Pisum_sativum_v1_Contig2073

Contig Overview


Name	Pisum_sativum_v1_Contig2073
Unique Name	Pisum_sativum_v1_Contig2073
Type	contig
Organism	Pisum sativum (pea)
Sequence length	629

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
GH720660	EST	GH720660:1..350 -
AM162174	EST	AM162174:21..327 +
EX570558	EST	EX570558:146..529 +
EX570557	EST	EX570557:146..529 +
EX570559	EST	EX570559:120..582 +
FG528731	EST	FG528731:124..630 +

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
KEGG analysis for Pisum sativum unigene v1	2011-01-05
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GH720660	GH720660	Pisum sativum	EST
AM162174	AM162174	Pisum sativum	EST
EX570558	EX570558	Pisum sativum	EST
EX570557	EX570557	Pisum sativum	EST
EX570559	EX570559	Pisum sativum	EST
FG528731	FG528731	Pisum sativum	EST

Homology

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. SwissProt
Match: RL30_LUPLU (60S ribosomal protein L30 OS=Lupinus luteus GN=RPL30 PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.074e-59
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGDQ 416
            MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIK++PGDQ
Sbjct:    1 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKTLPGDQ 112

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. SwissProt
Match: RL30_EUPES (60S ribosomal protein L30 OS=Euphorbia esula GN=RPL30 PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 7.087e-56
Identity = 104/111 (93.69%), Postives = 110/111 (99.10%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGD 413
            MVAAKKTKKTHESIN+RLALVMKSGK+TLGYKTVL+SLRS+KGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKY+RVCCLSI+D GDSDIIKSIPGD
Sbjct:    1 MVAAKKTKKTHESINSRLALVMKSGKFTLGYKTVLESLRSNKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDAGDSDIIKSIPGD 111

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. SwissProt
Match: RL301_ARATH (Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana GN=RPL30A PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.478e-53
Identity = 100/112 (89.29%), Postives = 109/112 (97.32%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGDQ 416
            MVAAKKTKK+HE IN+RLALVMKSGKYTLGYK+VLKSLRSSKGKLI+I++NCPPLR+SEIEYYAMLAKVGVHHYN NNVDLGTACGKY+RV CLSIVDPGDSDIIKS+PGDQ
Sbjct:    1 MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGDQ 112

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. SwissProt
Match: RL302_ARATH (60S ribosomal protein L30-2 OS=Arabidopsis thaliana GN=RPL30B PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 4.300e-53
Identity = 99/112 (88.39%), Postives = 106/112 (94.64%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGDQ 416
            MV  KKTKK+HE IN+RLALVMKSGKYTLGYK+VLKSLR SKGKLI+I+ NCPPLR+SEIEYYAMLAKVGVHHYNGNNVDLGTACGKY+RV CLSIVDPGDSDIIKSIPGDQ
Sbjct:    1 MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGDQ 112

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. SwissProt
Match: RL303_ARATH (60S ribosomal protein L30-3 OS=Arabidopsis thaliana GN=RPL30C PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 4.754e-52
Identity = 97/112 (86.61%), Postives = 107/112 (95.54%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGDQ 416
            MVA KK KK+HE IN+RLALVMKSGKYTLGYK+VLKSLRSSKGKLI+I++NCPPLR+SEIEYYAMLAKVGVH YNGNNVDLGTACGKY+RV CLSIVDPGDSDIIK++PGDQ
Sbjct:    1 MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGDQ 112

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. SwissProt
Match: RL30_MAIZE (60S ribosomal protein L30 OS=Zea mays GN=RPL30 PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.609e-50
Identity = 92/112 (82.14%), Postives = 106/112 (94.64%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGDQ 416
            MVA KKTKK+ ++INN+L LVMKSGKYTLGYKTVL++LR+SK KL+IIANNCPPLRKSEIEYYAMLAKV VHH++GNNVDLGTACGKY+RVCCLSI+DPGDSDIIK+ PG+Q
Sbjct:    1 MVATKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKSKLVIIANNCPPLRKSEIEYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTTPGEQ 112

