Pisum_sativum_v1_Contig2114

Contig Overview
NamePisum_sativum_v1_Contig2114
Unique NamePisum_sativum_v1_Contig2114
Typecontig
OrganismPisum sativum (pea)
Sequence length493
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GH719855ESTGH719855:1..338 +Pisum sativum unigene v1n/a
FG528692ESTFG528692:71..447 -Pisum sativum unigene v1n/a
CD860225ESTCD860225:113..493 +Pisum sativum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GH719855GH719855Pisum sativumEST
FG528692FG528692Pisum sativumEST
CD860225CD860225Pisum sativumEST


Homology
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. SwissProt
Match: RL27_PEA (60S ribosomal protein L27 OS=Pisum sativum GN=RPL27 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.083e-32
Identity = 68/69 (98.55%), Postives = 68/69 (98.55%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            RVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKK LEERFKTGKNRWFFTKLRF
Sbjct:   67 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKSLEERFKTGKNRWFFTKLRF 135
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. SwissProt
Match: RL272_ARATH (60S ribosomal protein L27-2 OS=Arabidopsis thaliana GN=RPL27B PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 3.051e-27
Identity = 57/69 (82.61%), Postives = 61/69 (88.41%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            RVK F+KLVNYQHLMPTRYTLDVDLK+    D L+SKDKKVTALKE K +LEERFKTGKNRWFFTKLRF
Sbjct:   67 RVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEERFKTGKNRWFFTKLRF 135
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. SwissProt
Match: RL273_ARATH (60S ribosomal protein L27-3 OS=Arabidopsis thaliana GN=RPL27C PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 3.985e-27
Identity = 57/69 (82.61%), Postives = 60/69 (86.96%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            RVK F+KLVNYQHLMPTRYTLDVDLK+    D LQSKDKKV ALKE K +LEERFKTGKNRWFFTKLRF
Sbjct:   67 RVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEERFKTGKNRWFFTKLRF 135
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. SwissProt
Match: RL271_ARATH (60S ribosomal protein L27-1 OS=Arabidopsis thaliana GN=RPL27A PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 3.730e-25
Identity = 52/69 (75.36%), Postives = 59/69 (85.51%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            RVK F K++NYQH+MPTRYTLD+DLK+ V  D + SKDKKVTALKE K + EERFKTGKNRWFFTKLRF
Sbjct:   67 RVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEERFKTGKNRWFFTKLRF 135
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. SwissProt
Match: RL27_SOLTU (60S ribosomal protein L27 OS=Solanum tuberosum GN=RPL27 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 4.559e-23
Identity = 55/73 (75.34%), Postives = 60/73 (82.19%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVV----PDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            RVKAF+KLVNY H+MPTRYTLD DLKD V      DVLQ++DKKVTA + TK RL ERFKTGKNRWFFTKLRF
Sbjct:   67 RVKAFIKLVNYNHIMPTRYTLDEDLKDVVKDVVNADVLQARDKKVTA-RRTKARLAERFKTGKNRWFFTKLRF 138
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. SwissProt
Match: RL27_PYRST (60S ribosomal protein L27 OS=Pyrobotrys stellata GN=RPL27 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.058e-19
Identity = 46/68 (67.65%), Postives = 52/68 (76.47%), Query Frame = -3 
Query:  237 VKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 440
            +K F+K VNY HLMPTRYTLDVD K  V  +  ++  KKV A KE KK LEE+FKTGKNRWFFTKLRF
Sbjct:   68 LKTFIKTVNYNHLMPTRYTLDVDFK-GVAAEAQENPTKKVEARKECKKLLEEKFKTGKNRWFFTKLRF 134
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. SwissProt
Match: RL27_HIPCM (60S ribosomal protein L27 OS=Hippocampus comes GN=rpl27 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.571e-15
Identity = 39/70 (55.71%), Postives = 50/70 (71.43%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVV-PDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            ++KAFVK+ NY HLMPTRY++D+ L   VV  DV +    K  A +E K + EER+KTGKN+WFF KLRF
