSVASLTIYRCRMSSSDFRVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSE 155

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. TAIR peptide
Match: AT1G51060.1 (| Symbols: HTA10 | histone H2A 10 | chr1:18926948-18927443 FORWARD LENGTH=132)

HSP 1 Score: 129.413 bits (324), Expect = 1.405e-30
Identity = 65/106 (61.32%), Postives = 77/106 (72.64%), Query Frame = 1

Query:   58 SVTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 375
            + T+S +AGLQFPVGRI RFLKKG+YA+RVG GAP+                 GNAARDNKK RI PRH+ LAVRND EL KLL  VTIA+GGV+PNI+ +LLPK+
Sbjct:   16 ATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK 121

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. TAIR peptide
Match: AT1G08880.1 (| Symbols: HTA5, H2AXA, G-H2AX, GAMMA-H2AX | Histone superfamily protein | chr1:2847144-2847676 REVERSE LENGTH=142)

HSP 1 Score: 127.872 bits (320), Expect = 4.087e-30
Identity = 65/106 (61.32%), Postives = 75/106 (70.75%), Query Frame = 1

Query:   58 SVTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 375
            SV++S +AGLQFPVGRI RFLK G+YA+RVG GAP+                 GNAARDNKK RI PRH+ LAVRND EL KLL  VTIA+GGVLPNI+  LLP +
Sbjct:   22 SVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSK 127

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. TAIR peptide
Match: AT1G54690.1 (| Symbols: HTA3, H2AXB, G-H2AX, GAMMA-H2AX | gamma histone variant H2AX | chr1:20414607-20415206 REVERSE LENGTH=142)

HSP 1 Score: 127.487 bits (319), Expect = 5.338e-30
Identity = 65/106 (61.32%), Postives = 75/106 (70.75%), Query Frame = 1

Query:   58 SVTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 375
            SV++S +AGLQFPVGRI RFLK G+YA+RVG GAP+                 GNAARDNKK RI PRH+ LAVRND EL KLL  VTIA+GGVLPNI+  LLP +
Sbjct:   22 SVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSK 127

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. TAIR peptide
Match: AT4G27230.2 (| Symbols: HTA2 | histone H2A 2 | chr4:13637515-13638325 REVERSE LENGTH=131)

HSP 1 Score: 126.716 bits (317), Expect = 9.105e-30
Identity = 64/106 (60.38%), Postives = 76/106 (71.70%), Query Frame = 1

Query:   58 SVTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 375
            S ++S +AGLQFPVGRI RFLK G+YA+RVG GAP+                 GNAARDNKK RI PRH+ LAVRND EL KLL  VTIA+GGV+PNI+ +LLPK+
Sbjct:   16 STSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK 121

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. TAIR peptide
Match: AT4G27230.1 (| Symbols: HTA2 | histone H2A 2 | chr4:13637515-13638325 REVERSE LENGTH=131)

HSP 1 Score: 126.716 bits (317), Expect = 9.105e-30
Identity = 64/106 (60.38%), Postives = 76/106 (71.70%), Query Frame = 1

Query:   58 SVTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 375
            S ++S +AGLQFPVGRI RFLK G+YA+RVG GAP+                 GNAARDNKK RI PRH+ LAVRND EL KLL  VTIA+GGV+PNI+ +LLPK+
Sbjct:   16 STSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKK 121

[Close]

BLAST of Pisum_sativum_v1_Contig2020 vs. TAIR peptide
Match: AT3G20670.1 (| Symbols: HTA13 | histone H2A 13 | chr3:7229472-7229963 FORWARD LENGTH=132)

HSP 1 Score: 126.331 bits (316), Expect = 1.189e-29
Identity = 64/106 (60.38%), Postives = 75/106 (70.75%), Query Frame = 1

