Pisum_sativum_v1_Contig2056
Contig Overview
Alignments
The following features are aligned
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
Homology
BLAST of Pisum_sativum_v1_Contig2056 vs. SwissProt
Match: Y3972_ARATH (Uncharacterized protein At3g49720 OS=Arabidopsis thaliana GN=At3g49720 PE=1 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.379e-50 Identity = 95/124 (76.61%), Postives = 108/124 (87.10%), Query Frame = 3 Query: 18 VRKGIVRVADIKFPLPYRAKSFSLVIVPDALDYLSPKYLNKTLPELVRVSSDSVVIFSGYPGQQRVRGEQLAKFGRPAKLRSSSWWIRFFVQTSLEENDTAGKKFQQASAKKAYAPACQVFHLK 389 V KG+VRVADIKFPLPYRAKSFSLVIV DALDYLSPKYLNKT+PEL RV+SD VV+F+G PGQQR + +L+KFGRPAK+RS+SWW RFFVQT+LEEND KKF+QA +K Y PACQVFHLK Sbjct: 135 VSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPELARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFEQAVSKGLYKPACQVFHLK 258
BLAST of Pisum_sativum_v1_Contig2056 vs. TrEMBL
Match: C6TGX2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 4.160e-58 Identity = 109/126 (86.51%), Postives = 121/126 (96.03%), Query Frame = 3 Query: 18 VRKGIVRVADIKFPLPYRAKSFSLVIVPDALDYLSPKYLNKTLPELVRVSSDSVVIFSGYPGQQRVRGEQLAKFGRPAKLRSSSWWIRFFVQTSLEENDTAGKKFQQASAKKAYAPACQVFHLKSF 395 VRKGIVRVAD+KF LPYRAKSFSLVIV DALDYLSP+YLNKTLPELVRVS+D VVIF+GYPGQQR RGE++AKFGRPAKLRSSSWWIRFFVQ+SL+EN+TAGKKF+QASAKKAY PACQ+FHLKS+ Sbjct: 136 VRKGIVRVADLKFSLPYRAKSFSLVIVSDALDYLSPRYLNKTLPELVRVSADGVVIFAGYPGQQRTRGEEVAKFGRPAKLRSSSWWIRFFVQSSLDENETAGKKFEQASAKKAYKPACQIFHLKSY 261
BLAST of Pisum_sativum_v1_Contig2056 vs. TrEMBL
Match: C6TL75_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.581e-57 Identity = 109/126 (86.51%), Postives = 119/126 (94.44%), Query Frame = 3 Query: 18 VRKGIVRVADIKFPLPYRAKSFSLVIVPDALDYLSPKYLNKTLPELVRVSSDSVVIFSGYPGQQRVRGEQLAKFGRPAKLRSSSWWIRFFVQTSLEENDTAGKKFQQASAKKAYAPACQVFHLKSF 395 VRKGIVRVADIKF LPYRAKSFSLVIV DALDYLSP+YLNKTLPELVRVS+D VVIF+GYPGQQ+ RGE++AKFGRPAKLRSSSWWIRFFVQ SL+ENDTAGKK++QAS KKAY PACQVFHLKS+ Sbjct: 135 VRKGIVRVADIKFSLPYRAKSFSLVIVSDALDYLSPRYLNKTLPELVRVSADGVVIFTGYPGQQKTRGEEVAKFGRPAKLRSSSWWIRFFVQISLDENDTAGKKYEQASTKKAYKPACQVFHLKSY 260
BLAST of Pisum_sativum_v1_Contig2056 vs. TrEMBL
Match: B9SX84_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0859430 PE=4 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 5.818e-52 Identity = 96/126 (76.19%), Postives = 114/126 (90.48%), Query Frame = 3 Query: 18 VRKGIVRVADIKFPLPYRAKSFSLVIVPDALDYLSPKYLNKTLPELVRVSSDSVVIFSGYPGQQRVRGEQLAKFGRPAKLRSSSWWIRFFVQTSLEENDTAGKKFQQASAKKAYAPACQVFHLKSF 395 +RKGIVRVADIKFPLPYR KSFSLVIV DALDYLSPKYLN+TLPEL RV++D +VI++GYPGQQR + +L+KFGRPAK+RSSSWW+RFFVQTS+EEN+TA KKF+QA +KK+Y P CQVFHLK + Sbjct: 122 IRKGIVRVADIKFPLPYRTKSFSLVIVSDALDYLSPKYLNRTLPELARVAADGLVIYAGYPGQQRAKVAELSKFGRPAKMRSSSWWVRFFVQTSIEENETAMKKFEQAISKKSYKPTCQVFHLKPY 247
