Pisum_sativum_v1_Contig2035

Contig Overview
NamePisum_sativum_v1_Contig2035
Unique NamePisum_sativum_v1_Contig2035
Typecontig
OrganismPisum sativum (pea)
Sequence length622
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CD861269ESTCD861269:209..486 +Pisum sativum unigene v1n/a
FG528762ESTFG528762:1..622 +Pisum sativum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
CD861269CD861269Pisum sativumEST
FG528762FG528762Pisum sativumEST


Homology
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BLAST of Pisum_sativum_v1_Contig2035 vs. SwissProt
Match: U2A2B_NICPL (Splicing factor U2af large subunit B OS=Nicotiana plumbaginifolia GN=U2AF65B PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.292e-43
Identity = 83/135 (61.48%), Postives = 103/135 (76.30%), Query Frame = 3 
Query:    3 TTQPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDYEG 407
            TTQPKPEQES+L+HAQQQIALQ+L+ QPA +ATKV+ LT  ++                MR EC KFG+LVNVVIPRP P+G+ + GVGKVFLEY D++ ++KAR  LNGRKFGGN+V+AVFY ENKF +GDY+G
Sbjct:  439 TTQPKPEQESVLLHAQQQIALQRLMLQPATLATKVLSLTEVISADELNDDEDYQDILEDMRTECGKFGSLVNVVIPRPSPNGEPTPGVGKVFLEYADVDSSSKARQSLNGRKFGGNQVVAVFYPENKFYEGDYDG 573
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. SwissProt
Match: U2A2A_NICPL (Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia GN=U2AF65A PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.993e-43
Identity = 83/134 (61.94%), Postives = 100/134 (74.63%), Query Frame = 3 
Query:    3 TTQPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDYE 404
            TTQP PEQES+L+HAQQQIALQ+ + QP  +ATKV+CLT  V                 MR EC KFG LVNVVIPRP P+G  + G+GKVFLEY D++G++KAR GLNGRKFGGN+V+AVFY ENKF++GDYE
Sbjct:  421 TTQPNPEQESVLLHAQQQIALQRFMLQPGALATKVLCLTEVVTVDELNDDDDYQDILEDMRTECEKFGALVNVVIPRPNPNGVPTPGLGKVFLEYADVDGSSKARQGLNGRKFGGNQVVAVFYPENKFSEGDYE 554
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. SwissProt
Match: U2A2B_ARATH (Splicing factor U2af large subunit B OS=Arabidopsis thaliana GN=U2AF65B PE=2 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 9.628e-42
Identity = 81/132 (61.36%), Postives = 99/132 (75.00%), Query Frame = 3 
Query:    9 QPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDYE 404
            QPKPEQE +L++AQQQIALQ+L+FQP    TK+VCLT  V                 MRQE  KFG LVNVVIPRP PD D + GVGKVFLEY D++G++KAR+G+NGRKFGGN+V+AV+Y E+K+AQGDYE
Sbjct:  457 QPKPEQEEVLLYAQQQIALQRLMFQPGGTPTKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQGDYE 588
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. SwissProt
Match: U2A2A_ARATH (Splicing factor U2af large subunit A OS=Arabidopsis thaliana GN=U2AF65A PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 6.458e-38
Identity = 76/133 (57.14%), Postives = 93/133 (69.92%), Query Frame = 3 
Query:    3 TTQPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDY 401
            T   KPEQE++L+HAQQQIA Q+++ QP  VAT VVCLT  V                 MRQE  KFG L NVVIPRP P+G+   G+GKVFL+Y D +G+T+AR G+NGRKFGGNEV+AV+Y E+KF QGDY
Sbjct:  439 TMLQKPEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGKVFLKYADTDGSTRARFGMNGRKFGGNEVVAVYYPEDKFEQGDY 571
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. SwissProt
Match: U2A2B_WHEAT (Splicing factor U2af large subunit B OS=Triticum aestivum GN=U2AF65B PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.186e-37
Identity = 74/134 (55.22%), Postives = 92/134 (68.66%), Query Frame = 3 
Query:    3 TTQPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDYE 404
            + QP+PEQE+IL+ AQQQ+ LQKL++Q   + TKVVCLT  V                 MR E  K+G LV VVIPRP P G+   GVGKVFLEY D++G+TKA+T ++GRKFGGN V+AVFY ENKFA  DY+
