Pisum_sativum_v1_Contig2060

Contig Overview


Name	Pisum_sativum_v1_Contig2060
Unique Name	Pisum_sativum_v1_Contig2060
Type	contig
Organism	Pisum sativum (pea)
Sequence length	580

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
GH720720	EST	GH720720:1..352 -	Pisum sativum unigene v1	n/a
FG529683	EST	FG529683:142..346 +	Pisum sativum unigene v1	n/a
FG537538	EST	FG537538:109..411 +	Pisum sativum unigene v1	n/a
EX570273	EST	EX570273:357..515 +	Pisum sativum unigene v1	n/a
FG534215	EST	FG534215:165..576 +	Pisum sativum unigene v1	n/a
EX570274	EST	EX570274:302..580 +	Pisum sativum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
KEGG analysis for Pisum sativum unigene v1	2011-01-05
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GH720720	GH720720	Pisum sativum	EST
FG529683	FG529683	Pisum sativum	EST
FG537538	FG537538	Pisum sativum	EST
EX570273	EX570273	Pisum sativum	EST
FG534215	FG534215	Pisum sativum	EST
EX570274	EX570274	Pisum sativum	EST

Homology

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. SwissProt
Match: H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 175.252 bits (443), Expect = 2.007e-43
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   57 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. SwissProt
Match: H2B7_ARATH (Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030 PE=1 SV=3)

HSP 1 Score: 174.866 bits (442), Expect = 2.622e-43
Identity = 89/92 (96.74%), Postives = 92/92 (100.00%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA+ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   54 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. SwissProt
Match: H2B6_ARATH (Histone H2B.6 OS=Arabidopsis thaliana GN=H2B PE=1 SV=3)

HSP 1 Score: 174.866 bits (442), Expect = 2.622e-43
Identity = 89/92 (96.74%), Postives = 92/92 (100.00%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA+ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   59 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. SwissProt
Match: H2B3_MEDTR (Probable histone H2B.3 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 174.866 bits (442), Expect = 2.622e-43
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            SVETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   47 SVETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 138

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. SwissProt
Match: H2B_GOSHI (Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 174.096 bits (440), Expect = 4.472e-43
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA E+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   56 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. SwissProt
Match: H2B_CAPAN (Histone H2B OS=Capsicum annuum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 173.711 bits (439), Expect = 5.841e-43
Identity = 88/92 (95.65%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            S+ETYKIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   54 SIETYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. SwissProt
Match: H2B10_ARATH (Histone H2B.10 OS=Arabidopsis thaliana GN=At5g22880 PE=1 SV=3)

HSP 1 Score: 173.326 bits (438), Expect = 7.628e-43
Identity = 88/92 (95.65%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            +VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   54 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. SwissProt
Match: H2B3_SOLLC (Histone H2B.3 (Fragment) OS=Solanum lycopersicum GN=H2B-3 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 9.963e-43
Identity = 88/92 (95.65%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            +VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA E+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   46 AVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 137

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. SwissProt
Match: H2B1_ARATH (Histone H2B.1 OS=Arabidopsis thaliana GN=At1g07790 PE=1 SV=3)

HSP 1 Score: 172.94 bits (437), Expect = 9.963e-43
Identity = 88/92 (95.65%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            +VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   57 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. SwissProt
Match: H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 172.94 bits (437), Expect = 9.963e-43
Identity = 88/92 (95.65%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA E+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   59 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. TrEMBL
Match: Q2XPW1_SOLTU (Histone H2B OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.801e-42
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   55 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 146

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. TrEMBL
Match: D7SKK3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025021001 PE=4 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.801e-42
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   26 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 117

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. TrEMBL
Match: C6T1C4_SOYBN (Histone H2B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.801e-42
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   47 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 138

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. TrEMBL
Match: C6SWY5_SOYBN (Histone H2B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.801e-42
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   57 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. TrEMBL
Match: C6SWE9_SOYBN (Histone H2B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.801e-42
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   46 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 137

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. TrEMBL
Match: B9T761_RICCO (Histone H2B OS=Ricinus communis GN=RCOM_0272700 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.801e-42
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   44 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 135

