Pisum_sativum_v1_Contig2642

Contig Overview
NamePisum_sativum_v1_Contig2642
Unique NamePisum_sativum_v1_Contig2642
Typecontig
OrganismPisum sativum (pea)
Sequence length540
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
FG532017ESTFG532017:92..460 +
AM162200ESTAM162200:1..540 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
FG532017FG532017Pisum sativumEST
AM162200AM162200Pisum sativumEST


Homology
[Close]
BLAST of Pisum_sativum_v1_Contig2642 vs. TrEMBL
Match: C6TIN0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.269e-58
Identity = 104/133 (78.20%), Postives = 112/133 (84.21%), Query Frame = 3 
Query:   81 ITLKDIGLQEKFKQLGLQLFIASLVILTLNTXXXXXXXXXXXGAKIDLPYFATEITAPSSPFALSLAKYLHSIGAKMYGAFWCSHCLEQKEMFGREAAKQLEYVECFPDGFRTGTKMIDACIDAKIEGFPTWI 479
            +TLKDIGLQE  KQLGLQL +ASLVIL+LN             A+ DLPYFATEIT PSSPFALSLA++LHSIGAKMYGAFWCSHC EQKEMFGREAAKQL+YVECFPDGFR GTKMI ACIDAK+EGFPTWI
Sbjct:  190 VTLKDIGLQEVSKQLGLQLLVASLVILSLNASYSNSKSASSSLAENDLPYFATEITTPSSPFALSLARHLHSIGAKMYGAFWCSHCQEQKEMFGREAAKQLDYVECFPDGFRRGTKMIKACIDAKLEGFPTWI 322

HSP 2 Score: 38.1206 bits (87), Expect = 1.269e-58
Identity = 21/28 (75.00%), Postives = 22/28 (78.57%), Query Frame = 1 
Query:  469 LHGF----INGQVLSGEAELSELAQMSG 540
            L GF    INGQVLSGE ELSELAQ+SG
Sbjct:  315 LEGFPTWIINGQVLSGEVELSELAQVSG 342
[Close]
BLAST of Pisum_sativum_v1_Contig2642 vs. TrEMBL
Match: B9MX97_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_593776 PE=4 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 4.589e-49
Identity = 90/133 (67.67%), Postives = 103/133 (77.44%), Query Frame = 3 
Query:   81 ITLKDIGLQEKFKQLGLQLFIASLVILTLNTXXXXXXXXXXXGAKIDLPYFATEITAPSSPFALSLAKYLHSIGAKMYGAFWCSHCLEQKEMFGREAAKQLEYVECFPDGFRTGTKMIDACIDAKIEGFPTWI 479
            ITLKD GL+E  K LGLQL IAS+VI +LNT            A I+L YF TEIT PSSPFA+SLA++L S GAKMYGAFWCSHC EQK+MFG+EAA+ L YVECFP+GFR GTKMI AC DAK+EGFPTW+
Sbjct:  167 ITLKDFGLEEIQKFLGLQLCIASVVIFSLNTSYATLQRASSSVADINLEYFTTEITTPSSPFAISLARHLQSTGAKMYGAFWCSHCQEQKQMFGKEAAELLNYVECFPNGFRKGTKMIKACADAKLEGFPTWV 299