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. SwissProt
Match: RL30_ORYSJ (60S ribosomal protein L30 OS=Oryza sativa subsp. japonica GN=RPL30 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.189e-48
Identity = 89/107 (83.18%), Postives = 103/107 (96.26%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKS 401
            MVAAKKTKK+ ++INN+L LVMKSGKYTLGYKTVL++LR+SK KL+II+NNCPPLRKSEIEYYAMLAKV VHH++GNNVDLGTACGKY+RVCCLSI+DPGDSDIIK+
Sbjct:    1 MVAAKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEIEYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKT 107

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. SwissProt
Match: RL30_WHEAT (60S ribosomal protein L30 OS=Triticum aestivum PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 5.091e-46
Identity = 87/107 (81.31%), Postives = 97/107 (90.65%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKS 401
            M   KK KK+ E+INN+L LVMKSGKYTLGYKTVLK+LRSS GKLII+ANNCPPLRKSEIE YAMLAK+ VHH++GNNVDLGTACGKYYRVCCLSI+DPGDSDII +
Sbjct:    1 MAPTKKAKKSGENINNKLQLVMKSGKYTLGYKTVLKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVDLGTACGKYYRVCCLSILDPGDSDIIST 107

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. SwissProt
Match: RL30_RAT (60S ribosomal protein L30 OS=Rattus norvegicus GN=Rpl30 PE=3 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.481e-45
Identity = 85/109 (77.98%), Postives = 97/109 (88.99%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIP 407
            MVAAKKTKK+ ESIN+RL LVMKSGKY LGYK  LK +R  K KL+I+ANNCP LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKYYRVC L+I+DPGDSDII+S+P
Sbjct:    1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. SwissProt
Match: RL30_OPHHA (60S ribosomal protein L30 OS=Ophiophagus hannah GN=RPL30 PE=3 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.481e-45
Identity = 85/109 (77.98%), Postives = 97/109 (88.99%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIP 407
            MVAAKKTKK+ ESIN+RL LVMKSGKY LGYK  LK +R  K KL+I+ANNCP LRKSEIEYYAMLAK GVHHY+GNN++LGTACGKYYRVC L+I+DPGDSDII+S+P
Sbjct:    1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMP 109

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. TrEMBL
Match: A7X6P5_PEA (Ribosomal protein L30e OS=Pisum sativum PE=4 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.156e-58
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGDQ 416
            MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGDQ
Sbjct:    1 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGDQ 112

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. TrEMBL
Match: B7FKJ3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.847e-57
Identity = 108/112 (96.43%), Postives = 112/112 (100.00%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGDQ 416
            MVAAKKTKKTHESINNRLALV+KSGKYTLGYKTVLKSLR++KGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIK+IPGDQ
Sbjct:    1 MVAAKKTKKTHESINNRLALVLKSGKYTLGYKTVLKSLRNNKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKTIPGDQ 112

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. TrEMBL
Match: A9PBT5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_648993 PE=4 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.082e-56
Identity = 106/111 (95.50%), Postives = 111/111 (100.00%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGD 413
            MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLR+SKGKLIII+NNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKY+RVCCLSI+DPGDSDIIKS+PGD
Sbjct:    1 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRNSKGKLIIISNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKSVPGD 111

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. TrEMBL
Match: C6T7Z6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.413e-56
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGDQ 416
            MVAAKKTKKTHESINNRLALVMKSGK TLGYKTVLKSLR+SKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSI+DPGDSDIIK++PGDQ
Sbjct:    1 MVAAKKTKKTHESINNRLALVMKSGKSTLGYKTVLKSLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKTLPGDQ 112