Sbjct:  407 SAQPRPEQENILLQAQQQVQLQKLVYQVGALPTKVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKYGNLVKVVIPRPHPSGEPVSGVGKVFLEYADVDGSTKAKTAMHGRKFGGNPVVAVFYPENKFADEDYD 540
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. SwissProt
Match: U2A2B_ORYSJ (Splicing factor U2af large subunit B OS=Oryza sativa subsp. japonica GN=U2AF65B PE=2 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.078e-36
Identity = 73/132 (55.30%), Postives = 91/132 (68.94%), Query Frame = 3 
Query:    9 QPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDYE 404
            QP+PEQESIL+ AQQQ+ LQKL++Q   + TKVVCLT  V+                MR E  K+G L+ VVIPRP P G    GVGKVFLEY D++GATKA+T ++GRKFGGN V+AVFY ENKF+  +Y+
Sbjct:  416 QPRPEQESILLQAQQQVQLQKLVYQVGALPTKVVCLTQVVSADELKDDEEYEDIMEDMRLEAGKYGNLIKVVIPRPDPSGLPVAGVGKVFLEYADVDGATKAKTAMHGRKFGGNPVVAVFYPENKFSSAEYD 547
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. SwissProt
Match: U2A2A_ORYSJ (Splicing factor U2af large subunit A OS=Oryza sativa subsp. japonica GN=U2AF65A PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 3.317e-34
Identity = 70/136 (51.47%), Postives = 93/136 (68.38%), Query Frame = 3 
Query:    6 TQPKPEQESILMHAQQQIALQKLIFQPA--LVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDYEG 407
            +QP+PEQES+L+H QQQ  +QKL+FQ     + TKVVCLT  V+P               MR+E  ++G LV VVIPRP P G    GVG+VFLE+ D+E +TKA+ G++GRKF  N+V+AVFY E+KFA+G Y+G
Sbjct:  439 SQPRPEQESMLLHVQQQAQMQKLMFQVGGGALPTKVVCLTQVVSPDELRDDEEYEDIVQDMREEGCRYGNLVKVVIPRPDPSGAPVAGVGRVFLEFADVESSTKAKNGMHGRKFANNQVVAVFYPEDKFAEGQYDG 574
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. SwissProt
Match: U2AF2_CAEBR (Splicing factor U2AF 65 kDa subunit OS=Caenorhabditis briggsae GN=uaf-1 PE=3 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 2.557e-10
Identity = 33/97 (34.02%), Postives = 51/97 (52.58%), Query Frame = 3 
Query:   96 ATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKF 386
            AT+++CL N V                 +R+ECSK+G + ++ IPRP  D  + G VGKVF+E+       +A+  L GRKF    V+  +Y  +K+
Sbjct:  387 ATEILCLMNMVTEDELRSDEDYEEILEDVREECSKYGIVRSLEIPRPYDDHPVPG-VGKVFVEFATTSDCQRAQAALTGRKFANRTVVTSYYDVDKY 482
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. SwissProt
Match: U2AF2_CAEEL (Splicing factor U2AF 65 kDa subunit OS=Caenorhabditis elegans GN=uaf-1 PE=1 SV=2)

HSP 1 Score: 65.0846 bits (157), Expect = 3.340e-10
Identity = 33/97 (34.02%), Postives = 50/97 (51.55%), Query Frame = 3 
Query:   96 ATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKF 386
            AT+++CL N V                 +R ECSK+G + ++ IPRP  D  + G VGKVF+E+       +A+  L GRKF    V+  +Y  +K+
Sbjct:  396 ATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPG-VGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKY 491
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. SwissProt
Match: U2AF2_MOUSE (Splicing factor U2AF 65 kDa subunit OS=Mus musculus GN=U2af2 PE=1 SV=3)

HSP 1 Score: 64.6994 bits (156), Expect = 4.362e-10
Identity = 34/101 (33.66%), Postives = 51/101 (50.50%), Query Frame = 3 
Query:   99 TKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDY 401
            T+V+CL N V P               +R ECSK+G + ++ IPRP  DG    G GK+F+E+  +    KA  GL GRKF    V+  +   + + + D+
Sbjct:  375 TEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPV-DGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 474
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. TrEMBL
Match: D7SPG8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018993001 PE=4 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.487e-42
