Pisum_sativum_v1_Contig270

Contig Overview
NamePisum_sativum_v1_Contig270
Unique NamePisum_sativum_v1_Contig270
Typecontig
OrganismPisum sativum (pea)
Sequence length563
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
FG532041ESTFG532041:2..506 +
EX568926ESTEX568926:16..524 +
FG535622ESTFG535622:1..563 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
FG532041FG532041Pisum sativumEST
EX568926EX568926Pisum sativumEST
FG535622FG535622Pisum sativumEST


Homology
[Close]
BLAST of Pisum_sativum_v1_Contig270 vs. TrEMBL
Match: B9RMB1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1079020 PE=4 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.707e-30
Identity = 61/66 (92.42%), Postives = 64/66 (96.97%), Query Frame = 2 
Query:    5 HGSDAMVDEENCVFFLPHRPRSEIAELPFFLFMKGTGWCGAGADHYEPLIAHPSAYVSQEKVAVVL 202
            HGSDAMVDEENCVFFLPHRPRSEI ELPFFLFMKGTGWCGAGADHYEPLIAHPS++VS EKVA+VL
Sbjct:  277 HGSDAMVDEENCVFFLPHRPRSEICELPFFLFMKGTGWCGAGADHYEPLIAHPSSFVSNEKVALVL 342
[Close]
BLAST of Pisum_sativum_v1_Contig270 vs. TrEMBL
Match: B9GMN6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_814906 PE=4 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.485e-30
Identity = 61/68 (89.71%), Postives = 64/68 (94.12%), Query Frame = 2 
Query:    5 HGSDAMVDEENCVFFLPHRPRSEIAELPFFLFMKGTGWCGAGADHYEPLIAHPSAYVSQEKVAVVL*G 208
            HGSD MVDEENCVFFLPHRPRSEI E PFFLFMKGTGWCGAGADHYEPLIAHPS+++SQEKVAVVL G
Sbjct:  278 HGSDGMVDEENCVFFLPHRPRSEICEPPFFLFMKGTGWCGAGADHYEPLIAHPSSHLSQEKVAVVLGG 345
[Close]
BLAST of Pisum_sativum_v1_Contig270 vs. TrEMBL
Match: B9GZM0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_554746 PE=4 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.725e-28
Identity = 59/66 (89.39%), Postives = 61/66 (92.42%), Query Frame = 2 
Query:    5 HGSDAMVDEENCVFFLPHRPRSEIAELPFFLFMKGTGWCGAGADHYEPLIAHPSAYVSQEKVAVVL 202
            HGSDAMVDEENCVFFLPHRPR+EI E PFFLFMKGTGWCGAGADHYEPLIA PS+ VSQEKVA VL
Sbjct:  278 HGSDAMVDEENCVFFLPHRPRTEICEHPFFLFMKGTGWCGAGADHYEPLIAQPSSLVSQEKVAFVL 343
[Close]
BLAST of Pisum_sativum_v1_Contig270 vs. TrEMBL
Match: D7U5X8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_146.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000906001 PE=4 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.138e-27
Identity = 58/66 (87.88%), Postives = 59/66 (89.39%), Query Frame = 2 
Query:    5 HGSDAMVDEENCVFFLPHRPRSEIAELPFFLFMKGTGWCGAGADHYEPLIAHPSAYVSQEKVAVVL 202
            HGSDAMVDEENCVFFLPHRPR  I E PFFLFMKGTGW GAGADHYEPLIAHPS+ VSQEKVA VL
Sbjct:  128 HGSDAMVDEENCVFFLPHRPRGRICEPPFFLFMKGTGWSGAGADHYEPLIAHPSSAVSQEKVAWVL 193
[Close]
BLAST of Pisum_sativum_v1_Contig270 vs. TrEMBL
Match: A5BWC8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032094 PE=4 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.138e-27
Identity = 58/66 (87.88%), Postives = 59/66 (89.39%), Query Frame = 2 