HSP 2 Score: 35.039 bits (79), Expect = 4.589e-49
Identity = 19/28 (67.86%), Postives = 22/28 (78.57%), Query Frame = 1 
Query:  469 LHGF----INGQVLSGEAELSELAQMSG 540
            L GF    INGQVLSG+ ELSELA++SG
Sbjct:  292 LEGFPTWVINGQVLSGDQELSELAKVSG 319
[Close]
BLAST of Pisum_sativum_v1_Contig2642 vs. TrEMBL
Match: B9SXL1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0017300 PE=4 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 8.466e-48
Identity = 85/133 (63.91%), Postives = 103/133 (77.44%), Query Frame = 3 
Query:   81 ITLKDIGLQEKFKQLGLQLFIASLVILTLNTXXXXXXXXXXXGAKIDLPYFATEITAPSSPFALSLAKYLHSIGAKMYGAFWCSHCLEQKEMFGREAAKQLEYVECFPDGFRTGTKMIDACIDAKIEGFPTWI 479
            ITLKD GLQ+  K LGLQ+ +ASLV+  LN             A++DLPY   EITA SSPFALSLA++L SIGAK+YGAFWCSHCLEQK+MFG++A+K L+YVECFP+G+R GTK+  AC DAKIEGFPTW+
Sbjct:  160 ITLKDFGLQDIQKVLGLQICVASLVVAALNASYGTSPPISSSLAEVDLPYVTYEITATSSPFALSLARHLKSIGAKIYGAFWCSHCLEQKQMFGKDASKMLDYVECFPNGYRKGTKIAKACADAKIEGFPTWV 292

HSP 2 Score: 35.4242 bits (80), Expect = 8.466e-48
Identity = 16/20 (80.00%), Postives = 19/20 (95.00%), Query Frame = 1 
Query:  481 INGQVLSGEAELSELAQMSG 540
            ING+V+SGE ELSELAQ+SG
Sbjct:  293 INGEVVSGELELSELAQLSG 312
[Close]
BLAST of Pisum_sativum_v1_Contig2642 vs. TrEMBL
Match: D7MC43_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_491070 PE=4 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.690e-45
Identity = 80/133 (60.15%), Postives = 103/133 (77.44%), Query Frame = 3 
Query:   81 ITLKDIGLQEKFKQLGLQLFIASLVILTLNTXXXXXXXXXXXGAKIDLPYFATEITAPSSPFALSLAKYLHSIGAKMYGAFWCSHCLEQKEMFGREAAKQLEYVECFPDGFRTGTKMIDACIDAKIEGFPTWI 479
            +++KD+ LQE  + +GLQ+ +A +V+ +L                I+LPYF TEI++ SSP+A++LAK+L+SIGAKMYGAFWCSHCLEQKEMFGREAAKQL YVECFPDG++ GTK++ AC DA IEGFPTWI
Sbjct:  210 LSVKDVKLQEIQQVVGLQICLAIIVVASLTASYSTAQPIPSRSGDIELPYFRTEISSTSSPYAIALAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKQLNYVECFPDGYKKGTKILKACADAGIEGFPTWI 342

HSP 2 Score: 33.8834 bits (76), Expect = 1.690e-45
Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = 1 
Query:  481 INGQVLSGEAELSELAQMSG 540
            IN QVLSGE EL+ELA+MSG
Sbjct:  343 INDQVLSGEIELAELAEMSG 362
[Close]
BLAST of Pisum_sativum_v1_Contig2642 vs. TrEMBL
Match: Q8L540_ARATH (Putative uncharacterized protein At4g35760 OS=Arabidopsis thaliana GN=At4g35760 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.833e-44
Identity = 79/133 (59.40%), Postives = 103/133 (77.44%), Query Frame = 3 
Query:   81 ITLKDIGLQEKFKQLGLQLFIASLVILTLNTXXXXXXXXXXXGAKIDLPYFATEITAPSSPFALSLAKYLHSIGAKMYGAFWCSHCLEQKEMFGREAAKQLEYVECFPDGFRTGTKMIDACIDAKIEGFPTWI 479
            +++KD+ LQE  + +GLQ+ +A +V+ +L                I+LPYF TEI++ SSP+A++LAK+L+SIGAKMYGAFWCSHCLEQKEMFGREAAK+L YVECFPDG++ GTK++ AC DA IEGFPTWI
Sbjct:  211 LSVKDVKLQEIQQVVGLQICLAIIVVASLTASYSTAQPIPSRSGDIELPYFRTEISSSSSPYAIALAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKELNYVECFPDGYKKGTKILKACADAAIEGFPTWI 343

