Pisum_sativum_v1_Contig2288

Contig Overview


Name	Pisum_sativum_v1_Contig2288
Unique Name	Pisum_sativum_v1_Contig2288
Type	contig
Organism	Pisum sativum (pea)
Sequence length	850

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
EX570475	EST	EX570475:1..373 -
EX570474	EST	EX570474:296..768 +
FG534295	EST	FG534295:299..775 +
FG534355	EST	FG534355:300..775 +
CD861064	EST	CD861064:300..773 -
FG528992	EST	FG528992:300..774 +
FG534000	EST	FG534000:300..850 +

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
KEGG analysis for Pisum sativum unigene v1	2011-01-05
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
EX570475	EX570475	Pisum sativum	EST
EX570474	EX570474	Pisum sativum	EST
FG534295	FG534295	Pisum sativum	EST
FG534355	FG534355	Pisum sativum	EST
CD861064	CD861064	Pisum sativum	EST
FG528992	FG528992	Pisum sativum	EST
FG534000	FG534000	Pisum sativum	EST

Homology

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. SwissProt
Match: RL34_PEA (60S ribosomal protein L34 OS=Pisum sativum GN=RPL34 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.339e-49
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct:    1 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 95

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. SwissProt
Match: RL34_TOBAC (60S ribosomal protein L34 OS=Nicotiana tabacum GN=RPL34 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.663e-47
Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            MVQRLTYR+RHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSG AVRERIIRAF
Sbjct:    1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. SwissProt
Match: RL342_ARATH (60S ribosomal protein L34-2 OS=Arabidopsis thaliana GN=RPL34B PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.255e-46
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSG AVRERIIRAF
Sbjct:    1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. SwissProt
Match: RL341_ARATH (60S ribosomal protein L34-1 OS=Arabidopsis thaliana GN=RPL34A PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.255e-46
Identity = 90/95 (94.74%), Postives = 92/95 (96.84%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRLSRNRRTVNRAYGGVLSG AVRERIIRAF
Sbjct:    1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. SwissProt
Match: RL343_ARATH (60S ribosomal protein L34-3 OS=Arabidopsis thaliana GN=RPL34C PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.019e-44
Identity = 85/95 (89.47%), Postives = 88/95 (92.63%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RN RTVNRAYGGVLSG AVRERI+RAF
Sbjct:    1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAF 95

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. SwissProt
Match: RL34A_SCHPO (60S ribosomal protein L34-A OS=Schizosaccharomyces pombe GN=rpl34a PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.058e-22
Identity = 52/95 (54.74%), Postives = 69/95 (72.63%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            M QR+TYRRR +Y T+SN+ R++KTPG  + Y   KK  + P+C  TG  +QGIP LRP E+  +RLS N++TV RAYGG LS  AV++RI+RAF
Sbjct:    1 MAQRVTYRRRLAYNTRSNRTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPREF--ARLSHNKKTVQRAYGGCLSANAVKDRIVRAF 93

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. SwissProt
Match: RL34_DICDI (60S ribosomal protein L34 OS=Dictyostelium discoideum GN=rpl34 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.510e-21
Identity = 54/95 (56.84%), Postives = 64/95 (67.37%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            MVQRLTYRRR SY T SN  ++VKTPGG+LVYQ   K    P+C   G  + GIP LRP +YK   L ++RRTV+RAYGG      VR RI+RAF
Sbjct:    1 MVQRLTYRRRLSYRTTSNATKIVKTPGGRLVYQYIGKTGKVPRCGECGVNLAGIPALRPYQYK--NLPKSRRTVSRAYGGSKCAKCVRNRIVRAF 93

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. SwissProt
Match: RL34B_SCHPO (60S ribosomal protein L34-B OS=Schizosaccharomyces pombe GN=rpl34b PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.278e-21
Identity = 51/95 (53.68%), Postives = 68/95 (71.58%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            M QR+TYRRR +Y T+SN+ R++KTPG  + Y   KK  + P+C  TG  +QGIP LRP E+  +RLS N++ V RAYGG LS  AV++RI+RAF
Sbjct:    1 MAQRVTYRRRLAYNTRSNKTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPREF--ARLSHNQKKVQRAYGGCLSANAVKDRIVRAF 93