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. TrEMBL
Match: B9RUQ4_RICCO (60S ribosomal protein L30, putative OS=Ricinus communis GN=RCOM_0855600 PE=4 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.413e-56
Identity = 106/111 (95.50%), Postives = 110/111 (99.10%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGD 413
            MV AKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKL+IIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSI+DPGDSDIIKS+PG+
Sbjct:    1 MVVAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLVIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKSMPGE 111

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. TrEMBL
Match: C6TCF6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.410e-56
Identity = 106/112 (94.64%), Postives = 111/112 (99.11%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGDQ 416
            MVAAKKTKKTHESINNRLALVMKSGK+TLGYKTVLKSL +SKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSI+DPGDSDIIK++PGDQ
Sbjct:    1 MVAAKKTKKTHESINNRLALVMKSGKFTLGYKTVLKSLGNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKTLPGDQ 112

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. TrEMBL
Match: A9PD08_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 5.368e-56
Identity = 105/111 (94.59%), Postives = 110/111 (99.10%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGD 413
            MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLR+SKGKLIII+NNCPP RKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKY+RVCCLSI+DPGDSDIIKS+PGD
Sbjct:    1 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRNSKGKLIIISNNCPPQRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKSVPGD 111

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. TrEMBL
Match: D1MI90_WOLAR (60S ribosomal protein L30 OS=Wolffia arrhiza PE=4 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 5.936e-55
Identity = 102/112 (91.07%), Postives = 110/112 (98.21%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGDQ 416
            MV+ KKTKKTHESINNRLALVMKSGKYTLGYKTVL++LRSSK KL+IIANNCPPLRKSEIEYYAMLAKVGVHH+NGNNVDLGTACGKYYRVCCLSI+DPGDSDIIKS+PG+Q
Sbjct:    1 MVSTKKTKKTHESINNRLALVMKSGKYTLGYKTVLRTLRSSKAKLVIIANNCPPLRKSEIEYYAMLAKVGVHHFNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKSMPGEQ 112

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. TrEMBL
Match: D7SW25_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_31.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022191001 PE=4 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.946e-54
Identity = 102/111 (91.89%), Postives = 109/111 (98.20%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGD 413
            MVA KKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLI+I+NNCPPLRKSEIEYYAMLAKVGVHH+NGNNVDLGTACGKY+RV CLSI+DPGDSDIIK++PGD
Sbjct:    1 MVAGKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLILISNNCPPLRKSEIEYYAMLAKVGVHHFNGNNVDLGTACGKYFRVSCLSIIDPGDSDIIKTLPGD 111

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. TrEMBL
Match: B9SSM2_RICCO (60S ribosomal protein L30, putative OS=Ricinus communis GN=RCOM_0985630 PE=4 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.562e-54
Identity = 102/111 (91.89%), Postives = 108/111 (97.30%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGD 413
            M A KKTKKTHESINNRLALVMKSGKYTLGYKTVL+SLR+SKGKLIII+NNCPPLRKSEIEYYAML+KVGVHHYNGNNVDLGTACGKY+RV CLSIVDPGDSDIIKS+PGD
Sbjct:    1 MAAGKKTKKTHESINNRLALVMKSGKYTLGYKTVLRSLRTSKGKLIIISNNCPPLRKSEIEYYAMLSKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGD 111

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. TAIR peptide
Match: AT1G36240.1 (| Symbols: | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | chr1:13614890-13616233 FORWARD LENGTH=112)

HSP 1 Score: 209.149 bits (531), Expect = 1.526e-54
Identity = 100/112 (89.29%), Postives = 109/112 (97.32%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGDQ 416
            MVAAKKTKK+HE IN+RLALVMKSGKYTLGYK+VLKSLRSSKGKLI+I++NCPPLR+SEIEYYAMLAKVGVHHYN NNVDLGTACGKY+RV CLSIVDPGDSDIIKS+PGDQ
Sbjct:    1 MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGDQ 112