BLAST of Pisum_sativum_v1_Contig2056 vs. TrEMBL
Match: B9S7U0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1381640 PE=4 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 9.924e-52 Identity = 96/126 (76.19%), Postives = 112/126 (88.89%), Query Frame = 3 Query: 18 VRKGIVRVADIKFPLPYRAKSFSLVIVPDALDYLSPKYLNKTLPELVRVSSDSVVIFSGYPGQQRVRGEQLAKFGRPAKLRSSSWWIRFFVQTSLEENDTAGKKFQQASAKKAYAPACQVFHLKSF 395 VRKG+VRVADIKFPLPYRAKSFSLVIV DALDYLSP+YLNKTLPEL RVS+D V+IFSGYPGQ + + +L+KFGRPAK RSS+WWIR+F+Q SLEEN+ A KKF+QAS K++Y P CQVFHLKS+ Sbjct: 135 VRKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPRYLNKTLPELARVSADGVIIFSGYPGQHKAKVAELSKFGRPAKFRSSTWWIRYFLQNSLEENEAASKKFEQASVKRSYKPGCQVFHLKSY 260
BLAST of Pisum_sativum_v1_Contig2056 vs. TrEMBL
Match: D7T3K6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_88.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00036990001 PE=4 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.296e-51 Identity = 99/125 (79.20%), Postives = 112/125 (89.60%), Query Frame = 3 Query: 18 VRKGIVRVADIKFPLPYRAKSFSLVIVPDALDYLSPKYLNKTLPELVRVSSDSVVIFSGYPGQQRVRGEQLAKFGRPAKLRSSSWWIRFFVQTSLEENDTAGKKFQQASAKKAYAPACQVFHLKS 392 VRKGIVRVADIKFPLPYRAKSFSLVI+ DA DYLSPKYLN+TLPEL RVS++ +VIF+GYPGQ R + +L+KFGRPAKLRSSSWWIRFFVQTSLEEN+ A KKF+Q S K++Y PACQVFHLKS Sbjct: 136 VRKGIVRVADIKFPLPYRAKSFSLVIMSDASDYLSPKYLNRTLPELARVSAEGLVIFAGYPGQHRAKVAELSKFGRPAKLRSSSWWIRFFVQTSLEENEAATKKFEQTSMKRSYKPACQVFHLKS 260
BLAST of Pisum_sativum_v1_Contig2056 vs. TrEMBL
Match: A5B1Q6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026367 PE=4 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.296e-51 Identity = 99/125 (79.20%), Postives = 112/125 (89.60%), Query Frame = 3 Query: 18 VRKGIVRVADIKFPLPYRAKSFSLVIVPDALDYLSPKYLNKTLPELVRVSSDSVVIFSGYPGQQRVRGEQLAKFGRPAKLRSSSWWIRFFVQTSLEENDTAGKKFQQASAKKAYAPACQVFHLKS 392 VRKGIVRVADIKFPLPYRAKSFSLVI+ DA DYLSPKYLN+TLPEL RVS++ +VIF+GYPGQ R + +L+KFGRPAKLRSSSWWIRFFVQTSLEEN+ A KKF+Q S K++Y PACQVFHLKS Sbjct: 45 VRKGIVRVADIKFPLPYRAKSFSLVIMSDASDYLSPKYLNRTLPELARVSAEGLVIFAGYPGQHRAKVAELSKFGRPAKLRSSSWWIRFFVQTSLEENEAATKKFEQTSMKRSYKPACQVFHLKS 169
BLAST of Pisum_sativum_v1_Contig2056 vs. TrEMBL