Query:   58 SVTKSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPIXXXXXXXXXXXXXXXXXGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAHGGVLPNINPVLLPKR 375
            S ++S +AGLQFPVGRI RFLK G+YA RVG GAP+                 GNAARDNKK RI PRH+ LAVRND EL KLL  VTIA+GGV+PNI+ +LLPK+
Sbjct:   16 STSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKK 121

The following BLAST results are available for this feature:

BLAST of Pisum_sativum_v1_Contig2020 vs. SwissProt
BLAST of Pisum_sativum_v1_Contig2020 vs. TrEMBL
BLAST of Pisum_sativum_v1_Contig2020 vs. TAIR peptide

BLAST of Pisum_sativum_v1_Contig2020 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
H2A1_PEA	1.526e-41	78.90	Histone H2A.1 OS=Pisum sativum PE=2 SV=1	[more]
H2A2_PEA	1.994e-41	78.90	Histone H2A.2 OS=Pisum sativum PE=2 SV=1	[more]
H2A3_MEDTR	4.910e-40	75.93	Probable histone H2A.3 OS=Medicago truncatula PE=3...	[more]
H2A1_MEDTR	4.910e-40	75.93	Probable histone H2A.1 OS=Medicago truncatula GN=M...	[more]
H2A2_MEDTR	8.375e-40	75.93	Probable histone H2A.2 OS=Medicago truncatula GN=M...	[more]
H2A_EUPES	2.694e-38	74.77	Histone H2A OS=Euphorbia esula PE=2 SV=1	[more]
H2A_PETCR	3.519e-38	75.47	Histone H2A OS=Petroselinum crispum PE=2 SV=1	[more]
H2A6_ORYSJ	6.002e-38	74.29	Probable histone H2A.6 OS=Oryza sativa subsp. japo...	[more]
H2A6_ORYSI	6.002e-38	74.29	Probable histone H2A.6 OS=Oryza sativa subsp. indi...	[more]
H2A5_ORYSJ	6.002e-38	72.64	Probable histone H2A.5 OS=Oryza sativa subsp. japo...	[more]

BLAST of Pisum_sativum_v1_Contig2020 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9T4D5_RICCO	2.594e-38	76.64	Histone H2A OS=Ricinus communis GN=RCOM_0390300 PE...	[more]
B9T4D3_RICCO	2.594e-38	76.64	Histone H2A OS=Ricinus communis GN=RCOM_0390180 PE...	[more]
C6SZZ2_SOYBN	1.681e-37	74.77	Histone H2A OS=Glycine max PE=2 SV=1	[more]
C6SWA6_SOYBN	1.681e-37	74.77	Histone H2A OS=Glycine max PE=2 SV=1	[more]
C6TG01_SOYBN	2.868e-37	73.83	Histone H2A OS=Glycine max PE=2 SV=1	[more]
Q677E7_HYAOR	3.745e-37	74.53	Histone H2A OS=Hyacinthus orientalis PE=2 SV=1	[more]
Q677E4_HYAOR	3.745e-37	74.53	Histone H2A OS=Hyacinthus orientalis PE=2 SV=1	[more]
C6TMV8_SOYBN	3.745e-37	73.83	Histone H2A OS=Glycine max PE=2 SV=1	[more]
B6T3J3_MAIZE	6.388e-37	73.58	Histone H2A OS=Zea mays PE=2 SV=1	[more]
B6T101_MAIZE	6.388e-37	73.58	Histone H2A OS=Zea mays PE=2 SV=1	[more]