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. SwissProt
Match: RL34_AEDTR (60S ribosomal protein L34 OS=Aedes triseriatus GN=RpL34 PE=2 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 4.734e-20
Identity = 53/95 (55.79%), Postives = 66/95 (69.47%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            MVQRLT RRR SY TKSN+ RVV+TPGG+LVY   KK+ + PKC    +++ GI   RP+E  R R+ R  +TV R +GGVL    +RERIIRAF
Sbjct:    1 MVQRLTLRRRLSYNTKSNKRRVVRTPGGRLVYLYVKKQRTVPKCGQCKEKLSGIKPSRPSE--RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAF 93

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. SwissProt
Match: RL34_AEDAL (60S ribosomal protein L34 OS=Aedes albopictus GN=RpL34 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.734e-20
Identity = 53/95 (55.79%), Postives = 66/95 (69.47%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            MVQRLT RRR SY TKSN+ RVV+TPGG+LVY   KK+ + PKC    +++ GI   RP+E  R R+ R  +TV R +GGVL    +RERIIRAF
Sbjct:    1 MVQRLTLRRRLSYNTKSNKRRVVRTPGGRLVYLYVKKQRTVPKCGQCKEKLSGIKPSRPSE--RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAF 93

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. TrEMBL
Match: Q2HVS3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MtrDRAFT_AC148762g13v2 PE=4 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 3.773e-47
Identity = 94/95 (98.95%), Postives = 94/95 (98.95%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRL RNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct:    1 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAF 95

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. TrEMBL
Match: B7FHA0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 3.773e-47
Identity = 94/95 (98.95%), Postives = 94/95 (98.95%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRL RNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct:    1 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAF 95

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. TrEMBL
Match: B9T739_RICCO (60S ribosomal protein L34, putative OS=Ricinus communis GN=RCOM_0170210 PE=4 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 8.405e-47
Identity = 92/95 (96.84%), Postives = 95/95 (100.00%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            MVQRLTYR+RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct:    1 MVQRLTYRKRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 95

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. TrEMBL
Match: B9S8W0_RICCO (60S ribosomal protein L34, putative OS=Ricinus communis GN=RCOM_0836350 PE=4 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 1.098e-46
Identity = 92/95 (96.84%), Postives = 94/95 (98.95%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            MVQRLTYR+RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct:    1 MVQRLTYRKRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 95

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. TrEMBL
Match: B7FFC0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.434e-46
Identity = 93/95 (97.89%), Postives = 93/95 (97.89%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            MVQRLTYRR HSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRL RNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct:    1 MVQRLTYRRHHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAF 95

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. TrEMBL
Match: C6SWN5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 3.194e-46
Identity = 92/95 (96.84%), Postives = 93/95 (97.89%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            MVQRLTYR+RHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL RNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct:    1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAF 95

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. TrEMBL
Match: A9PDF8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_825551 PE=4 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 4.171e-46
Identity = 92/95 (96.84%), Postives = 93/95 (97.89%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            MVQRLTYR+RHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRLSRNRRTVNRAYGGVLSG AVRERIIRAF
Sbjct:    1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. TrEMBL
Match: A9P8R1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_823446 PE=4 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 4.171e-46
Identity = 92/95 (96.84%), Postives = 93/95 (97.89%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            MVQRLTYR+RHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRLSRNRRTVNRAYGGVLSG AVRERIIRAF
Sbjct:    1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. TrEMBL
Match: A9PB27_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 5.448e-46
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            MVQRLTYR+RHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRLSRNRRTVNRAYGGVLSG AVRERIIRAF
Sbjct:    1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. TrEMBL
Match: A5C1J0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010664 PE=4 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 2.070e-45
Identity = 90/95 (94.74%), Postives = 93/95 (97.89%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            MVQRLTYR+RHSYATKSNQHRVVKTPGGKLVYQ+TKKRA+GPKCPVTGKRIQGIPHLRP EYKRSRL RNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct:    1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRANGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAF 95

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. TAIR peptide
Match: AT1G69620.1 (| Symbols: RPL34 | ribosomal protein L34 | chr1:26189900-26191081 FORWARD LENGTH=119)