Identity = 85/134 (63.43%), Postives = 103/134 (76.87%), Query Frame = 3 
Query:    6 TQPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDYEG 407
            +QPKPEQE++L+HAQQQIALQ+L+FQP  +ATKVVCLT  V                 MR E  KFG LVNV IPRP+P+G+ + G+GKVFLEY DI+GATKARTGLNGRKF GN+V+AVFY ENKF+QG+Y+G
Sbjct:  260 SQPKPEQENVLLHAQQQIALQRLMFQPGALATKVVCLTQVVNADELQDDEAYEDIVEDMRIEGGKFGNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGATKARTGLNGRKFDGNQVVAVFYPENKFSQGEYDG 393
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. TrEMBL
Match: Q9FYW5_SOLLC (BAC19.11 OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.234e-41
Identity = 82/134 (61.19%), Postives = 101/134 (75.37%), Query Frame = 3 
Query:    3 TTQPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDYE 404
            TTQP PEQES+L+HAQQQIALQ+ + QP  +ATKV+CLT  V+                MR EC KFG L+NVVIPRP P+G+ + G+GKVFLEY D++ ++KAR GLNGRKFGGN+VIAVFY ENKF++GDYE
Sbjct:  398 TTQPNPEQESVLLHAQQQIALQRFMLQPGALATKVLCLTEVVSVDELKDDDDYQDILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGGNQVIAVFYPENKFSEGDYE 531
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. TrEMBL
Match: A9XLG6_SOLBU (Putative uncharacterized protein OS=Solanum bulbocastanum GN=11.POTATO.10 PE=4 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.234e-41
Identity = 82/134 (61.19%), Postives = 101/134 (75.37%), Query Frame = 3 
Query:    3 TTQPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDYE 404
            TTQP PEQES+L+HAQQQIALQ+ + QP  +ATKV+CLT  V+                MR EC KFG L+NVVIPRP P+G+ + G+GKVFLEY D++ ++KAR GLNGRKFGGN+VIAVFY ENKF++GDYE
Sbjct:  424 TTQPNPEQESVLLHAQQQIALQRFMLQPGALATKVLCLTEVVSVDELKDDDDYQDILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGGNQVIAVFYPENKFSEGDYE 557
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. TrEMBL
Match: A5BUJ8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032193 PE=4 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.234e-41
Identity = 84/134 (62.69%), Postives = 102/134 (76.12%), Query Frame = 3 
Query:    6 TQPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDYEG 407
            +QPKPEQE++L+HAQQQIALQ+L+FQP  +ATKVVCLT  V                 MR E  KFG LVNV IPRP+P+G+ + G+GKVFLEY DI+GA KARTGLNGRKF GN+V+AVFY ENKF+QG+Y+G
Sbjct:  432 SQPKPEQENVLLHAQQQIALQRLMFQPGALATKVVCLTQVVNADELQDDEAYEDIVEDMRIEGGKFGNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGAXKARTGLNGRKFDGNQVVAVFYPENKFSQGEYDG 565
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. TrEMBL
Match: A9XLE6_CAPFR (Putative uncharacterized protein OS=Capsicum frutescens GN=11.PEPPER.10 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.691e-41
Identity = 81/134 (60.45%), Postives = 100/134 (74.63%), Query Frame = 3 
Query:    3 TTQPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDYE 404
            T QP PEQES+L+HAQQQIALQ+ + QP  +ATKV+CLT  V+                MR EC KFG+L+NVVIPRP P G+ + G+GKVFLEY D+E +++AR GLNGRKFGGNEVIAVFY ENKF++G+YE
Sbjct:  417 TNQPNPEQESVLLHAQQQIALQRFMLQPGALATKVLCLTQVVSVDELNDDDDYQDILEDMRVECGKFGSLLNVVIPRPNPSGEPTPGLGKVFLEYADVESSSRARQGLNGRKFGGNEVIAVFYPENKFSEGEYE 550
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. TrEMBL
Match: C0IXK1_SOLME (U2 snRNP auxiliary factor large subunit OS=Solanum melongena PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.126e-41
Identity = 80/133 (60.15%), Postives = 100/133 (75.19%), Query Frame = 3 
Query:    6 TQPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDYE 404
            TQP PEQES+L+HAQQQIALQ+ + QP  +ATK++CLT  V+                MR EC KFG L+NVVIPRP P+G+ + G+GKVFLEY D++ ++KAR GLNGRKFGGN+VIAVFY ENKF++GDYE
