Pisum_sativum_v1_Contig2503

Contig Overview


Name	Pisum_sativum_v1_Contig2503
Unique Name	Pisum_sativum_v1_Contig2503
Type	contig
Organism	Pisum sativum (pea)
Sequence length	821

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
AJ308189	EST	AJ308189:22..181 +
CD861290	EST	CD861290:184..453 +
EX571095	EST	EX571095:1..775 +
FG533749	EST	FG533749:255..821 +

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
KEGG analysis for Pisum sativum unigene v1	2011-01-05
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
AJ308189	AJ308189	Pisum sativum	EST
CD861290	CD861290	Pisum sativum	EST
EX571095	EX571095	Pisum sativum	EST
FG533749	FG533749	Pisum sativum	EST

Homology

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. SwissProt
Match: RS103_ARATH (40S ribosomal protein S10-3 OS=Arabidopsis thaliana GN=RPS10C PE=2 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 2.155e-46
Identity = 87/97 (89.69%), Postives = 93/97 (95.88%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKP 362
            MIISE NR+EI KYLF+EGVC+AKKDFNLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTN+GIEFLRTYLNLPS++VPATLKK AKP
Sbjct:    1 MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP 97

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. SwissProt
Match: RS101_ARATH (40S ribosomal protein S10-1 OS=Arabidopsis thaliana GN=RPS10A PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.815e-46
Identity = 87/97 (89.69%), Postives = 92/97 (94.85%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKP 362
            MIISE NRREI KYLF+EGVC+AKKDFNL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTN+GIEFLRTYLNLPS++VPATLKK AKP
Sbjct:    1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP 97

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. SwissProt
Match: RS102_ARATH (40S ribosomal protein S10-2 OS=Arabidopsis thaliana GN=RPS10B PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.230e-43
Identity = 86/98 (87.76%), Postives = 92/98 (93.88%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKP 362
            MIISE NRREISKYLF+EGV +AKKDFNL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTN+GI+FLRTYLNLPSEIVPATLKKQ KP
Sbjct:    1 MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKP 98

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. SwissProt
Match: RS10_ORYSJ (40S ribosomal protein S10 OS=Oryza sativa subsp. japonica GN=RPS10 PE=2 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 4.968e-43
Identity = 82/97 (84.54%), Postives = 89/97 (91.75%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKP 362
            MII +KNR EI KYLFQEGV YAKKD+NLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +YYW+LTNDGIE LR YLNLPSEIVPATLKK A+P
Sbjct:    1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFSWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARP 97

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. SwissProt
Match: RS10_LUMRU (40S ribosomal protein S10 OS=Lumbricus rubellus GN=RPS10 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.269e-30
Identity = 61/97 (62.89%), Postives = 78/97 (80.41%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKP 362
            M++S+KNR  I +YLF+EGV  AKKDF+L KH EIDVPNL VI+ MQS  S+ YV+E F W HYYW+L N+GI++LR +L+LP EIVPATLK+Q +P
Sbjct:    1 MLMSKKNRVMIYEYLFKEGVLVAKKDFHLPKHGEIDVPNLHVIRAMQSLVSRGYVKEQFCWRHYYWYLQNEGIQYLRDFLHLPPEIVPATLKRQTRP 97

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. SwissProt
Match: RS10_SPOFR (40S ribosomal protein S10 OS=Spodoptera frugiperda GN=RpS10 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.188e-28
Identity = 57/97 (58.76%), Postives = 79/97 (81.44%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAK 359
            M++ ++NR  I +YLF+EGV  AKKD++  KHP+++ +PNLQVIK MQS KS+ YV+E FAW H+YW+LTN+GIE+LR +L+LP EIVPATLK+  +
Sbjct:    1 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR 97

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. SwissProt
Match: RS10_ICTPU (40S ribosomal protein S10 OS=Ictalurus punctatus GN=rps10 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.457e-28
Identity = 59/100 (59.00%), Postives = 79/100 (79.00%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEI---DVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKP 362
            M++ +KNR  I + LF+EGV  AKKD +LAKHPE+   +VPNL V+K MQS KS  YV+E FAW H+YW+LTN+GI++LR +L+LP EIVPATL++Q +P
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVHLAKHPELADKNVPNLHVMKAMQSLKSCGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTRP 100

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. SwissProt
Match: RS10B_SCHPO (40S ribosomal protein S10-B OS=Schizosaccharomyces pombe GN=rps10b PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.519e-27
Identity = 55/98 (56.12%), Postives = 76/98 (77.55%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPA 365
            M+I ++NR+ I + LFQ+GV  AKKDFNL KHPE+ VPNLQVIK  QS  S+ Y++  + W  +Y+ LTN+G+E+LR YL+LP+E+VPAT K+Q +PA
Sbjct:    1 MLIPKENRKAIHQALFQQGVLVAKKDFNLPKHPEVGVPNLQVIKACQSLDSRGYLKTRYNWGWFYYTLTNEGVEYLREYLHLPAEVVPATHKRQVRPA 98