HSP 1 Score: 186.037 bits (471), Expect = 2.218e-47
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSG AVRERIIRAF
Sbjct:    1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. TAIR peptide
Match: AT1G26880.1 (| Symbols: | Ribosomal protein L34e superfamily protein | chr1:9315640-9316681 REVERSE LENGTH=120)

HSP 1 Score: 186.037 bits (471), Expect = 2.218e-47
Identity = 90/95 (94.74%), Postives = 92/95 (96.84%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRLSRNRRTVNRAYGGVLSG AVRERIIRAF
Sbjct:    1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. TAIR peptide
Match: AT1G26880.2 (| Symbols: | Ribosomal protein L34e superfamily protein | chr1:9315798-9316681 REVERSE LENGTH=96)

HSP 1 Score: 178.333 bits (451), Expect = 4.625e-45
Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERII 548
            MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRLSRNRRTVNRAYGGVLSG AVRER +
Sbjct:    1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGSAVRERFV 92

[Close]

BLAST of Pisum_sativum_v1_Contig2288 vs. TAIR peptide
Match: AT3G28900.1 (| Symbols: | Ribosomal protein L34e superfamily protein | chr3:10902864-10904415 REVERSE LENGTH=120)

HSP 1 Score: 177.563 bits (449), Expect = 7.890e-45
Identity = 85/95 (89.47%), Postives = 88/95 (92.63%), Query Frame = 3

Query:  273 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 557
            MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RN RTVNRAYGGVLSG AVRERI+RAF
Sbjct:    1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAF 95

The following BLAST results are available for this feature:

BLAST of Pisum_sativum_v1_Contig2288 vs. SwissProt
BLAST of Pisum_sativum_v1_Contig2288 vs. TrEMBL
BLAST of Pisum_sativum_v1_Contig2288 vs. TAIR peptide

BLAST of Pisum_sativum_v1_Contig2288 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL34_PEA	6.339e-49	100.00	60S ribosomal protein L34 OS=Pisum sativum GN=RPL3...	[more]
RL34_TOBAC	2.663e-47	95.79	60S ribosomal protein L34 OS=Nicotiana tabacum GN=...	[more]
RL342_ARATH	2.255e-46	94.74	60S ribosomal protein L34-2 OS=Arabidopsis thalian...	[more]
RL341_ARATH	2.255e-46	94.74	60S ribosomal protein L34-1 OS=Arabidopsis thalian...	[more]
RL343_ARATH	8.019e-44	89.47	60S ribosomal protein L34-3 OS=Arabidopsis thalian...	[more]
RL34A_SCHPO	5.058e-22	54.74	60S ribosomal protein L34-A OS=Schizosaccharomyces...	[more]
RL34_DICDI	2.510e-21	56.84	60S ribosomal protein L34 OS=Dictyostelium discoid...	[more]
RL34B_SCHPO	3.278e-21	53.68	60S ribosomal protein L34-B OS=Schizosaccharomyces...	[more]
RL34_AEDTR	4.734e-20	55.79	60S ribosomal protein L34 OS=Aedes triseriatus GN=...	[more]
RL34_AEDAL	4.734e-20	55.79	60S ribosomal protein L34 OS=Aedes albopictus GN=R...	[more]

BLAST of Pisum_sativum_v1_Contig2288 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q2HVS3_MEDTR	3.773e-47	98.95	Putative uncharacterized protein OS=Medicago trunc...	[more]
B7FHA0_MEDTR	3.773e-47	98.95	Putative uncharacterized protein OS=Medicago trunc...	[more]
B9T739_RICCO	8.405e-47	96.84	60S ribosomal protein L34, putative OS=Ricinus com...	[more]
B9S8W0_RICCO	1.098e-46	96.84	60S ribosomal protein L34, putative OS=Ricinus com...	[more]
B7FFC0_MEDTR	1.434e-46	97.89	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6SWN5_SOYBN	3.194e-46	96.84	Putative uncharacterized protein OS=Glycine max PE...	[more]
A9PDF8_POPTR	4.171e-46	96.84	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9P8R1_POPTR	4.171e-46	96.84	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PB27_POPTR	5.448e-46	95.79	Putative uncharacterized protein OS=Populus tricho...	[more]
A5C1J0_VITVI	2.070e-45	94.74	Putative uncharacterized protein OS=Vitis vinifera...	[more]