HSP 2 Score: 31.187 bits (69), Expect = 1.833e-44
Identity = 14/20 (70.00%), Postives = 18/20 (90.00%), Query Frame = 1 
Query:  481 INGQVLSGEAELSELAQMSG 540
            IN +VLSGE EL+ELA+M+G
Sbjct:  344 INDKVLSGEIELAELAEMTG 363
[Close]
BLAST of Pisum_sativum_v1_Contig2642 vs. TrEMBL
Match: Q8L9V9_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.833e-44
Identity = 79/133 (59.40%), Postives = 103/133 (77.44%), Query Frame = 3 
Query:   81 ITLKDIGLQEKFKQLGLQLFIASLVILTLNTXXXXXXXXXXXGAKIDLPYFATEITAPSSPFALSLAKYLHSIGAKMYGAFWCSHCLEQKEMFGREAAKQLEYVECFPDGFRTGTKMIDACIDAKIEGFPTWI 479
            +++KD+ LQE  + +GLQ+ +A +V+ +L                I+LPYF TEI++ SSP+A++LAK+L+SIGAKMYGAFWCSHCLEQKEMFGREAAK+L YVECFPDG++ GTK++ AC DA IEGFPTWI
Sbjct:  210 LSVKDVKLQEIQQVVGLQICLAIIVVASLTASYSTAQPIPSRSGDIELPYFRTEISSSSSPYAIALAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKELNYVECFPDGYKKGTKILKACADAAIEGFPTWI 342

HSP 2 Score: 31.187 bits (69), Expect = 1.833e-44
Identity = 14/20 (70.00%), Postives = 18/20 (90.00%), Query Frame = 1 
Query:  481 INGQVLSGEAELSELAQMSG 540
            IN +VLSGE EL+ELA+M+G
Sbjct:  343 INDKVLSGEIELAELAEMTG 362
[Close]
BLAST of Pisum_sativum_v1_Contig2642 vs. TrEMBL
Match: O81807_ARATH (Putative uncharacterized protein AT4g35760 OS=Arabidopsis thaliana GN=F8D20.270 PE=4 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.838e-44
Identity = 80/133 (60.15%), Postives = 102/133 (76.69%), Query Frame = 3 
Query:   81 ITLKDIGLQEKFKQLGLQLFIASLVILTLNTXXXXXXXXXXXGAKIDLPYFATEITAPSSPFALSLAKYLHSIGAKMYGAFWCSHCLEQKEMFGREAAKQLEYVECFPDGFRTGTKMIDACIDAKIEGFPTWI 479
            I L+D+ LQE  + +GLQ+ +A +V+ +L                I+LPYF TEI++ SSP+A++LAK+L+SIGAKMYGAFWCSHCLEQKEMFGREAAK+L YVECFPDG++ GTK++ AC DA IEGFPTWI
Sbjct:  138 IALQDVKLQEIQQVVGLQICLAIIVVASLTASYSTAQPIPSRSGDIELPYFRTEISSSSSPYAIALAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKELNYVECFPDGYKKGTKILKACADAAIEGFPTWI 270

HSP 2 Score: 31.187 bits (69), Expect = 1.838e-44
Identity = 14/20 (70.00%), Postives = 18/20 (90.00%), Query Frame = 1 
Query:  481 INGQVLSGEAELSELAQMSG 540
            IN +VLSGE EL+ELA+M+G
Sbjct:  271 INDKVLSGEIELAELAEMTG 290
[Close]
BLAST of Pisum_sativum_v1_Contig2642 vs. TrEMBL
Match: A5C1X1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010788 PE=4 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.936e-40
Identity = 82/132 (62.12%), Postives = 96/132 (72.73%), Query Frame = 3 
Query:   84 TLKDIGLQEKFKQLGLQLFIASLVILTLNTXXXXXXXXXXXGAKIDLPYFATEITAPSSPFALSLAKYLHSIGAKMYGAFWCSHCLEQKEMFGREAAKQLEYVECFPDGFRTGTKMIDACIDAKIEGFPTWI 479
            +LKD  L++  K + LQL IASLV+ TL+T            A+IDL  F  EIT  SSP ALSLAK+L SIGAKMYGAFWCSHC+EQK+MFGREAAK L+YVECFP+G+R G KM  AC  A IEGFPTW+
Sbjct:  259 SLKDFQLKDIQKTVVLQLCIASLVVATLSTSYNTLPVSTSL-AEIDLQPFTVEITTQSSPLALSLAKHLRSIGAKMYGAFWCSHCVEQKQMFGREAAKLLDYVECFPNGYRKGIKMDKACSAAXIEGFPTWV 389