Query:    5 HGSDAMVDEENCVFFLPHRPRSEIAELPFFLFMKGTGWCGAGADHYEPLIAHPSAYVSQEKVAVVL 202
            HGSDAMVDEENCVFFLPHRPR  I E PFFLFMKGTGW GAGADHYEPLIAHPS+ VSQEKVA VL
Sbjct:  276 HGSDAMVDEENCVFFLPHRPRGRICEPPFFLFMKGTGWSGAGADHYEPLIAHPSSAVSQEKVAWVL 341
[Close]
BLAST of Pisum_sativum_v1_Contig270 vs. TrEMBL
Match: Q9FYA0_ARATH (AT5g13100/T19L5_60 OS=Arabidopsis thaliana GN=T19L5_60 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.690e-26
Identity = 52/66 (78.79%), Postives = 59/66 (89.39%), Query Frame = 2 
Query:    5 HGSDAMVDEENCVFFLPHRPRSEIAELPFFLFMKGTGWCGAGADHYEPLIAHPSAYVSQEKVAVVL 202
            HGSD MV+EENCVFFLPH+PRSE+ E+P FLFMKGTGWCG GADHYEPLIA+PS  +S EKVA+VL
Sbjct:  289 HGSDGMVEEENCVFFLPHKPRSEVLEVPVFLFMKGTGWCGGGADHYEPLIANPSPLISHEKVALVL 354
[Close]
BLAST of Pisum_sativum_v1_Contig270 vs. TrEMBL
Match: D7M568_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_909262 PE=4 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.690e-26
Identity = 52/66 (78.79%), Postives = 59/66 (89.39%), Query Frame = 2 
Query:    5 HGSDAMVDEENCVFFLPHRPRSEIAELPFFLFMKGTGWCGAGADHYEPLIAHPSAYVSQEKVAVVL 202
            HGSD MV+EENCVFFLPH+PRSE+ E+P FLFMKGTGWCG GADHYEPLIA+PS  +S EKVA+VL
Sbjct:  289 HGSDGMVEEENCVFFLPHKPRSEVLEVPVFLFMKGTGWCGGGADHYEPLIANPSPLISHEKVALVL 354
[Close]
BLAST of Pisum_sativum_v1_Contig270 vs. TrEMBL
Match: D5ADM2_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.070e-24
Identity = 49/66 (74.24%), Postives = 58/66 (87.88%), Query Frame = 2 
Query:    5 HGSDAMVDEENCVFFLPHRPRSEIAELPFFLFMKGTGWCGAGADHYEPLIAHPSAYVSQEKVAVVL 202
            HG+DAM++++NCVFFLPH PR EI+  P FLFMKGTGWCGAGADHYEPLIA+P+  VSQ+K AVVL
Sbjct:  273 HGADAMIEDDNCVFFLPHCPRGEISYYPVFLFMKGTGWCGAGADHYEPLIAYPAPVVSQDKAAVVL 338
[Close]
BLAST of Pisum_sativum_v1_Contig270 vs. TrEMBL
Match: C5XF37_SORBI (Putative uncharacterized protein Sb03g009050 OS=Sorghum bicolor GN=Sb03g009050 PE=4 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.639e-23
Identity = 51/66 (77.27%), Postives = 55/66 (83.33%), Query Frame = 2 
Query:    5 HGSDAMVDEENCVFFLPHRPRSEIAELPFFLFMKGTGWCGAGADHYEPLIAHPSAYVSQEKVAVVL 202
            HG+DAMVDE+NCVFFLPHRPR EI E P FLFMKGT WCGAGADHYEPLIA    +V+ EK AVVL
Sbjct:  288 HGADAMVDEDNCVFFLPHRPRGEICEPPIFLFMKGTAWCGAGADHYEPLIATVLQHVTPEKAAVVL 353
[Close]
BLAST of Pisum_sativum_v1_Contig270 vs. TrEMBL
Match: C4J9T1_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.003e-22
Identity = 48/66 (72.73%), Postives = 55/66 (83.33%), Query Frame = 2 
Query:    5 HGSDAMVDEENCVFFLPHRPRSEIAELPFFLFMKGTGWCGAGADHYEPLIAHPSAYVSQEKVAVVL 202
            HG+DAMVDE+NCVFFLPHRPR E+ E P FLFMKGT WCGAGADHYEPLIA    +V+ +K AV+L
Sbjct:   60 HGADAMVDEDNCVFFLPHRPRGEVCEPPIFLFMKGTAWCGAGADHYEPLIATVLQHVTPDKAAVIL 125
[Close]
BLAST of Pisum_sativum_v1_Contig270 vs. TAIR peptide
Match: AT5G13100.1 (| Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:4156789-4158235 FORWARD LENGTH=354)