BLAST of Pisum_sativum_v1_Contig2288 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT1G69620.1	2.218e-47	94.74	\| Symbols: RPL34 \| ribosomal protein L34 \| chr1:26...	[more]
AT1G26880.1	2.218e-47	94.74	\| Symbols: \| Ribosomal protein L34e superfamily p...	[more]
AT1G26880.2	4.625e-45	92.39	\| Symbols: \| Ribosomal protein L34e superfamily p...	[more]
AT3G28900.1	7.890e-45	89.47	\| Symbols: \| Ribosomal protein L34e superfamily p...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008195	Ribosomal protein L34e	PRINTS	PR01250	RIBOSOMALL34	coord: 70..83 score: 1.2e-29coord: 83..100 score: 1.2e-29coord: 101..111 score: 1.2e-29coord: 123..145 score: 1.2
IPR008195	Ribosomal protein L34e	PANTHER	PTHR10759	60S RIBOSOMAL PROTEIN L34	coord: 61..168 score: 1.4
IPR008195	Ribosomal protein L34e	PFAM	PF01199	Ribosomal_L34e	coord: 58..153 score: 1.6
IPR008195	Ribosomal protein L34e	PANTHER	PTHR10759	60S RIBOSOMAL PROTEIN L34	coord: 15..50 score: 1.2
IPR008195	Ribosomal protein L34e	PFAM	PF01199	Ribosomal_L34e	coord: 13..35 score: 5.5
IPR018065	Ribosomal protein L34e, conserved site	PROSITE	PS01145	RIBOSOMAL_L34E	coord: 72..85 score
None	No IPR available	SEG	seg	seg	coord: 153..173 score
None	No IPR available	SEG	seg	seg	coord: 35..55 score
None	No IPR available	SEG	seg	seg	coord: 32..49 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Pisum_sativum_v1_Contig2288 ID=Pisum_sativum_v1_Contig2288; Name=Pisum_sativum_v1_Contig2288; organism=Pisum sativum; type=contig; length=850bp
TCTCACATTCATAATTAACAACATTCAAAGTCAAAACTCTTCAGAACAAA
TCAAAAAAGGAATTTCTAACTTGTTTTTCATTCATTAACAACATAACTTA
ATTCTTAGCTGCTTGCTTTTCTTTTGTCTTCTGTATCTTCAAAACTTTCT
TAACAATTTTTTGCTCTTCAACAAGGAAAGCACGAATAATCCTTTCCCTA
ACAGCTCCTCCAGATAAAACACCTCCATATGCTCTTTCACTTTCTAGGGT
TTCAGCTTCAACAATAATCAACATGGTTCAGAGACTCACATACCGAAGGA
GGCATAGCTACGCCACCAAATCCAACCAACATCGAGTTGTTAAGACTCCT
GGTGGAAAGTTGGTTTATCAGACGACTAAGAAGAGGGCGAGTGGACCTAA
GTGTCCTGTTACTGGAAAGAGGATCCAAGGGATTCCACATTTGAGACCTA
CTGAATACAAGAGGTCTAGATTGTCTCGCAACCGCCGAACAGTTAACAGA
GCATATGGAGGTGTTTTATCTGGAGGAGCTGTTAGGGAAAGGATTATTCG
TGCTTTCCTTGTTGAAGAGCAAAAAATTGTTAAGAAAGTTTTGAAGATAC
AGAAGACAAAAGAAAAGCAAGCAGCTAAGAATTAAGTTATGTTGTTAATG
GATGAAAAACAAGTTAGAAATTCCTTTTTTGATTTGTTCTGAAGAGTTTT
GACTTTGAATGTTGTTAATTATGAATGTGAGACTTGCTTTGAAATTAATT
TTATGGAGTTTTATGTTTTTTCTGTACTCTATATTTTGTTATAGCTTGTT
GAGTTCTGTCATTCCAGTGCGTATGATGTTAAATGAAAAACTCTTTTGAT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR008195	Ribosomal_eL34
IPR018065	Ribosomal_L34e_CS

Search form

Pisum_sativum_v1_Contig2288