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. TrEMBL
Match: B9T302_RICCO (Histone H2B OS=Ricinus communis GN=RCOM_0350190 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.801e-42
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   50 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 141

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. TrEMBL
Match: B9T301_RICCO (Histone H2B OS=Ricinus communis GN=RCOM_0350180 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.801e-42
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   50 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 141

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. TrEMBL
Match: B9HUW2_POPTR (Histone H2B (Fragment) OS=Populus trichocarpa GN=HTB902 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.801e-42
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:    2 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 93

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. TrEMBL
Match: B3SGL7_MEDTR (Histone H2B OS=Medicago truncatula PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.801e-42
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   46 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 137

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. TAIR peptide
Match: AT3G45980.1 (| Symbols: H2B, HTB9 | Histone superfamily protein | chr3:16897492-16897944 REVERSE LENGTH=150)

HSP 1 Score: 174.866 bits (442), Expect = 2.774e-44
Identity = 89/92 (96.74%), Postives = 92/92 (100.00%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA+ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   59 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. TAIR peptide
Match: AT3G46030.1 (| Symbols: HTB11 | Histone superfamily protein | chr3:16913614-16914051 REVERSE LENGTH=145)

HSP 1 Score: 174.866 bits (442), Expect = 2.774e-44
Identity = 89/92 (96.74%), Postives = 92/92 (100.00%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA+ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   54 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. TAIR peptide
Match: AT5G22880.1 (| Symbols: H2B, HTB2 | histone B2 | chr5:7652130-7652567 REVERSE LENGTH=145)

HSP 1 Score: 173.326 bits (438), Expect = 8.071e-44
Identity = 88/92 (95.65%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            +VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   54 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. TAIR peptide
Match: AT5G59910.1 (| Symbols: HTB4 | Histone superfamily protein | chr5:24127206-24127658 FORWARD LENGTH=150)

HSP 1 Score: 172.94 bits (437), Expect = 1.054e-43
Identity = 88/92 (95.65%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA E+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   59 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. TAIR peptide
Match: AT1G07790.1 (| Symbols: HTB1 | Histone superfamily protein | chr1:2413049-2413495 FORWARD LENGTH=148)

HSP 1 Score: 172.94 bits (437), Expect = 1.054e-43
Identity = 88/92 (95.65%), Postives = 91/92 (98.91%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            +VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   57 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. TAIR peptide
Match: AT5G02570.1 (| Symbols: | Histone superfamily protein | chr5:576742-577140 REVERSE LENGTH=132)

HSP 1 Score: 172.17 bits (435), Expect = 1.798e-43
Identity = 88/92 (95.65%), Postives = 89/92 (96.74%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            S ETYKIYIFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   41 STETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 132

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. TAIR peptide
Match: AT2G37470.1 (| Symbols: | Histone superfamily protein | chr2:15736832-15737248 FORWARD LENGTH=138)

HSP 1 Score: 171.785 bits (434), Expect = 2.348e-43
Identity = 87/91 (95.60%), Postives = 89/91 (97.80%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 454
            SVETYKIYIFKVLKQVHPD+GIS KAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
Sbjct:   48 SVETYKIYIFKVLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 138

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. TAIR peptide
Match: AT2G28720.1 (| Symbols: | Histone superfamily protein | chr2:12327043-12327498 FORWARD LENGTH=151)

HSP 1 Score: 171.4 bits (433), Expect = 3.067e-43
Identity = 87/92 (94.57%), Postives = 90/92 (97.83%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            S ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA E+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   60 STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. TAIR peptide
Match: AT3G53650.1 (| Symbols: | Histone superfamily protein | chr3:19889358-19889774 FORWARD LENGTH=138)

HSP 1 Score: 171.014 bits (432), Expect = 4.005e-43
Identity = 86/92 (93.48%), Postives = 90/92 (97.83%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            ++ETYKIYIFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLA ESSRLARYNKKPTITSREIQTAVRLVLPGEL+KHAVSEGTKAVTKFTS+
Sbjct:   47 NIETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELSKHAVSEGTKAVTKFTSS 138

