Pisum_sativum_v1_Contig2232

Contig Overview
NamePisum_sativum_v1_Contig2232
Unique NamePisum_sativum_v1_Contig2232
Typecontig
OrganismPisum sativum (pea)
Sequence length617
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
FG537161ESTFG537161:283..520 +
FG535025ESTFG535025:22..568 +
EX570958ESTEX570958:1..606 +
EX570957ESTEX570957:29..619 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
FG537161FG537161Pisum sativumEST
FG535025FG535025Pisum sativumEST
EX570958EX570958Pisum sativumEST
EX570957EX570957Pisum sativumEST


Homology
[Close]
BLAST of Pisum_sativum_v1_Contig2232 vs. TrEMBL
Match: B2ZGQ6_SOYBN (NAC domain protein OS=Glycine max GN=NAC12 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 2.318e-8
Identity = 43/104 (41.35%), Postives = 56/104 (53.85%), Query Frame = 2 
Query:    5 NFNQQQQRPSQNNASNNYMSQNKNPL--------------KHHLSNIDDDNNMXXXXXXXXXXXXCNF-SNINTQYES----YLMKQSLMNQQLVLGPHHQYQG 259
            N +QQ    + NN +NNYM Q KNP               K  +SN+D++               CNF +NI+ QYE+    YLMKQSLMNQ+L+LGPH Q+QG
Sbjct:  254 NLDQQCSPINNNNPTNNYMFQ-KNPQLNPSVSNMENMMRPKRQVSNMDEET---LYPSKKYLSSSCNFPTNISNQYENPQWNYLMKQSLMNQRLMLGPHLQFQG 353
[Close]
BLAST of Pisum_sativum_v1_Contig2232 vs. TrEMBL
Match: B9U5I1_SOYBN (Transcriptional factor NAC11 OS=Glycine max GN=NAC11 PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 3.028e-8
Identity = 41/104 (39.42%), Postives = 53/104 (50.96%), Query Frame = 2 
Query:    5 NFNQQQQRPSQNNASNNYMSQNKNPL--------------KHHLSNIDDDNNMXXXXXXXXXXXXCNF-SNINTQYES----YLMKQSLMNQQLVLGPHHQYQG 259
            N     Q+PS  + SN YM Q  NP               K  +SN+D++               CNF +NIN QYE+    YLMKQSL+NQ+L+LGPH Q+QG
Sbjct:  251 NTGNLDQQPSPIDNSNGYMFQKNNPQLNPSVSNMENMMRPKRQVSNMDEET---LYPSKKYLSSSCNFPTNINNQYENPQWNYLMKQSLLNQRLMLGPHLQFQG 351
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig2232 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
B2ZGQ6_SOYBN2.318e-841.35NAC domain protein OS=Glycine max GN=NAC12 PE=2 SV... [more]
B9U5I1_SOYBN3.028e-839.42Transcriptional factor NAC11 OS=Glycine max GN=NAC... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 41..52
score
NoneNo IPR availableSEGsegsegcoord: 10..24
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig2232 ID=Pisum_sativum_v1_Contig2232; Name=Pisum_sativum_v1_Contig2232; organism=Pisum sativum; type=contig; length=617bp
TGAAAACTTTAACCAACAACAACAACGACCTTCCCAAAACAACGCTAGCA
ACAATTACATGTCACAAAACAAGAACCCTTTAAAGCACCATCTATCAAAC
ATAGATGACGACAACAACATGTTATTGTACCCATCAAAGAAATACTTGAG
TTCATCTTGCAATTTCTCTAACATCAATACACAATATGAAAGCTACCTCA
TGAAGCAATCTTTGATGAATCAACAATTGGTTTTAGGTCCTCATCATCAA
TATCAAGGATAATCCAAAATACCAAAAAAAATGGTATCCAAAAAAAAATT
AGAAAATTTAAGTAGTTAAGTAAAATTTCTAGAAGTTGAGCCCAAAAAAA
ACACAAATGGGGTCATTAAATTAAGAATTTCTAATTTTCTACTAGTACAC
AAAAATAGTGTGTTTTATTTTATTTTATTTTTTTATGATTTTTAGTTTGT
GCTAGGAATTGAAGGATGGATTAGGACTTGTTTGGTAAGGAGTCAAAAGA
AAGATTCTGCAATTGAAGACTCAATAAATTGTGAAAAGAAAATATTAAAG
TTTTATGACTAATTAGAAATAGTCGTGTACAAAATGTTGATTTATTCGTG
TATTGGGTTTGGCAACA
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