Match: A5BL67_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037838 PE=4 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.925e-51 Identity = 98/126 (77.78%), Postives = 112/126 (88.89%), Query Frame = 3 Query: 18 VRKGIVRVADIKFPLPYRAKSFSLVIVPDALDYLSPKYLNKTLPELVRVSSDSVVIFSGYPGQQRVRGEQLAKFGRPAKLRSSSWWIRFFVQTSLEENDTAGKKFQQASAKKAYAPACQVFHLKSF 395 VRK IVRVADIKFP+PYR KSFSLVIV DALDYLSPKYLNKTLP+L RVSSD +VIF+G PGQQ+ + +L+KFGRPAK+RSSSWWIR+FVQTSLEEN+ A KKF QA+AKK+Y PACQVFHL S+ Sbjct: 130 VRKSIVRVADIKFPMPYRPKSFSLVIVSDALDYLSPKYLNKTLPDLARVSSDGLVIFAGLPGQQKAKVAELSKFGRPAKMRSSSWWIRYFVQTSLEENEAAIKKFDQAAAKKSYKPACQVFHLNSY 255
BLAST of Pisum_sativum_v1_Contig2056 vs. TrEMBL
Match: A9PBS0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_821310 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 8.401e-51 Identity = 96/126 (76.19%), Postives = 114/126 (90.48%), Query Frame = 3 Query: 18 VRKGIVRVADIKFPLPYRAKSFSLVIVPDALDYLSPKYLNKTLPELVRVSSDSVVIFSGYPGQQRVRGEQLAKFGRPAKLRSSSWWIRFFVQTSLEENDTAGKKFQQASAKKAYAPACQVFHLKSF 395 VRKG+VRVADIKFPLPYR KSFSLVIV DALDYLSPKYLNKTLPEL RVS+D +V+FSG PGQQRV+ +L+KFGRPAK R+S+WWIR+FVQT L+EN++A KKF+QA+ KK+Y PACQVFHL+S+ Sbjct: 136 VRKGLVRVADIKFPLPYRPKSFSLVIVSDALDYLSPKYLNKTLPELARVSADGLVVFSGAPGQQRVKVAELSKFGRPAKFRTSTWWIRYFVQTGLQENESALKKFEQAALKKSYKPACQVFHLQSY 261
BLAST of Pisum_sativum_v1_Contig2056 vs. TrEMBL
Match: A9PCB1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_707473 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.433e-50 Identity = 97/125 (77.60%), Postives = 112/125 (89.60%), Query Frame = 3 Query: 18 VRKGIVRVADIKFPLPYRAKSFSLVIVPDALDYLSPKYLNKTLPELVRVSSDSVVIFSGYPGQQRVRGEQLAKFGRPAKLRSSSWWIRFFVQTSLEENDTAGKKFQQASAKKAYAPACQVFHLKS 392 VRKG+VRVADIKFPLPYRAKSFSLV+V DALDYLSPKYLNKTLPEL RVS+D +VIFSG+PGQQRV+ +++KFGRPAK RSSSWWIR+FVQ L+ N+ A KKF+QAS KK+Y PACQVFHL+S Sbjct: 136 VRKGLVRVADIKFPLPYRAKSFSLVVVSDALDYLSPKYLNKTLPELARVSADGLVIFSGHPGQQRVKVAEMSKFGRPAKFRSSSWWIRYFVQIGLQVNEPAIKKFEQASLKKSYKPACQVFHLQS 260
BLAST of Pisum_sativum_v1_Contig2056 vs. TrEMBL
Match: D7MUM3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_332797 PE=4 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 9.289e-50 Identity = 93/124 (75.00%), Postives = 112/124 (90.32%), Query Frame = 3 Query: 18 VRKGIVRVADIKFPLPYRAKSFSLVIVPDALDYLSPKYLNKTLPELVRVSSDSVVIFSGYPGQQRVRGEQLAKFGRPAKLRSSSWWIRFFVQTSLEENDTAGKKFQQASAKKAYAPACQVFHLK 389 + KG+VRVADIKFPLPYR+KSFSLVIV DALDYLSP+YLNKT+PEL RV+SD VV+F+G PGQQ+ +G +L+KFGRPAK+RSSSWWIRFF QT+LEEN+ A KKF+QA++K +Y PACQVFHLK Sbjct: 132 LHKGLVRVADIKFPLPYRSKSFSLVIVSDALDYLSPRYLNKTVPELARVASDGVVLFAGNPGQQKAKGAELSKFGRPAKMRSSSWWIRFFSQTNLEENEAAIKKFEQAASKSSYKPACQVFHLK 255
BLAST of Pisum_sativum_v1_Contig2056 vs. TAIR peptide