[Close]

BLAST of Pisum_sativum_v1_Contig2060 vs. TAIR peptide
Match: AT3G09480.1 (| Symbols: | Histone superfamily protein | chr3:2914890-2915270 REVERSE LENGTH=126)

HSP 1 Score: 168.703 bits (426), Expect = 1.988e-42
Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 2

Query:  182 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAAESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 457
            S ETYKIY+FKVLKQVHPDIGIS KAMGIMNSFIND FEK+A ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   35 STETYKIYLFKVLKQVHPDIGISGKAMGIMNSFINDTFEKIALESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 126

The following BLAST results are available for this feature:

BLAST of Pisum_sativum_v1_Contig2060 vs. SwissProt
BLAST of Pisum_sativum_v1_Contig2060 vs. TrEMBL
BLAST of Pisum_sativum_v1_Contig2060 vs. TAIR peptide

BLAST of Pisum_sativum_v1_Contig2060 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
H2B1_MEDTR	2.007e-43	97.83	Probable histone H2B.1 OS=Medicago truncatula PE=3...	[more]
H2B7_ARATH	2.622e-43	96.74	Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030...	[more]
H2B6_ARATH	2.622e-43	96.74	Histone H2B.6 OS=Arabidopsis thaliana GN=H2B PE=1 ...	[more]
H2B3_MEDTR	2.622e-43	96.74	Probable histone H2B.3 OS=Medicago truncatula PE=3...	[more]
H2B_GOSHI	4.472e-43	96.74	Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV...	[more]
H2B_CAPAN	5.841e-43	95.65	Histone H2B OS=Capsicum annuum GN=HIS2B PE=2 SV=3	[more]
H2B10_ARATH	7.628e-43	95.65	Histone H2B.10 OS=Arabidopsis thaliana GN=At5g2288...	[more]
H2B3_SOLLC	9.963e-43	95.65	Histone H2B.3 (Fragment) OS=Solanum lycopersicum G...	[more]
H2B1_ARATH	9.963e-43	95.65	Histone H2B.1 OS=Arabidopsis thaliana GN=At1g07790...	[more]
H2B11_ARATH	9.963e-43	95.65	Histone H2B.11 OS=Arabidopsis thaliana GN=At5g5991...	[more]

BLAST of Pisum_sativum_v1_Contig2060 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q2XPW1_SOLTU	2.801e-42	97.83	Histone H2B OS=Solanum tuberosum PE=2 SV=1	[more]
D7SKK3_VITVI	2.801e-42	97.83	Whole genome shotgun sequence of line PN40024, sca...	[more]
C6T1C4_SOYBN	2.801e-42	97.83	Histone H2B OS=Glycine max PE=2 SV=1	[more]
C6SWY5_SOYBN	2.801e-42	97.83	Histone H2B OS=Glycine max PE=2 SV=1	[more]
C6SWE9_SOYBN	2.801e-42	97.83	Histone H2B OS=Glycine max PE=2 SV=1	[more]
B9T761_RICCO	2.801e-42	97.83	Histone H2B OS=Ricinus communis GN=RCOM_0272700 PE...	[more]
B9T302_RICCO	2.801e-42	97.83	Histone H2B OS=Ricinus communis GN=RCOM_0350190 PE...	[more]
B9T301_RICCO	2.801e-42	97.83	Histone H2B OS=Ricinus communis GN=RCOM_0350180 PE...	[more]
B9HUW2_POPTR	2.801e-42	97.83	Histone H2B (Fragment) OS=Populus trichocarpa GN=H...	[more]
B3SGL7_MEDTR	2.801e-42	97.83	Histone H2B OS=Medicago truncatula PE=3 SV=1	[more]