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. TAIR peptide
Match: AT1G77940.1 (| Symbols: | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | chr1:29304116-29305288 REVERSE LENGTH=112)

HSP 1 Score: 207.608 bits (527), Expect = 4.439e-54
Identity = 99/112 (88.39%), Postives = 106/112 (94.64%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGDQ 416
            MV  KKTKK+HE IN+RLALVMKSGKYTLGYK+VLKSLR SKGKLI+I+ NCPPLR+SEIEYYAMLAKVGVHHYNGNNVDLGTACGKY+RV CLSIVDPGDSDIIKSIPGDQ
Sbjct:    1 MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGDQ 112

[Close]

BLAST of Pisum_sativum_v1_Contig2073 vs. TAIR peptide
Match: AT3G18740.1 (| Symbols: | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | chr3:6453437-6453870 FORWARD LENGTH=112)

HSP 1 Score: 204.142 bits (518), Expect = 4.907e-53
Identity = 97/112 (86.61%), Postives = 107/112 (95.54%), Query Frame = 3

Query:   81 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGDQ 416
            MVA KK KK+HE IN+RLALVMKSGKYTLGYK+VLKSLRSSKGKLI+I++NCPPLR+SEIEYYAMLAKVGVH YNGNNVDLGTACGKY+RV CLSIVDPGDSDIIK++PGDQ
Sbjct:    1 MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGDQ 112

The following BLAST results are available for this feature:

BLAST of Pisum_sativum_v1_Contig2073 vs. SwissProt
BLAST of Pisum_sativum_v1_Contig2073 vs. TrEMBL
BLAST of Pisum_sativum_v1_Contig2073 vs. TAIR peptide

BLAST of Pisum_sativum_v1_Contig2073 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL30_LUPLU	3.074e-59	98.21	60S ribosomal protein L30 OS=Lupinus luteus GN=RPL...	[more]
RL30_EUPES	7.087e-56	93.69	60S ribosomal protein L30 OS=Euphorbia esula GN=RP...	[more]
RL301_ARATH	1.478e-53	89.29	Putative 60S ribosomal protein L30-1 OS=Arabidopsi...	[more]
RL302_ARATH	4.300e-53	88.39	60S ribosomal protein L30-2 OS=Arabidopsis thalian...	[more]
RL303_ARATH	4.754e-52	86.61	60S ribosomal protein L30-3 OS=Arabidopsis thalian...	[more]
RL30_MAIZE	2.609e-50	82.14	60S ribosomal protein L30 OS=Zea mays GN=RPL30 PE=...	[more]
RL30_ORYSJ	3.189e-48	83.18	60S ribosomal protein L30 OS=Oryza sativa subsp. j...	[more]
RL30_WHEAT	5.091e-46	81.31	60S ribosomal protein L30 OS=Triticum aestivum PE=...	[more]
RL30_RAT	1.481e-45	77.98	60S ribosomal protein L30 OS=Rattus norvegicus GN=...	[more]
RL30_OPHHA	1.481e-45	77.98	60S ribosomal protein L30 OS=Ophiophagus hannah GN...	[more]

BLAST of Pisum_sativum_v1_Contig2073 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A7X6P5_PEA	1.156e-58	100.00	Ribosomal protein L30e OS=Pisum sativum PE=4 SV=1	[more]
B7FKJ3_MEDTR	2.847e-57	96.43	Putative uncharacterized protein OS=Medicago trunc...	[more]
A9PBT5_POPTR	1.082e-56	95.50	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
C6T7Z6_SOYBN	1.413e-56	95.54	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9RUQ4_RICCO	1.413e-56	95.50	60S ribosomal protein L30, putative OS=Ricinus com...	[more]
C6TCF6_SOYBN	2.410e-56	94.64	Putative uncharacterized protein OS=Glycine max PE...	[more]
A9PD08_POPTR	5.368e-56	94.59	Putative uncharacterized protein OS=Populus tricho...	[more]
D1MI90_WOLAR	5.936e-55	91.07	60S ribosomal protein L30 OS=Wolffia arrhiza PE=4 ...	[more]
D7SW25_VITVI	2.946e-54	91.89	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9SSM2_RICCO	6.562e-54	91.89	60S ribosomal protein L30, putative OS=Ricinus com...	[more]