BLAST of Pisum_sativum_v1_Contig2020 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT5G02560.1	3.452e-37	69.16	\| Symbols: HTA12 \| histone H2A 12 \| chr5:575437-57...	[more]
AT5G59870.1	2.922e-36	70.09	\| Symbols: HTA6 \| histone H2A 6 \| chr5:24115605-24...	[more]
AT5G27670.1	2.474e-35	68.22	\| Symbols: HTA7 \| histone H2A 7 \| chr5:9792807-979...	[more]
AT5G02560.2	3.949e-33	56.49	\| Symbols: HTA12 \| histone H2A 12 \| chr5:575437-57...	[more]
AT1G51060.1	1.405e-30	61.32	\| Symbols: HTA10 \| histone H2A 10 \| chr1:18926948-...	[more]
AT1G08880.1	4.087e-30	61.32	\| Symbols: HTA5, H2AXA, G-H2AX, GAMMA-H2AX \| Histo...	[more]
AT1G54690.1	5.338e-30	61.32	\| Symbols: HTA3, H2AXB, G-H2AX, GAMMA-H2AX \| gamma...	[more]
AT4G27230.2	9.105e-30	60.38	\| Symbols: HTA2 \| histone H2A 2 \| chr4:13637515-13...	[more]
AT4G27230.1	9.105e-30	60.38	\| Symbols: HTA2 \| histone H2A 2 \| chr4:13637515-13...	[more]
AT3G20670.1	1.189e-29	60.38	\| Symbols: HTA13 \| histone H2A 13 \| chr3:7229472-7...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002119	Histone H2A	PRINTS	PR00620	HISTONEH2A	coord: 19..41 score: 6e-51coord: 48..63 score: 6e-51coord: 63..76 score: 6e-51coord: 77..91 score: 6e-51coord: 105..123 score: 6
IPR002119	Histone H2A	PANTHER	PTHR23430	HISTONE H2A	coord: 13..146 score: 7.2
IPR002119	Histone H2A	SMART	SM00414	no description	coord: 8..128 score: 1.3
IPR002119	Histone H2A	PROSITE	PS00046	HISTONE_H2A	coord: 27..33 score
IPR007125	Histone core	PFAM	PF00125	Histone	coord: 24..96 score: 6.3
IPR009072	Histone-fold	GENE3D	1.10.20.10	no description	coord: 10..129 score: 2.4
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 7..131 score: 1.5
None	No IPR available	SEG	seg	seg	coord: 3..19 score: NAcoord: 56..72 score: NAcoord: 129..146 score
None	No IPR available	SEG	seg	seg	coord: 40..53 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Pisum_sativum_v1_Contig2020 ID=Pisum_sativum_v1_Contig2020; Name=Pisum_sativum_v1_Contig2020; organism=Pisum sativum; type=contig; length=596bp
AACACAAAGGTGAAGAAGGGAGCAGGTGGAAGGAAAGGAGGAGGACCAAG
GAAGAAATCCGTGACTAAATCCGTCAGAGCTGGACTTCAATTCCCAGTTG
GAAGAATCGGTCGGTTTTTGAAGAAAGGTAGATATGCTCAGCGTGTTGGT
ACCGGTGCTCCTATTTACCTAGCTGCCGTTCTCGAATATCTTGCTGCTGA
GGTTCTTGAGTTGGCTGGAAATGCAGCACGTGACAACAAGAAGAACAGGA
TTAGTCCAAGGCATTTATTGTTGGCTGTGAGGAATGATGTAGAACTTGGA
AAATTGTTGGCTGGTGTTACCATTGCTCATGGTGGTGTTCTCCCTAACAT
CAACCCAGTGCTATTGCCCAAGAGAAATGAAAACGCTGCTAGCACTCCCA
AGTCTCCATCAAAGGCCAAGAAATCTCCAAAGAAAGCTTAGATTTAGTTT
CTAGATCTGGTTTGCGACTTGTTGTCGTGTGTATATCTTTGGTTAGGTTC
TTCTTTTGTTGCAGAAAAATCACTGCAATGTAATTGGGGTCTTAATTTCA
CCTCTAGCACAGCAATCTATCTAAAAATAGAAGATATTTTCATTCT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Cellular Component**
Term	Definition
GO:0000786	nucleosome
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006334	nucleosome assembly

Vocabulary: **INTERPRO**
Term	Definition
IPR002119	Histone_H2A
IPR007125	Histone_H2A/H2B/H3
IPR009072	Histone-fold

Search form

Pisum_sativum_v1_Contig2020