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. SwissProt
Match: RS10_RAT (40S ribosomal protein S10 OS=Rattus norvegicus GN=Rps10 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.514e-27
Identity = 56/96 (58.33%), Postives = 76/96 (79.17%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEI---DVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKK 350
            M++ +KNR  I + LF+EGV  AKKD ++ KHPE+   +VPNL V+K MQS KS+ YV+E FAW H+YW+LTN+GI++LR YL+LP EIVPATL++
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRR 96

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. SwissProt
Match: RS10_MOUSE (40S ribosomal protein S10 OS=Mus musculus GN=Rps10 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.514e-27
Identity = 56/96 (58.33%), Postives = 76/96 (79.17%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEI---DVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKK 350
            M++ +KNR  I + LF+EGV  AKKD ++ KHPE+   +VPNL V+K MQS KS+ YV+E FAW H+YW+LTN+GI++LR YL+LP EIVPATL++
Sbjct:    1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRR 96

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. TrEMBL
Match: A9PHC9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_814578 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.897e-49
Identity = 95/98 (96.94%), Postives = 98/98 (100.00%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPA 365
            MIISEKNRREISKYLFQEGVCYAKKD+NLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWM+YYW+LTNDGIEFLRTYLNLPSEIVPATLKKQAKPA
Sbjct:    1 MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMYYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPA 98

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. TrEMBL
Match: A9PJV7_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 4.942e-49
Identity = 95/98 (96.94%), Postives = 97/98 (98.98%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPA 365
            MII EKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWM+YYW+LTNDGIEFLRTYLNLPSEIVPATLKKQAKPA
Sbjct:    1 MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMYYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPA 98

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. TrEMBL
Match: A9PC38_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 4.942e-49
Identity = 95/98 (96.94%), Postives = 97/98 (98.98%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPA 365
            MII EKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWM+YYW+LTNDGIEFLRTYLNLPSEIVPATLKKQAKPA
Sbjct:    1 MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMYYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPA 98

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. TrEMBL
Match: B9RCG9_RICCO (40S ribosomal protein S10, putative OS=Ricinus communis GN=RCOM_1688110 PE=4 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 1.101e-48
Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKP 362
            MII EKNRREISKYLFQEGVCYAKKDFNLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQ+KP
Sbjct:    1 MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPNIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQSKP 97

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. TrEMBL
Match: B9H3L7_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_198910 PE=4 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.878e-48
Identity = 94/97 (96.91%), Postives = 96/97 (98.97%), Query Frame = 3

Query:   75 IISEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPA 365
            II EKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWM+YYW+LTNDGIEFLRTYLNLPSEIVPATLKKQAKPA
Sbjct:    2 IIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMYYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPA 98

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. TrEMBL
Match: B9RIS9_RICCO (40S ribosomal protein S10, putative OS=Ricinus communis GN=RCOM_1582170 PE=4 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 3.203e-48
Identity = 93/98 (94.90%), Postives = 95/98 (96.94%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPA 365
            MII EKNRREISKYLFQEGVCYAKKDFNLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTNDGIEFLRTYLNLPSEIVPATLKK A+PA
Sbjct:    1 MIIPEKNRREISKYLFQEGVCYAKKDFNLAKHPHIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSARPA 98

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. TrEMBL
Match: B9MZP7_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_922316 PE=4 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 4.184e-48
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 3

Query:   75 IISEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPA 365
            II EKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWM+YYW+LTNDGIEFLRTYLNLPSEIVPATLKKQ+KPA
Sbjct:    2 IIPEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMYYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQSKPA 98

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. TrEMBL
Match: B7FGT6_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 4.184e-48
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKP 362
            MIISEKNR+EI KYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKS+EYVRETFAWM+YYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKP
Sbjct:    1 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMNYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKP 97

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. TrEMBL
Match: Q2XTB2_SOLTU (40S ribosomal protein S10-like OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 5.464e-48
Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKP 362
            MIISEKNRREISKYLFQEGVCYAKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTNDGIEFLRTYLNLPSEIVPATLKK AKP
Sbjct:    1 MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKP 97

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. TrEMBL
Match: Q2XPV4_SOLTU (40S ribosomal protein S10-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 7.137e-48
Identity = 92/97 (94.85%), Postives = 95/97 (97.94%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKP 362
            MIISEKNRREISKYLFQEGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYW+LTNDGIEFLRTYLNLPSEIVPATLKK AKP
Sbjct:    1 MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPNIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKP 97