BLAST of Pisum_sativum_v1_Contig2073 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G36240.1	1.526e-54	89.29	\| Symbols: \| Ribosomal protein L7Ae/L30e/S12e/Gad...	[more]
AT1G77940.1	4.439e-54	88.39	\| Symbols: \| Ribosomal protein L7Ae/L30e/S12e/Gad...	[more]
AT3G18740.1	4.907e-53	86.61	\| Symbols: \| Ribosomal protein L7Ae/L30e/S12e/Gad...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000231	Ribosomal protein L30e	HAMAP	MF_00481	Ribosomal_L30e	coord: 25..122 score: 21
IPR000231	Ribosomal protein L30e	PANTHER	PTHR11449	RIBOSOMAL PROTEIN L30	coord: 44..125 score: 3.3
IPR004038	Ribosomal protein L7Ae/L30e/S12e/Gadd45	PFAM	PF01248	Ribosomal_L7Ae	coord: 26..118 score: 1.5
IPR022991	Ribosomal protein L30e, conserved site	PROSITE	PS00709	RIBOSOMAL_L30E_1	coord: 37..61 score
IPR022991	Ribosomal protein L30e, conserved site	PROSITE	PS00993	RIBOSOMAL_L30E_2	coord: 93..113 score
None	No IPR available	GENE3D	3.30.1330.30	no description	coord: 25..122 score: 3
None	No IPR available	PANTHER	PTHR11449:SF1	60S RIBOSOMAL PROTEIN L30	coord: 44..125 score: 3.3
None	No IPR available	SUPERFAMILY	55315	L30e-like	coord: 23..121 score: 2.2

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Pisum_sativum_v1_Contig2073 ID=Pisum_sativum_v1_Contig2073; Name=Pisum_sativum_v1_Contig2073; organism=Pisum sativum; type=contig; length=629bp
GCGTGGTCGCGGCCGAGGTGCATCCATTTTCATTTCTGTAGCCGCAATTT
CTCTGCAAATCGCCACCAAATCCATCAACAATGGTTGCGGCAAAGAAGAC
CAAGAAGACTCATGAGAGTATCAACAACAGGCTCGCTCTTGTCATGAAGA
GTGGCAAATATACCCTAGGTTACAAAACCGTTCTCAAGTCCCTAAGGAGT
TCAAAAGGGAAGTTGATTATCATTGCTAACAACTGTCCTCCTTTGAGGAA
ATCTGAAATTGAATACTATGCTATGTTGGCTAAAGTTGGAGTTCATCATT
ACAATGGAAACAATGTTGACTTGGGTACCGCATGTGGAAAGTACTACAGA
GTGTGCTGCCTCAGCATCGTTGATCCTGGTGATTCTGACATCATTAAGTC
AATTCCCGGTGACCAGTAAAAGTAGTTAAGATATTTGAATGGTGTTTTCT
ATTCTCAGTTTTCTAGACATTGTTAAGAGTTTCTAGTTGTAAACTTTGTA
CAATGCTCGGATTTCTGATATCCAGATGATTGAGCATTGAGTAATTTTGT
CTATGCAATTTTTGTTTCATTGTGCCGATTTCTATATAGATAATATTTCC
AGTTTGATATTTAATTTCTGAGTTATCTC

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR000231	Ribosomal_eL30
IPR004038	Ribosomal_eL8/eL30/eS12/Gad45
IPR022991	Ribosomal_L30e_CS

Search form

Pisum_sativum_v1_Contig2073