Sbjct:   67 KIKAFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKSKARREAKVKFEERYKTGKNKWFFQKLRF 136
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. SwissProt
Match: RL27_DANRE (60S ribosomal protein L27 OS=Danio rerio GN=rpl27 PE=2 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 2.051e-15
Identity = 39/70 (55.71%), Postives = 50/70 (71.43%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVV-PDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            ++KAFVK+ NY HLMPTRY++D+ L   VV  DV +    K  A +E K + EER+KTGKN+WFF KLRF
Sbjct:   67 KIKAFVKVFNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. SwissProt
Match: RL27_ICTPU (60S ribosomal protein L27 OS=Ictalurus punctatus GN=rpl27 PE=2 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 2.679e-15
Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVV-PDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            ++KAFVK+ NY HLMPTRY++D+ L   +V  DV +    K  A +E K + EER+KTGKN+WFF KLRF
Sbjct:   67 KIKAFVKVFNYNHLMPTRYSVDIPLDKTIVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. SwissProt
Match: RL27_RAT (60S ribosomal protein L27 OS=Rattus norvegicus GN=Rpl27 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 4.570e-15
Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVV-PDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            ++K+FVK+ NY HLMPTRY++D+ L   VV  DV +    K  A +E K + EER+KTGKN+WFF KLRF
Sbjct:   67 KIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. TrEMBL
Match: C6T3R4_SOYBN (60S ribosomal protein L27 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 9.292e-31
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            RVKAFVKLVNYQHLMPTRYTLDVDLKDAV PDVL +KDKKVTALKETKKRLEERFKTGKNRWFFTKLRF
Sbjct:   67 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVTPDVLATKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 135
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. TrEMBL
Match: C6TMU7_SOYBN (60S ribosomal protein L27 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.585e-30
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            RVKAFVKLVNYQHLMPTRYTLDVDLKDAV PDVL +KDKKVTALKETKKRLEERFKTGKNRWFFTKLRF
Sbjct:   67 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVNPDVLNAKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 135
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. TrEMBL
Match: B7FH51_MEDTR (60S ribosomal protein L27 OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 6.659e-29
Identity = 63/69 (91.30%), Postives = 64/69 (92.75%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            RVKAFVKLVNYQHLMPTRYTLDVDLK+ V  DVLQSKDKKVTALKE KKR EERFKTGKNRWFFTKLRF
Sbjct:   67 RVKAFVKLVNYQHLMPTRYTLDVDLKEVVTTDVLQSKDKKVTALKEAKKRFEERFKTGKNRWFFTKLRF 135
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. TrEMBL
Match: D7SWW9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_27.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00020410001 PE=4 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.937e-28
Identity = 60/69 (86.96%), Postives = 65/69 (94.20%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            RVKAF+KLVNY H+MPTRYTLDVDLKD V PDVLQS+DKKVTA KETKK+LEERFKTGKNRWFF+KLRF
Sbjct:   15 RVKAFIKLVNYNHIMPTRYTLDVDLKDVVSPDVLQSRDKKVTAAKETKKKLEERFKTGKNRWFFSKLRF 83
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. TrEMBL
Match: B7FN57_MEDTR (60S ribosomal protein L27 OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.937e-28
Identity = 62/69 (89.86%), Postives = 64/69 (92.75%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            RV+AFVKLVNYQHLMPTRYTLDVDLK+ V  DVLQSKDKKVTALKE KKR EERFKTGKNRWFFTKLRF
Sbjct:   67 RVEAFVKLVNYQHLMPTRYTLDVDLKEVVTTDVLQSKDKKVTALKEAKKRFEERFKTGKNRWFFTKLRF 135
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. TrEMBL
Match: A5C1Z2_VITVI (60S ribosomal protein L27 OS=Vitis vinifera GN=VITISV_032808 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 7.362e-28