Match: AT5G65810.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49720.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:26337833-26339144 REVERSE LENGTH=258) HSP 1 Score: 199.519 bits (506), Expect = 1.407e-51 Identity = 92/124 (74.19%), Postives = 111/124 (89.52%), Query Frame = 3 Query: 18 VRKGIVRVADIKFPLPYRAKSFSLVIVPDALDYLSPKYLNKTLPELVRVSSDSVVIFSGYPGQQRVRGEQLAKFGRPAKLRSSSWWIRFFVQTSLEENDTAGKKFQQASAKKAYAPACQVFHLK 389 + KG+VRVADIKFPLPYR+KSFSLVIV DALDYLSP+YLNKT+PEL RV+SD VV+ +G PGQQ+ +G +L+KFGRPAK+RSSSWWIRFF QT+LEEN+ A KKF+QA++K +Y PACQVFHLK Sbjct: 132 LHKGLVRVADIKFPLPYRSKSFSLVIVSDALDYLSPRYLNKTVPELARVASDGVVLLAGNPGQQKAKGGELSKFGRPAKMRSSSWWIRFFSQTNLEENEAASKKFEQAASKSSYKPACQVFHLK 255
BLAST of Pisum_sativum_v1_Contig2056 vs. TAIR peptide
Match: AT3G49720.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:18440192-18441655 REVERSE LENGTH=261) HSP 1 Score: 198.749 bits (504), Expect = 2.401e-51 Identity = 95/124 (76.61%), Postives = 108/124 (87.10%), Query Frame = 3 Query: 18 VRKGIVRVADIKFPLPYRAKSFSLVIVPDALDYLSPKYLNKTLPELVRVSSDSVVIFSGYPGQQRVRGEQLAKFGRPAKLRSSSWWIRFFVQTSLEENDTAGKKFQQASAKKAYAPACQVFHLK 389 V KG+VRVADIKFPLPYRAKSFSLVIV DALDYLSPKYLNKT+PEL RV+SD VV+F+G PGQQR + +L+KFGRPAK+RS+SWW RFFVQT+LEEND KKF+QA +K Y PACQVFHLK Sbjct: 135 VSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPELARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFEQAVSKGLYKPACQVFHLK 258
BLAST of Pisum_sativum_v1_Contig2056 vs. TAIR peptide
Match: AT3G49720.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:18440192-18441655 REVERSE LENGTH=261) HSP 1 Score: 198.749 bits (504), Expect = 2.401e-51 Identity = 95/124 (76.61%), Postives = 108/124 (87.10%), Query Frame = 3 Query: 18 VRKGIVRVADIKFPLPYRAKSFSLVIVPDALDYLSPKYLNKTLPELVRVSSDSVVIFSGYPGQQRVRGEQLAKFGRPAKLRSSSWWIRFFVQTSLEENDTAGKKFQQASAKKAYAPACQVFHLK 389 V KG+VRVADIKFPLPYRAKSFSLVIV DALDYLSPKYLNKT+PEL RV+SD VV+F+G PGQQR + +L+KFGRPAK+RS+SWW RFFVQT+LEEND KKF+QA +K Y PACQVFHLK Sbjct: 135 VSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPELARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFEQAVSKGLYKPACQVFHLK 258 The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig2056 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 1
BLAST of Pisum_sativum_v1_Contig2056 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of Pisum_sativum_v1_Contig2056 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 3
Sequences
The
following sequences are available for this feature:
contig sequence >Pisum_sativum_v1_Contig2056 ID=Pisum_sativum_v1_Contig2056; Name=Pisum_sativum_v1_Contig2056; organism=Pisum sativum; type=contig; length=691bpback to top |