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. TAIR peptide
Match: AT5G52650.1 (| Symbols: | RNA binding Plectin/S10 domain-containing protein | chr5:21355781-21357003 REVERSE LENGTH=179)

HSP 1 Score: 186.037 bits (471), Expect = 2.109e-47
Identity = 87/97 (89.69%), Postives = 93/97 (95.88%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKP 362
            MIISE NR+EI KYLF+EGVC+AKKDFNLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTN+GIEFLRTYLNLPS++VPATLKK AKP
Sbjct:    1 MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP 97

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. TAIR peptide
Match: AT4G25740.2 (| Symbols: | RNA binding Plectin/S10 domain-containing protein | chr4:13107488-13108751 REVERSE LENGTH=149)

HSP 1 Score: 185.652 bits (470), Expect = 2.755e-47
Identity = 87/97 (89.69%), Postives = 92/97 (94.85%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKP 362
            MIISE NRREI KYLF+EGVC+AKKDFNL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTN+GIEFLRTYLNLPS++VPATLKK AKP
Sbjct:    1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP 97

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. TAIR peptide
Match: AT4G25740.1 (| Symbols: | RNA binding Plectin/S10 domain-containing protein | chr4:13107488-13108751 REVERSE LENGTH=177)

HSP 1 Score: 185.652 bits (470), Expect = 2.755e-47
Identity = 87/97 (89.69%), Postives = 92/97 (94.85%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKP 362
            MIISE NRREI KYLF+EGVC+AKKDFNL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTN+GIEFLRTYLNLPS++VPATLKK AKP
Sbjct:    1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP 97

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. TAIR peptide
Match: AT5G41520.1 (| Symbols: | RNA binding Plectin/S10 domain-containing protein | chr5:16609377-16610583 REVERSE LENGTH=180)

HSP 1 Score: 176.022 bits (445), Expect = 2.183e-44
Identity = 86/98 (87.76%), Postives = 92/98 (93.88%), Query Frame = 3

Query:   72 MIISEKNRREISKYLFQEGVCYAKKDFNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKP 362
            MIISE NRREISKYLF+EGV +AKKDFNL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTN+GI+FLRTYLNLPSEIVPATLKKQ KP
Sbjct:    1 MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKP 98

[Close]

BLAST of Pisum_sativum_v1_Contig2503 vs. TAIR peptide
Match: AT5G41520.2 (| Symbols: | RNA binding Plectin/S10 domain-containing protein | chr5:16609377-16610203 REVERSE LENGTH=134)

HSP 1 Score: 108.612 bits (270), Expect = 4.279e-24
Identity = 49/52 (94.23%), Postives = 51/52 (98.08%), Query Frame = 3

Query:  207 MQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKP 362
            MQSFKSKEYVRETFAWMHYYWFLTN+GI+FLRTYLNLPSEIVPATLKKQ KP
Sbjct:    1 MQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKP 52

The following BLAST results are available for this feature:

BLAST of Pisum_sativum_v1_Contig2503 vs. SwissProt
BLAST of Pisum_sativum_v1_Contig2503 vs. TrEMBL
BLAST of Pisum_sativum_v1_Contig2503 vs. TAIR peptide

BLAST of Pisum_sativum_v1_Contig2503 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RS103_ARATH	2.155e-46	89.69	40S ribosomal protein S10-3 OS=Arabidopsis thalian...	[more]
RS101_ARATH	2.815e-46	89.69	40S ribosomal protein S10-1 OS=Arabidopsis thalian...	[more]
RS102_ARATH	2.230e-43	87.76	40S ribosomal protein S10-2 OS=Arabidopsis thalian...	[more]
RS10_ORYSJ	4.968e-43	84.54	40S ribosomal protein S10 OS=Oryza sativa subsp. j...	[more]
RS10_LUMRU	1.269e-30	62.89	40S ribosomal protein S10 OS=Lumbricus rubellus GN...	[more]
RS10_SPOFR	1.188e-28	58.76	40S ribosomal protein S10 OS=Spodoptera frugiperda...	[more]
RS10_ICTPU	3.457e-28	59.00	40S ribosomal protein S10 OS=Ictalurus punctatus G...	[more]
RS10B_SCHPO	6.519e-27	56.12	40S ribosomal protein S10-B OS=Schizosaccharomyces...	[more]
RS10_RAT	8.514e-27	58.33	40S ribosomal protein S10 OS=Rattus norvegicus GN=...	[more]
RS10_MOUSE	8.514e-27	58.33	40S ribosomal protein S10 OS=Mus musculus GN=Rps10...	[more]