Identity = 59/69 (85.51%), Postives = 65/69 (94.20%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            RVKAF+KLVNY H+MPTRYTLDV+LKD V PDVLQS+DKKVTA KETKK+LEERFKTGKNRWFF+KLRF
Sbjct:   67 RVKAFIKLVNYNHIMPTRYTLDVNLKDVVSPDVLQSRDKKVTAAKETKKKLEERFKTGKNRWFFSKLRF 135
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. TrEMBL
Match: B9HD67_POPTR (60S ribosomal protein L27 OS=Populus trichocarpa GN=POPTRDRAFT_560241 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.813e-26
Identity = 58/69 (84.06%), Postives = 60/69 (86.96%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            RVK FVK+VNYQHLMPTRYTLDVDLKD V PD L +KDKKV A KETK R EERFKTGKNRWFFTKLRF
Sbjct:   67 RVKCFVKVVNYQHLMPTRYTLDVDLKDLVTPDCLATKDKKVVACKETKTRFEERFKTGKNRWFFTKLRF 135
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. TrEMBL
Match: A9PBR8_POPTR (60S ribosomal protein L27 OS=Populus trichocarpa GN=POPTRDRAFT_824991 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.813e-26
Identity = 58/69 (84.06%), Postives = 61/69 (88.41%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            RVK F+KLVNYQHLMPTRYTLDVDLKDAV  D L +KDKKVTA K+TK R EERFKTGKNRWFFTKLRF
Sbjct:   67 RVKCFIKLVNYQHLMPTRYTLDVDLKDAVTADSLTTKDKKVTACKDTKARFEERFKTGKNRWFFTKLRF 135
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. TrEMBL
Match: A9PAT1_POPTR (60S ribosomal protein L27 OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.813e-26
Identity = 57/69 (82.61%), Postives = 60/69 (86.96%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            RVK F+KLVNYQHLMPTRYTLDVDLKD V  D L +KDKK+TA KETK R EERFKTGKNRWFFTKLRF
Sbjct:   67 RVKCFIKLVNYQHLMPTRYTLDVDLKDVVTADYLSTKDKKITACKETKARFEERFKTGKNRWFFTKLRF 135
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. TrEMBL
Match: A9P8D7_POPTR (60S ribosomal protein L27 OS=Populus trichocarpa GN=POPTRDRAFT_706822 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.813e-26
Identity = 57/69 (82.61%), Postives = 60/69 (86.96%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            RVK F+KLVNYQHLMPTRYTLDVDLKD V  D L +KDKK+TA KETK R EERFKTGKNRWFFTKLRF
Sbjct:   67 RVKCFIKLVNYQHLMPTRYTLDVDLKDVVTADCLSTKDKKITACKETKARFEERFKTGKNRWFFTKLRF 135
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. TAIR peptide
Match: AT3G22230.1 (| Symbols: | Ribosomal L27e protein family | chr3:7844136-7844543 REVERSE LENGTH=135)

HSP 1 Score: 120.939 bits (302), Expect = 3.417e-28
Identity = 57/69 (82.61%), Postives = 61/69 (88.41%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            RVK F+KLVNYQHLMPTRYTLDVDLK+    D L+SKDKKVTALKE K +LEERFKTGKNRWFFTKLRF
Sbjct:   67 RVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEERFKTGKNRWFFTKLRF 135
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. TAIR peptide
Match: AT4G15000.1 (| Symbols: | Ribosomal L27e protein family | chr4:8571896-8572303 FORWARD LENGTH=135)

HSP 1 Score: 120.553 bits (301), Expect = 4.463e-28
Identity = 57/69 (82.61%), Postives = 60/69 (86.96%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            RVK F+KLVNYQHLMPTRYTLDVDLK+    D LQSKDKKV ALKE K +LEERFKTGKNRWFFTKLRF
Sbjct:   67 RVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEERFKTGKNRWFFTKLRF 135
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. TAIR peptide
Match: AT2G32220.1 (| Symbols: | Ribosomal L27e protein family | chr2:13678945-13679352 FORWARD LENGTH=135)

HSP 1 Score: 114.005 bits (284), Expect = 4.177e-26
Identity = 52/69 (75.36%), Postives = 59/69 (85.51%), Query Frame = -3 
Query:  237 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 443
            RVK F K++NYQH+MPTRYTLD+DLK+ V  D + SKDKKVTALKE K + EERFKTGKNRWFFTKLRF
Sbjct:   67 RVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEERFKTGKNRWFFTKLRF 135
[Close]
BLAST of Pisum_sativum_v1_Contig2114 vs. TAIR peptide
Match: AT4G15000.2 (| Symbols: | Ribosomal L27e protein family | chr4:8571896-8572387 FORWARD LENGTH=131)

HSP 1 Score: 93.5893 bits (231), Expect = 5.842e-20