HSP 2 Score: 32.3426 bits (72), Expect = 1.936e-40
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 1 
Query:  481 INGQVLSGEAELSELAQMSG 540
            ING+VLSGE E SELA+ SG
Sbjct:  390 INGEVLSGEQEFSELARASG 409
[Close]
BLAST of Pisum_sativum_v1_Contig2642 vs. TrEMBL
Match: B4FGV5_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.247e-34
Identity = 69/132 (52.27%), Postives = 84/132 (63.64%), Query Frame = 3 
Query:   81 ITLKDIGLQEKFKQLGLQLFIASLVILTLNTXXXXXXXXXXXGAKIDLPYFATEITAPSSPFALSLAKYLHSIGAKMYGAFWCSHCLEQKEMFGREAAKQLEYVECFPDGFRTGTKMIDACIDAKIEGFPTW 476
            I +KDIG +   K  G+QL +A ++ L L                  L  + TEI+  SSPFA++LAK+LHSIGAKMYGAFWCSHC EQK+MFG EA K L+YVECFP+G   G KM   C  A +EGFPTW
Sbjct:  206 IRVKDIGFERIQKFAGIQLAVAVIIALALTNSYSSATTQLKGTDDFVLQPYETEISTESSPFAIALAKHLHSIGAKMYGAFWCSHCNEQKQMFGHEATKILDYVECFPNGAGKGKKMTAECAAAGLEGFPTW 337

HSP 2 Score: 30.4166 bits (67), Expect = 5.247e-34
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 1 
Query:  478 FINGQVLSGEAELSELAQMSG 540
            FING++LSG+ EL  LA+ SG
Sbjct:  338 FINGKILSGDQELEVLAEASG 358
[Close]
BLAST of Pisum_sativum_v1_Contig2642 vs. TrEMBL
Match: C5WZV6_SORBI (Putative uncharacterized protein Sb01g048220 OS=Sorghum bicolor GN=Sb01g048220 PE=4 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.155e-33
Identity = 69/132 (52.27%), Postives = 84/132 (63.64%), Query Frame = 3 
Query:   81 ITLKDIGLQEKFKQLGLQLFIASLVILTLNTXXXXXXXXXXXGAKIDLPYFATEITAPSSPFALSLAKYLHSIGAKMYGAFWCSHCLEQKEMFGREAAKQLEYVECFPDGFRTGTKMIDACIDAKIEGFPTW 476
            I +KD G +   K  G+QL +A ++ L L                  L  + TEIT  SSPFA++LA++LHSIGAKMYGAFWCSHC EQK+MFGREA K L+YVECFP+G   G KM   C  A +EGFPTW
Sbjct:  330 IRVKDFGFERIQKFAGIQLAVAVIIALALTNSYSSATTQLKGTDDFVLEPYETEITTESSPFAIALARHLHSIGAKMYGAFWCSHCNEQKQMFGREATKILDYVECFPNGAGKGKKMTAECAAAGLEGFPTW 461

HSP 2 Score: 28.4906 bits (62), Expect = 1.155e-33
Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 1 
Query:  478 FINGQVLSGEAELSELAQMS 537
            FING+VLSG+ EL  LA+ S
Sbjct:  462 FINGKVLSGDQELEVLAEAS 481
[Close]
BLAST of Pisum_sativum_v1_Contig2642 vs. TAIR peptide
Match: AT4G35760.1 (| Symbols: | NAD(P)H dehydrogenase (quinone)s | chr4:16942733-16944622 REVERSE LENGTH=376)

