Pisum_sativum_v1_Contig2042

Contig Overview
NamePisum_sativum_v1_Contig2042
Unique NamePisum_sativum_v1_Contig2042
Typecontig
OrganismPisum sativum (pea)
Sequence length661
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GH720849ESTGH720849:1..623 +
GH720843ESTGH720843:1..656 +
GH720699ESTGH720699:1..640 +
GH720302ESTGH720302:1..656 +
GH720462ESTGH720462:17..657 +
GH720928ESTGH720928:4..659 +
CD861218ESTCD861218:26..638 -
GH720813ESTGH720813:5..661 -
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GH720849GH720849Pisum sativumEST
GH720843GH720843Pisum sativumEST
GH720699GH720699Pisum sativumEST
GH720302GH720302Pisum sativumEST
GH720462GH720462Pisum sativumEST
GH720928GH720928Pisum sativumEST
CD861218CD861218Pisum sativumEST
GH720813GH720813Pisum sativumEST


Homology
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BLAST of Pisum_sativum_v1_Contig2042 vs. TrEMBL
Match: B7FMV5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.150e-41
Identity = 103/215 (47.91%), Postives = 116/215 (53.95%), Query Frame = -2 
Query:   67 KIHGYPQQQYYGDDSSWMETKAQQLQSQGYPQT------------QQYP----GMKPG-YGKDSDYSMP-----------NHNMYHQDSKPRXXXXXXXXXXXXXXXXGQAFPFGATTNHSPQXXXXXXXXXXXH---NDYVSEHE---YEVYKEERIGSGATKRDEVRYERRGTYGGDVHQASPYGYNNN--------PHGHGAKKGNWTLKGV 585
            K  GYPQQQ YG+D  WME KAQQ QS G+ Q             QQ+P     MKPG +GK+SD+S             NHNM+HQDS                    Q FPFGAT  HSP                NDYVSEHE   +E YKEE +GSGA+K DE+RYER GTYGGDVH A+PYGYNNN         HGHG+ K NWTLKGV
Sbjct:    4 KFLGYPQQQCYGEDGMWMEAKAQQQQSHGFHQDSYTTDHSNYYDKQQFPLPAMHMKPGGFGKESDHSFSKHHGHGSNIGGNHNMFHQDSMSNGHGFGNNNHGHGNG---QKFPFGATNKHSPHHGGGVRPFNHHGGGHNDYVSEHEEYEFEAYKEECVGSGASKMDEMRYERHGTYGGDVHYANPYGYNNNNRIKPHGHGHGHGSHKVNWTLKGV 215
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig2042 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
B7FMV5_MEDTR7.150e-4147.91Putative uncharacterized protein OS=Medicago trunc... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 12..29
score
NoneNo IPR availableSEGsegsegcoord: 8..24
score
NoneNo IPR availableSEGsegsegcoord: 78..94
score: NAcoord: 109..120
score
NoneNo IPR availableSEGsegsegcoord: 6..21
score: NAcoord: 25..42
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig2042 ID=Pisum_sativum_v1_Contig2042; Name=Pisum_sativum_v1_Contig2042; organism=Pisum sativum; type=contig; length=661bp
TAGCGTGGTCGCGGCCGAGGTACTGGCTGGATTCAGAGGTAGTAACAACA
GTAACCAAGCATATTAGACTCCCTTTAGTGTCCAGTTGCCTTTCTTTGCT
CCATGACCATGAGGATTATTATTGTATCCATATGGGCTGGCCTGATGAAC
ATCTCCTCCATATGTTCCACGCCTTTCATATCTCACTTCATCCCTCTTCG
TCGCGCCAGAACCAATACGCTCTTCCTTGTAAACTTCATACTCATGCTCT
GACACATAGTCATTGTGGCCACCACCACCGTGTTTGAATGGCTTACCATG
TTGAGGTGAGTGATTAGTGGTAGCACCAAAAGGGAATGCTTGGCCATTGC
CATAACCATGATTATTATCATAGTTATGACCATGACCATGGTCACGAGGC
TTGCTGTCCTGATGATACATATTATGATTTGGCATGGAGTAATCAGAATC
CTTGCCATAACCTGGTTTCATGCCTGGATATTGCTGTGTCTGTGGATATC
CTTGGCTCTGTAGCTGTTGAGCCTTAGTTTCCATCCACGAGCTATCATCG
CCATAGTATTGCTGTTGTGGGTATCCATGGATCTTCCTGCTTTGCATCTT
GTTGGAGGAATGGAAAGTATCAATTCACACAAGTTTTGCTACCTCGGCCG
CGACCACGCTA
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