Identity = 45/57 (78.95%), Postives = 48/57 (84.21%), Query Frame = -3 
Query:  273 RVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKRLEERFKT 443
            RVK F+KLVNYQHLMPTRYTLDVDLK+    D LQSKDKKV ALKE K +LEERFKT
Sbjct:   67 RVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEERFKT 123
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig2114 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RL27_PEA1.083e-3298.5560S ribosomal protein L27 OS=Pisum sativum GN=RPL2... [more]
RL272_ARATH3.051e-2782.6160S ribosomal protein L27-2 OS=Arabidopsis thalian... [more]
RL273_ARATH3.985e-2782.6160S ribosomal protein L27-3 OS=Arabidopsis thalian... [more]
RL271_ARATH3.730e-2575.3660S ribosomal protein L27-1 OS=Arabidopsis thalian... [more]
RL27_SOLTU4.559e-2375.3460S ribosomal protein L27 OS=Solanum tuberosum GN=... [more]
RL27_PYRST3.058e-1967.6560S ribosomal protein L27 OS=Pyrobotrys stellata G... [more]
RL27_HIPCM1.571e-1555.7160S ribosomal protein L27 OS=Hippocampus comes GN=... [more]
RL27_DANRE2.051e-1555.7160S ribosomal protein L27 OS=Danio rerio GN=rpl27 ... [more]
RL27_ICTPU2.679e-1554.2960S ribosomal protein L27 OS=Ictalurus punctatus G... [more]
RL27_RAT4.570e-1554.2960S ribosomal protein L27 OS=Rattus norvegicus GN=... [more]
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BLAST of Pisum_sativum_v1_Contig2114 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6T3R4_SOYBN9.292e-3195.6560S ribosomal protein L27 OS=Glycine max PE=2 SV=1[more]
C6TMU7_SOYBN1.585e-3095.6560S ribosomal protein L27 OS=Glycine max PE=2 SV=1[more]
B7FH51_MEDTR6.659e-2991.3060S ribosomal protein L27 OS=Medicago truncatula P... [more]
D7SWW9_VITVI1.937e-2886.96Whole genome shotgun sequence of line PN40024, sca... [more]
B7FN57_MEDTR1.937e-2889.8660S ribosomal protein L27 OS=Medicago truncatula P... [more]
A5C1Z2_VITVI7.362e-2885.5160S ribosomal protein L27 OS=Vitis vinifera GN=VIT... [more]
B9HD67_POPTR1.813e-2684.0660S ribosomal protein L27 OS=Populus trichocarpa G... [more]
A9PBR8_POPTR1.813e-2684.0660S ribosomal protein L27 OS=Populus trichocarpa G... [more]
A9PAT1_POPTR1.813e-2682.6160S ribosomal protein L27 OS=Populus trichocarpa P... [more]
A9P8D7_POPTR1.813e-2682.6160S ribosomal protein L27 OS=Populus trichocarpa G... [more]
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BLAST of Pisum_sativum_v1_Contig2114 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT3G22230.13.417e-2882.61| Symbols: | Ribosomal L27e protein family | chr3... [more]
AT4G15000.14.463e-2882.61| Symbols: | Ribosomal L27e protein family | chr4... [more]
AT2G32220.14.177e-2675.36| Symbols: | Ribosomal L27e protein family | chr2... [more]
AT4G15000.25.842e-2078.95| Symbols: | Ribosomal L27e protein family | chr4... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 29..53
score
NoneNo IPR availableSEGsegsegcoord: 1..16
score
IPR001141Ribosomal protein L27ePANTHERPTHR1049760S RIBOSOMAL PROTEIN L27Ecoord: 1..85
score: 1.9
IPR001141Ribosomal protein L27ePFAMPF01777Ribosomal_L27ecoord: 2..85
score: 3.2
IPR018262Ribosomal protein L27e, conserved sitePROSITEPS01107RIBOSOMAL_L27Ecoord: 74..85
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig2114 ID=Pisum_sativum_v1_Contig2114; Name=Pisum_sativum_v1_Contig2114; organism=Pisum sativum; type=contig; length=493bp
AAATACAAAATCGTAATATTTCCTGCATTCCTTATCTTATTTTCTGAATT
AACCAAATTAACCACAATTTCAAAATGTAAATAACCAATCTAATCAAGCT
AATATATGAGATAGATCAAAGATGCATATAATAATACCTTCATAATAATC
AAAACTAAGCCACAAGTTCTTCCATAATTCATTCATAATAATCAAAAGCC
AAAATGTATAACTAGAAACAGAACAGTGAAAATTCAAAACCTAAGCTTGG
TGAAAAACCACCTGTTCTTCCCTGTTTTGAACCTCTCTTCAAGCCTCTTC
TTAGTTTCTTTCAGTGCAGTCACCTTCTTGTCCTTTGATTGAAGAACATC
AGGAACAACAGCATCCTTCAGATCCACATCCAGAGTGTAACGAGTAGGCA
TCAGATGCTGATAATTCACCAGCTTCACGAATGCCTTAACCCTAGATTTC
TTCGCCGTCTTCTTCGCTGAGTCTTTCTTGATCACTTTGCTAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular anatomical structure
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR001141Ribosomal_eL27
IPR018262Ribosomal_L27e_CS