HSP 1 Score: 172.555 bits (436), Expect = 1.502e-46
Identity = 79/133 (59.40%), Postives = 103/133 (77.44%), Query Frame = 3 
Query:   81 ITLKDIGLQEKFKQLGLQLFIASLVILTLNTXXXXXXXXXXXGAKIDLPYFATEITAPSSPFALSLAKYLHSIGAKMYGAFWCSHCLEQKEMFGREAAKQLEYVECFPDGFRTGTKMIDACIDAKIEGFPTWI 479
            +++KD+ LQE  + +GLQ+ +A +V+ +L                I+LPYF TEI++ SSP+A++LAK+L+SIGAKMYGAFWCSHCLEQKEMFGREAAK+L YVECFPDG++ GTK++ AC DA IEGFPTWI
Sbjct:  211 LSVKDVKLQEIQQVVGLQICLAIIVVASLTASYSTAQPIPSRSGDIELPYFRTEISSSSSPYAIALAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKELNYVECFPDGYKKGTKILKACADAAIEGFPTWI 343

HSP 2 Score: 31.187 bits (69), Expect = 1.502e-46
Identity = 14/20 (70.00%), Postives = 18/20 (90.00%), Query Frame = 1 
Query:  481 INGQVLSGEAELSELAQMSG 540
            IN +VLSGE EL+ELA+M+G
Sbjct:  344 INDKVLSGEIELAELAEMTG 363
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig2642 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TIN0_SOYBN1.269e-5878.20Putative uncharacterized protein OS=Glycine max PE... [more]
B9MX97_POPTR4.589e-4967.67Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9SXL1_RICCO8.466e-4863.91Putative uncharacterized protein OS=Ricinus commun... [more]
D7MC43_ARALY1.690e-4560.15Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q8L540_ARATH1.833e-4459.40Putative uncharacterized protein At4g35760 OS=Arab... [more]
Q8L9V9_ARATH1.833e-4459.40Putative uncharacterized protein OS=Arabidopsis th... [more]
O81807_ARATH1.838e-4460.15Putative uncharacterized protein AT4g35760 OS=Arab... [more]
A5C1X1_VITVI1.936e-4062.12Putative uncharacterized protein OS=Vitis vinifera... [more]
B4FGV5_MAIZE5.247e-3452.27Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
C5WZV6_SORBI1.155e-3352.27Putative uncharacterized protein Sb01g048220 OS=So... [more]
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BLAST of Pisum_sativum_v1_Contig2642 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G35760.11.502e-4659.40| Symbols: | NAD(P)H dehydrogenase (quinone)s | c... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 6..26
score: NAcoord: 58..68
score

Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig2642 ID=Pisum_sativum_v1_Contig2642; Name=Pisum_sativum_v1_Contig2642; organism=Pisum sativum; type=contig; length=540bp
ACATTCTAACCACAGCGTTCTCGGGATCATCTTGCTCATATTGTCTGCTT
TCAGTCCTCTTGTCATTTTCCTTATTTTTTATCACACTCAAGGACATTGG
ATTGCAAGAGAAGTTTAAACAACTCGGTTTGCAGTTGTTTATTGCTAGCT
TGGTGATTCTCACGCTGAACACCTCCTATAGCAGTGCAAAATCTGACTCC
TCAAGCGGGGCTAAAATTGATCTTCCATATTTTGCGACAGAGATTACAGC
TCCATCAAGCCCCTTTGCATTATCTCTAGCAAAGTATTTGCACTCCATAG
GAGCTAAAATGTATGGAGCTTTCTGGTGTTCACACTGTCTGGAACAAAAA
GAGATGTTTGGACGTGAGGCAGCCAAGCAATTGGAGTATGTGGAATGTTT
TCCTGACGGATTTCGAACAGGAACTAAAATGATCGATGCATGCATAGATG
CCAAAATAGAAGGTTTCCCTACATGGATTCATTAATGGCCAGGTTCTGAG
TGGTGAAGCAGAATTATCAGAGCTGGCACAAATGTCTGGT
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