BLAST of Pisum_sativum_v1_Contig2060 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT3G45980.1	2.774e-44	96.74	\| Symbols: H2B, HTB9 \| Histone superfamily protein...	[more]
AT3G46030.1	2.774e-44	96.74	\| Symbols: HTB11 \| Histone superfamily protein \| c...	[more]
AT5G22880.1	8.071e-44	95.65	\| Symbols: H2B, HTB2 \| histone B2 \| chr5:7652130-7...	[more]
AT5G59910.1	1.054e-43	95.65	\| Symbols: HTB4 \| Histone superfamily protein \| ch...	[more]
AT1G07790.1	1.054e-43	95.65	\| Symbols: HTB1 \| Histone superfamily protein \| ch...	[more]
AT5G02570.1	1.798e-43	95.65	\| Symbols: \| Histone superfamily protein \| chr5:5...	[more]
AT2G37470.1	2.348e-43	95.60	\| Symbols: \| Histone superfamily protein \| chr2:1...	[more]
AT2G28720.1	3.067e-43	94.57	\| Symbols: \| Histone superfamily protein \| chr2:1...	[more]
AT3G53650.1	4.005e-43	93.48	\| Symbols: \| Histone superfamily protein \| chr3:1...	[more]
AT3G09480.1	1.988e-42	92.39	\| Symbols: \| Histone superfamily protein \| chr3:2...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 65..83 score: 1.8e-49coord: 84..104 score: 1.8e-49coord: 106..123 score: 1.8e-49coord: 123..136 score: 1.8e-49coord: 136..149 score: 1.8
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 6..152 score: 2.6e
IPR000558	Histone H2B	SMART	SM00427	no description	coord: 55..151 score: 6.5
IPR000558	Histone H2B	PROSITE	PS00357	HISTONE_H2B	coord: 120..142 score
IPR007125	Histone core	PFAM	PF00125	Histone	coord: 61..128 score: 8.7
IPR009072	Histone-fold	GENE3D	1.10.20.10	no description	coord: 31..151 score: 3.2
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 32..151 score: 1.2
None	No IPR available	SEG	seg	seg	coord: 7..23 score: NAcoord: 27..60 score
None	No IPR available	SEG	seg	seg	coord: 1..16 score: NAcoord: 21..40 score: NAcoord: 43..66 score
None	No IPR available	SEG	seg	seg	coord: 7..41 score: NAcoord: 45..61 score
None	No IPR available	SEG	seg	seg	coord: 17..75 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Pisum_sativum_v1_Contig2060 ID=Pisum_sativum_v1_Contig2060; Name=Pisum_sativum_v1_Contig2060; organism=Pisum sativum; type=contig; length=580bp
CGGCCGCCCGGGCAGGTCGCCAAAGGGAGAGAAGAAGCCTGCTGAGAAGA
AACCCGTCGAAGAGAAGAAGTCTACGGTGGCCGAGAAGGCTCCTGCCGAG
AAGAAACCCAAGGCAGGAAAGAAGCTTCCCAAGGAAGCCGGTGCCGCCGC
CGGAGACAAGAAGAAGAAGAGAAATAAGAAGAGTGTGGAGACATACAAGA
TCTACATCTTCAAAGTTCTGAAGCAGGTTCACCCTGACATCGGTATCTCA
AGCAAGGCCATGGGAATCATGAACAGCTTCATCAACGACATCTTCGAGAA
GCTTGCTGCTGAATCTTCCAGACTTGCAAGGTACAACAAGAAGCCGACAA
TAACATCTAGGGAAATTCAGACGGCAGTCAGGCTTGTTCTGCCTGGGGAA
TTGGCTAAGCATGCTGTTTCAGAGGGAACCAAAGCTGTGACTAAGTTTAC
AAGTGCTTGAATTATGTATAATTTGCTTTGTACTTTGTAATGGTTATTCT
AAGATTATTTCTGTTAGTGTTAGGTCTGAATTAGTGTGAAACTTTCTTTT
AAATCAAATGAATCCTTCTGTGTATGAATG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Cellular Component**
Term	Definition
GO:0000786	nucleosome
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006334	nucleosome assembly

Vocabulary: **INTERPRO**
Term	Definition
IPR000558	Histone_H2B
IPR007125	Histone_H2A/H2B/H3
IPR009072	Histone-fold

Search form

Pisum_sativum_v1_Contig2060