Sbjct:  419 TQPNPEQESVLLHAQQQIALQRFMLQPGALATKILCLTQVVSVDELKDDDDYQDILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGGNQVIAVFYPENKFSEGDYE 551
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. TrEMBL
Match: A9XLD1_SOLME (Putative uncharacterized protein OS=Solanum melongena GN=11.EGGPLANT.5 PE=4 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.126e-41
Identity = 80/133 (60.15%), Postives = 100/133 (75.19%), Query Frame = 3 
Query:    6 TQPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDYE 404
            TQP PEQES+L+HAQQQIALQ+ + QP  +ATK++CLT  V+                MR EC KFG L+NVVIPRP P+G+ + G+GKVFLEY D++ ++KAR GLNGRKFGGN+VIAVFY ENKF++GDYE
Sbjct:  418 TQPNPEQESVLLHAQQQIALQRFMLQPGALATKILCLTQVVSVDELKDDDDYQDILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGGNQVIAVFYPENKFSEGDYE 550
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. TrEMBL
Match: B9HEU4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_719459 PE=4 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.001e-41
Identity = 82/134 (61.19%), Postives = 99/134 (73.88%), Query Frame = 3 
Query:    3 TTQPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDYE 404
            T QPKPEQE++L+HAQQQIALQ+L+ QP  V TKVVCLT  V                 +R E  KFG LVNVVIPRP+PDG+ + GVGKVFLEY D EG++KAR G+NGRKFGGN V+AVF+ ENKF+QG+Y+
Sbjct:  260 TNQPKPEQENVLLHAQQQIALQRLMLQPPPVVTKVVCLTQVVTVDELKDDDEYEDILEDIRMEAGKFGQLVNVVIPRPRPDGENAPGVGKVFLEYADTEGSSKARAGMNGRKFGGNHVVAVFFPENKFSQGEYD 393
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. TrEMBL
Match: D7KW76_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_475241 PE=4 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.186e-40
Identity = 80/132 (60.61%), Postives = 97/132 (73.48%), Query Frame = 3 
Query:    9 QPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDYE 404
            QPKPEQE +L+HAQQQIALQ+L+ QP    TK+VCLT  V                 MRQE  KFG LVNVVIPRP PD D + GVGKVFLEY D++G++KAR+G+NGRKFGGN+V+AV+Y E+K+ QGDYE
Sbjct:  457 QPKPEQEEVLLHAQQQIALQRLMLQPGGTPTKIVCLTQVVTADDLRDDEEYADIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYLQGDYE 588
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. TrEMBL
Match: A9XLF0_PETIN (Putative uncharacterized protein OS=Petunia integrifolia subsp. inflata GN=11.PETUNIA.4 PE=4 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.509e-39
Identity = 80/134 (59.70%), Postives = 99/134 (73.88%), Query Frame = 3 
Query:    3 TTQPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDYE 404
            T QP PEQES+L+HAQQQIALQK +FQP  +ATKV+CLT AV+                MR EC KFG L+NVVIPRP P+G+ + G+GK    Y D++G++KAR GLNGRKFGGN+V+AVFY ENKF++GDYE
Sbjct:  426 TPQPNPEQESVLLHAQQQIALQKFMFQPGALATKVLCLTQAVSVDELNDDDDYQDILEDMRTECGKFGALLNVVIPRPNPNGEPTPGIGK----YADVDGSSKARQGLNGRKFGGNQVVAVFYPENKFSEGDYE 555
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. TAIR peptide
Match: AT1G60900.1 (| Symbols: | U2 snRNP auxilliary factor, large subunit, splicing factor | chr1:22424008-22427806 FORWARD LENGTH=589)

HSP 1 Score: 169.859 bits (429), Expect = 9.984e-43
Identity = 81/132 (61.36%), Postives = 99/132 (75.00%), Query Frame = 3 
Query:    9 QPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDYE 404
            QPKPEQE +L++AQQQIALQ+L+FQP    TK+VCLT  V                 MRQE  KFG LVNVVIPRP PD D + GVGKVFLEY D++G++KAR+G+NGRKFGGN+V+AV+Y E+K+AQGDYE
Sbjct:  457 QPKPEQEEVLLYAQQQIALQRLMFQPGGTPTKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQGDYE 588
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. TAIR peptide
Match: AT4G36690.4 (| Symbols: ATU2AF65A | U2 snRNP auxilliary factor, large subunit, splicing factor | chr4:17294139-17297609 REVERSE LENGTH=551)