BLAST of Pisum_sativum_v1_Contig2503 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A9PHC9_POPTR	2.897e-49	96.94	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PJV7_9ROSI	4.942e-49	96.94	Putative uncharacterized protein OS=Populus tricho...	[more]
A9PC38_POPTR	4.942e-49	96.94	Putative uncharacterized protein OS=Populus tricho...	[more]
B9RCG9_RICCO	1.101e-48	96.91	40S ribosomal protein S10, putative OS=Ricinus com...	[more]
B9H3L7_POPTR	1.878e-48	96.91	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
B9RIS9_RICCO	3.203e-48	94.90	40S ribosomal protein S10, putative OS=Ricinus com...	[more]
B9MZP7_POPTR	4.184e-48	95.88	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
B7FGT6_MEDTR	4.184e-48	95.88	Putative uncharacterized protein OS=Medicago trunc...	[more]
Q2XTB2_SOLTU	5.464e-48	95.88	40S ribosomal protein S10-like OS=Solanum tuberosu...	[more]
Q2XPV4_SOLTU	7.137e-48	94.85	40S ribosomal protein S10-like protein OS=Solanum ...	[more]

BLAST of Pisum_sativum_v1_Contig2503 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G52650.1	2.109e-47	89.69	\| Symbols: \| RNA binding Plectin/S10 domain-conta...	[more]
AT4G25740.2	2.755e-47	89.69	\| Symbols: \| RNA binding Plectin/S10 domain-conta...	[more]
AT4G25740.1	2.755e-47	89.69	\| Symbols: \| RNA binding Plectin/S10 domain-conta...	[more]
AT5G41520.1	2.183e-44	87.76	\| Symbols: \| RNA binding Plectin/S10 domain-conta...	[more]
AT5G41520.2	4.279e-24	94.23	\| Symbols: \| RNA binding Plectin/S10 domain-conta...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 33..43 score: NAcoord: 68..83 score
None	No IPR available	SEG	seg	seg	coord: 8..24 score
None	No IPR available	PANTHER	PTHR12146	40S RIBOSOMAL PROTEIN S10	coord: 25..204 score: 4.7
None	No IPR available	SEG	seg	seg	coord: 10..19 score: NAcoord: 122..171 score: NAcoord: 177..197 score
None	No IPR available	SEG	seg	seg	coord: 5..58 score
None	No IPR available	SEG	seg	seg	coord: 5..20 score: NAcoord: 45..55 score: NAcoord: 72..91 score
IPR005326	Plectin/S10, N-terminal	PFAM	PF03501	S10_plectin	coord: 26..119 score: 1.4

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Pisum_sativum_v1_Contig2503 ID=Pisum_sativum_v1_Contig2503; Name=Pisum_sativum_v1_Contig2503; organism=Pisum sativum; type=contig; length=821bp
GCAGCAGCGATAGAGAGTATTGGGAGTTTTTGCTGCTGAACATTCTCTTG
TGCCGCCTCCACATTGCAACCATGATCATATCCGAGAAAAATCGCAGAGA
GATCTCCAAATACCTCTTCCAAGAGGGAGTTTGCTATGCAAAGAAGGACT
TCAATTTGGCAAAGCACCCTGAGATTGATGTACCAAATCTGCAAGTGATT
AAGCTGATGCAGAGTTTCAAATCTAAGGAATATGTGAGGGAGACTTTTGC
TTGGATGCATTATTACTGGTTTTTGACTAATGATGGAATCGAGTTCCTCA
GGACTTATCTCAATCTTCCATCTGAGATTGTGCCAGCTACTTTGAAGAAG
CAGGCTAAGCCAGCTGGTAGACCATTCGGTGGTCCACCTGGTGATCGCCC
TAGAGGCCCACCTAGATTTGAGGGAGAAAGGAGATTTGGCGGTGACCGTG
ATGGGTACCGTGGTGGTCCAGGTCCCAGAGGGCCTGGCGGTGAGTTTGGT
GGAGACAAGGGTGGAGCTCCTGCTGATTACAGACCTTCTTTCGGGGGTCC
TGGTGGAAGACCTGGCTTTGGTCGTGGTTCTGGTGGCTTTGGAGCACCAA
CAAGTTCAAACGATGCTTAAATGTTATGATTTCTGATCCAGTTCTTGCAG
TTTTGGCTGTCTTTAGATCCTATAGTATTTCCCCCTTCTCTCAAAGTTGT
TTAATCCCTCTGACATTTTAATTTATAGTTATTCATGCAATGAAGATTTT
GAACTGAATGTTTTTGTTAGTATTATGTTGATTTGTTTATGTTTGGATAA
TAGATCGTGATGGTGTTGGTT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR005326	Plectin_eS10_N

Search form

Pisum_sativum_v1_Contig2503