HSP 1 Score: 120.168 bits (300), Expect = 7.719e-28
Identity = 52/66 (78.79%), Postives = 59/66 (89.39%), Query Frame = 2 
Query:    5 HGSDAMVDEENCVFFLPHRPRSEIAELPFFLFMKGTGWCGAGADHYEPLIAHPSAYVSQEKVAVVL 202
            HGSD MV+EENCVFFLPH+PRSE+ E+P FLFMKGTGWCG GADHYEPLIA+PS  +S EKVA+VL
Sbjct:  289 HGSDGMVEEENCVFFLPHKPRSEVLEVPVFLFMKGTGWCGGGADHYEPLIANPSPLISHEKVALVL 354
The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig270 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9RMB1_RICCO1.707e-3092.42Putative uncharacterized protein OS=Ricinus commun... [more]
B9GMN6_POPTR6.485e-3089.71Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GZM0_POPTR2.725e-2889.39Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7U5X8_VITVI5.138e-2787.88Whole genome shotgun sequence of line PN40024, sca... [more]
A5BWC8_VITVI5.138e-2787.88Putative uncharacterized protein OS=Vitis vinifera... [more]
Q9FYA0_ARATH9.690e-2678.79AT5g13100/T19L5_60 OS=Arabidopsis thaliana GN=T19L... [more]
D7M568_ARALY9.690e-2678.79Putative uncharacterized protein OS=Arabidopsis ly... [more]
D5ADM2_PICSI9.070e-2474.24Putative uncharacterized protein OS=Picea sitchens... [more]
C5XF37_SORBI2.639e-2377.27Putative uncharacterized protein Sb03g009050 OS=So... [more]
C4J9T1_MAIZE1.003e-2272.73Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
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BLAST of Pisum_sativum_v1_Contig270 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G13100.17.719e-2878.79| Symbols: | unknown protein; Has 1807 Blast hits... [more]
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Sequences
The following sequences are available for this feature:

contig sequence

>Pisum_sativum_v1_Contig270 ID=Pisum_sativum_v1_Contig270; Name=Pisum_sativum_v1_Contig270; organism=Pisum sativum; type=contig; length=563bp
AGAGCATGGTTCAGATGCCATGGTTGATGAAGAAAATTGTGTGTTTTTCC
TTCCGCATCGTCCAAGGAGCGAAATTGCAGAACTTCCCTTTTTCCTTTTC
ATGAAAGGAACAGGTTGGTGTGGTGCTGGAGCTGACCACTATGAGCCCTT
GATCGCCCATCCTTCTGCCTATGTTTCACAAGAAAAGGTTGCTGTGGTAC
TGTGAGGCTTTTTAGCCTGCAATTTTGTGGAGTAGAGATTGAGTAGAATT
AGAGTTTCTCCAACATATTTATGGCCCCTTTAGAAATGTTCGGCAGCAAC
AATCTGGTTCTCCCAAGACTAGATTTGGTCCTGAAGAGTATCTCATTTTG
TTGCATTTATTTTGTTACTGACATTTAGATTCAATCATCTTTGACTCTTG
ACATTTGACAAGCAGGTATTGTCACCGGCCTCTGTTTTGTTGTTCATGTT
ATTGAGTTGATTAGAGAGGATTTTGTGCCATTTAGGTAGTGTGTTCTTCA
AATTGAAGAGTTCTTGTATCTCTGTGGATTTCGTCACTGTAATGAAGTGG
CTTATTTTCTGGT
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