HSP 1 Score: 157.147 bits (396), Expect = 6.697e-39
Identity = 76/133 (57.14%), Postives = 93/133 (69.92%), Query Frame = 3 
Query:    3 TTQPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDY 401
            T   KPEQE++L+HAQQQIA Q+++ QP  VAT VVCLT  V                 MRQE  KFG L NVVIPRP P+G+   G+GKVFL+Y D +G+T+AR G+NGRKFGGNEV+AV+Y E+KF QGDY
Sbjct:  417 TMLQKPEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGKVFLKYADTDGSTRARFGMNGRKFGGNEVVAVYYPEDKFEQGDY 549
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BLAST of Pisum_sativum_v1_Contig2035 vs. TAIR peptide
Match: AT4G36690.1 (| Symbols: ATU2AF65A | U2 snRNP auxilliary factor, large subunit, splicing factor | chr4:17294139-17297609 REVERSE LENGTH=573)

HSP 1 Score: 157.147 bits (396), Expect = 6.697e-39
Identity = 76/133 (57.14%), Postives = 93/133 (69.92%), Query Frame = 3 
Query:    3 TTQPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDY 401
            T   KPEQE++L+HAQQQIA Q+++ QP  VAT VVCLT  V                 MRQE  KFG L NVVIPRP P+G+   G+GKVFL+Y D +G+T+AR G+NGRKFGGNEV+AV+Y E+KF QGDY
Sbjct:  439 TMLQKPEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGKVFLKYADTDGSTRARFGMNGRKFGGNEVVAVYYPEDKFEQGDY 571
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BLAST of Pisum_sativum_v1_Contig2035 vs. TAIR peptide
Match: AT1G60830.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:22395058-22395603 REVERSE LENGTH=111)

HSP 1 Score: 129.798 bits (325), Expect = 1.145e-30
Identity = 62/110 (56.36%), Postives = 76/110 (69.09%), Query Frame = 3 
Query:   75 IFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFGTLVNVVIPRPQPDGDLSGGVGKVFLEYVDIEGATKARTGLNGRKFGGNEVIAVFYQENKFAQGDYE 404
            + QP    TK+VCLT  V                 M QE  KFG LVNVVIPRP PD D + GVGKVFLEY D++G++KAR+G+NGRKFGGN+V+AV+Y E+K+AQGDYE
Sbjct:    1 MLQPGGTPTKIVCLTQVVTADDLRDDAEYADIMEDMSQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQGDYE 110
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. TAIR peptide
Match: AT4G36690.2 (| Symbols: ATU2AF65A | U2 snRNP auxilliary factor, large subunit, splicing factor | chr4:17294591-17297609 REVERSE LENGTH=542)

HSP 1 Score: 63.5438 bits (153), Expect = 1.008e-10
Identity = 33/68 (48.53%), Postives = 39/68 (57.35%), Query Frame = 3 
Query:    3 TTQPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKFG 206
            T   KPEQE++L+HAQQQIA Q+++ QP  VAT VVCLT  V                 MRQE  KFG
Sbjct:  439 TMLQKPEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKFG 506
[Close]
BLAST of Pisum_sativum_v1_Contig2035 vs. TAIR peptide
Match: AT4G36690.3 (| Symbols: ATU2AF65A | U2 snRNP auxilliary factor, large subunit, splicing factor | chr4:17294422-17297609 REVERSE LENGTH=565)

HSP 1 Score: 61.2326 bits (147), Expect = 5.001e-10
Identity = 32/67 (47.76%), Postives = 38/67 (56.72%), Query Frame = 3 
Query:    3 TTQPKPEQESILMHAQQQIALQKLIFQPALVATKVVCLTNAVAPXXXXXXXXXXXXXXXMRQECSKF 203
            T   KPEQE++L+HAQQQIA Q+++ QP  VAT VVCLT  V                 MRQE  KF
Sbjct:  439 TMLQKPEQENVLLHAQQQIAFQRVMLQPGAVATTVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKF 505
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig2035 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
U2A2B_NICPL2.292e-4361.48Splicing factor U2af large subunit B OS=Nicotiana ... [more]
U2A2A_NICPL2.993e-4361.94Splicing factor U2af large subunit A OS=Nicotiana ... [more]
U2A2B_ARATH9.628e-4261.36Splicing factor U2af large subunit B OS=Arabidopsi... [more]
U2A2A_ARATH6.458e-3857.14Splicing factor U2af large subunit A OS=Arabidopsi... [more]
U2A2B_WHEAT4.186e-3755.22Splicing factor U2af large subunit B OS=Triticum a... [more]
U2A2B_ORYSJ2.078e-3655.30Splicing factor U2af large subunit B OS=Oryza sati... [more]
U2A2A_ORYSJ3.317e-3451.47Splicing factor U2af large subunit A OS=Oryza sati... [more]
U2AF2_CAEBR2.557e-1034.02Splicing factor U2AF 65 kDa subunit OS=Caenorhabdi... [more]
U2AF2_CAEEL3.340e-1034.02Splicing factor U2AF 65 kDa subunit OS=Caenorhabdi... [more]
U2AF2_MOUSE4.362e-1033.66Splicing factor U2AF 65 kDa subunit OS=Mus musculu... [more]
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BLAST of Pisum_sativum_v1_Contig2035 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7SPG8_VITVI2.487e-4263.43Whole genome shotgun sequence of line PN40024, sca... [more]
Q9FYW5_SOLLC1.234e-4161.19BAC19.11 OS=Solanum lycopersicum PE=4 SV=1[more]
A9XLG6_SOLBU1.234e-4161.19Putative uncharacterized protein OS=Solanum bulboc... [more]
A5BUJ8_VITVI1.234e-4162.69Putative uncharacterized protein OS=Vitis vinifera... [more]
A9XLE6_CAPFR4.691e-4160.45Putative uncharacterized protein OS=Capsicum frute... [more]
C0IXK1_SOLME6.126e-4160.15U2 snRNP auxiliary factor large subunit OS=Solanum... [more]
A9XLD1_SOLME6.126e-4160.15Putative uncharacterized protein OS=Solanum melong... [more]
B9HEU4_POPTR8.001e-4161.19Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7KW76_ARALY5.186e-4060.61Putative uncharacterized protein OS=Arabidopsis ly... [more]
A9XLF0_PETIN1.509e-3959.70Putative uncharacterized protein OS=Petunia integr... [more]
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BLAST of Pisum_sativum_v1_Contig2035 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 6
Match NameE-valueIdentityDescription
AT1G60900.19.984e-4361.36| Symbols: | U2 snRNP auxilliary factor, large su... [more]
AT4G36690.46.697e-3957.14| Symbols: ATU2AF65A | U2 snRNP auxilliary factor,... [more]
AT4G36690.16.697e-3957.14| Symbols: ATU2AF65A | U2 snRNP auxilliary factor,... [more]
AT1G60830.11.145e-3056.36| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
AT4G36690.21.008e-1048.53| Symbols: ATU2AF65A | U2 snRNP auxilliary factor,... [more]
AT4G36690.35.001e-1047.76| Symbols: ATU2AF65A | U2 snRNP auxilliary factor,... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 58..118
score: 5.1
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330no descriptioncoord: 34..123
score: 4.6
NoneNo IPR availablePANTHERPTHR23139RNA-BINDING PROTEINcoord: 1..130
score: 2.5
NoneNo IPR availablePANTHERPTHR23139:SF9SPLICING FACTOR U2AF LARGE SUBUNITcoord: 1..130
score: 2.5
NoneNo IPR availableSEGsegsegcoord: 45..59
score
NoneNo IPR availableSUPERFAMILY54928RNA-binding domain, RBDcoord: 25..130
score: 2.8
NoneNo IPR availableSEGsegsegcoord: 60..78
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig2035 ID=Pisum_sativum_v1_Contig2035; Name=Pisum_sativum_v1_Contig2035; organism=Pisum sativum; type=contig; length=622bp
GGACAACCCAGCCTAAACCTGAACAAGAGAGCATTTTAATGCATGCACAA
CAGCAAATTGCTCTGCAGAAACTTATATTTCAACCAGCATTAGTAGCTAC
AAAGGTGGTGTGTTTAACCAACGCAGTTGCTCCTGACGAGCTCAAGGAAG
ATGAGGACTTTGAAGAAATTATCGATGATATGAGACAGGAATGCTCCAAA
TTTGGTACTTTGGTGAATGTTGTGATCCCTCGCCCACAACCAGATGGGGA
TCTATCTGGTGGAGTTGGAAAGGTGTTTTTGGAATATGTAGATATTGAGG
GTGCTACAAAAGCCCGCACTGGATTGAATGGGAGAAAATTCGGTGGAAAT
GAAGTAATAGCCGTTTTCTATCAAGAGAATAAGTTTGCTCAGGGGGATTA
TGAAGGCTAATTGCTGTAATGTCACTTGGATTATATCTCAAATTTTCATG
TATGTTGTGAGATTGTTCAATATAAGTTTCTTTATTTCTTGTACACCGAG
GTGGGAGCGGAGAAACTGATAGCTTCTGTTCTTAACTTGGATTTTTTTTT
CATTTGATTGATAAATAATACTAGTTGATAATTTGTAACTTGTCATATCT
TATGCTCTCTATCTGTGATATC
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf